Protein–RNA interactions for Protein: A6NMK7

CPSF4L, Putative cleavage and polyadenylation specificity factor subunit 4-like protein, humanhuman

Known RBP Predictions only

Length 179 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4LA6NMK7 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC1.97□□□□□ -2.09
CPSF4LA6NMK7 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC1.97□□□□□ -2.09
CPSF4LA6NMK7 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
CPSF4LA6NMK7 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC1.97□□□□□ -2.09
CPSF4LA6NMK7 BTF3P7-201ENST00000407097 488 ntBASIC1.97□□□□□ -2.09
CPSF4LA6NMK7 RNU6-603P-201ENST00000411403 107 ntBASIC1.97□□□□□ -2.09
CPSF4LA6NMK7 RPL19P1-201ENST00000411635 428 ntBASIC1.97□□□□□ -2.09
CPSF4LA6NMK7 USP9YP27-201ENST00000418455 438 ntBASIC1.97□□□□□ -2.09
CPSF4LA6NMK7 HSFY1P1-201ENST00000423928 1178 ntBASIC1.97□□□□□ -2.09
CPSF4LA6NMK7 AC092427.1-202ENST00000430569 476 ntBASIC1.97□□□□□ -2.09
CPSF4LA6NMK7 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC1.97□□□□□ -2.09
CPSF4LA6NMK7 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC1.97□□□□□ -2.09
CPSF4LA6NMK7 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC1.97□□□□□ -2.09
CPSF4LA6NMK7 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC1.97□□□□□ -2.09
CPSF4LA6NMK7 AL445669.2-201ENST00000454425 421 ntBASIC1.97□□□□□ -2.09
CPSF4LA6NMK7 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC1.97□□□□□ -2.09
CPSF4LA6NMK7 AL049873.1-201ENST00000480540 376 ntBASIC1.97□□□□□ -2.09
CPSF4LA6NMK7 TMEM248P1-201ENST00000510579 951 ntBASIC1.97□□□□□ -2.09
CPSF4LA6NMK7 AC034244.2-201ENST00000514668 858 ntBASIC1.97□□□□□ -2.09
CPSF4LA6NMK7 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC1.97□□□□□ -2.09
CPSF4LA6NMK7 RNA5SP200-201ENST00000516360 103 ntBASIC1.97□□□□□ -2.09
CPSF4LA6NMK7 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
CPSF4LA6NMK7 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC1.97□□□□□ -2.09
CPSF4LA6NMK7 AKIRIN1P1-201ENST00000547384 544 ntBASIC1.97□□□□□ -2.09
CPSF4LA6NMK7 AC087636.1-201ENST00000554787 573 ntTSL 4 BASIC1.97□□□□□ -2.09
CPSF4LA6NMK7 AC009097.3-201ENST00000563557 1018 ntBASIC1.97□□□□□ -2.09
CPSF4LA6NMK7 MIR4446-201ENST00000578505 67 ntBASIC1.97□□□□□ -2.09
CPSF4LA6NMK7 MIR3162-201ENST00000581818 82 ntBASIC1.97□□□□□ -2.09
CPSF4LA6NMK7 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC1.97□□□□□ -2.09
CPSF4LA6NMK7 AC011471.1-201ENST00000585766 187 ntBASIC1.97□□□□□ -2.09
CPSF4LA6NMK7 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC1.97□□□□□ -2.09
CPSF4LA6NMK7 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC1.97□□□□□ -2.09
CPSF4LA6NMK7 UBE2Q2P2-203ENST00000613592 761 ntBASIC1.97□□□□□ -2.09
CPSF4LA6NMK7 SNHG22-203ENST00000617833 660 ntBASIC1.97□□□□□ -2.09
CPSF4LA6NMK7 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
CPSF4LA6NMK7 CFTRP2-201ENST00000634304 199 ntBASIC1.97□□□□□ -2.09
CPSF4LA6NMK7 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC1.97□□□□□ -2.09
CPSF4LA6NMK7 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC1.96□□□□□ -2.1
CPSF4LA6NMK7 AC240504.1-201ENST00000395709 845 ntBASIC1.96□□□□□ -2.1
CPSF4LA6NMK7 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC1.96□□□□□ -2.1
CPSF4LA6NMK7 PTP4A1P7-201ENST00000423476 514 ntBASIC1.96□□□□□ -2.1
CPSF4LA6NMK7 AL138799.3-201ENST00000438968 350 ntBASIC1.96□□□□□ -2.1
CPSF4LA6NMK7 CASP3P1-201ENST00000446037 609 ntBASIC1.96□□□□□ -2.1
CPSF4LA6NMK7 AL031659.1-201ENST00000447075 539 ntBASIC1.96□□□□□ -2.1
CPSF4LA6NMK7 RPL23AP7-203ENST00000449021 469 ntBASIC1.96□□□□□ -2.1
CPSF4LA6NMK7 MYRFL-202ENST00000535034 881 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
CPSF4LA6NMK7 AC093014.1-201ENST00000548926 724 ntBASIC1.96□□□□□ -2.1
CPSF4LA6NMK7 MIR5002-201ENST00000584713 97 ntBASIC1.96□□□□□ -2.1
CPSF4LA6NMK7 AC123786.2-201ENST00000603459 275 ntBASIC1.96□□□□□ -2.1
CPSF4LA6NMK7 AL049779.4-201ENST00000604500 156 ntBASIC1.96□□□□□ -2.1
CPSF4LA6NMK7 VIS1.1-201ENST00000610517 203 ntBASIC1.96□□□□□ -2.1
CPSF4LA6NMK7 AC116447.1-201ENST00000613153 453 ntBASIC1.96□□□□□ -2.1
CPSF4LA6NMK7 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
CPSF4LA6NMK7 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC1.96□□□□□ -2.1
CPSF4LA6NMK7 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC1.95□□□□□ -2.1
CPSF4LA6NMK7 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC1.95□□□□□ -2.1
CPSF4LA6NMK7 RNA5SP160-201ENST00000364866 120 ntBASIC1.95□□□□□ -2.1
CPSF4LA6NMK7 SNORA48.3-201ENST00000391081 134 ntBASIC1.95□□□□□ -2.1
CPSF4LA6NMK7 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC1.95□□□□□ -2.1
CPSF4LA6NMK7 HMGB3P10-201ENST00000434734 572 ntBASIC1.95□□□□□ -2.1
CPSF4LA6NMK7 RAB9AP5-201ENST00000437794 597 ntBASIC1.95□□□□□ -2.1
CPSF4LA6NMK7 RAB9AP2-201ENST00000443911 597 ntBASIC1.95□□□□□ -2.1
CPSF4LA6NMK7 AL591719.1-201ENST00000444669 744 ntBASIC1.95□□□□□ -2.1
CPSF4LA6NMK7 AL118520.1-201ENST00000450770 291 ntBASIC1.95□□□□□ -2.1
CPSF4LA6NMK7 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC1.95□□□□□ -2.1
CPSF4LA6NMK7 AL021397.1-201ENST00000451806 248 ntBASIC1.95□□□□□ -2.1
CPSF4LA6NMK7 RNU6-717P-201ENST00000459076 104 ntBASIC1.95□□□□□ -2.1
CPSF4LA6NMK7 AC073901.1-201ENST00000462471 408 ntBASIC1.95□□□□□ -2.1
CPSF4LA6NMK7 AC090255.1-201ENST00000495779 349 ntBASIC1.95□□□□□ -2.1
CPSF4LA6NMK7 LINC01088-208ENST00000511895 795 ntTSL 2 BASIC1.95□□□□□ -2.1
CPSF4LA6NMK7 SCARNA16.3-201ENST00000516595 184 ntBASIC1.95□□□□□ -2.1
CPSF4LA6NMK7 AC103783.1-201ENST00000520506 373 ntBASIC1.95□□□□□ -2.1
CPSF4LA6NMK7 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC1.95□□□□□ -2.1
CPSF4LA6NMK7 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC1.95□□□□□ -2.1
CPSF4LA6NMK7 AC104115.2-201ENST00000523026 687 ntBASIC1.95□□□□□ -2.1
CPSF4LA6NMK7 AP003122.3-201ENST00000526316 255 ntBASIC1.95□□□□□ -2.1
CPSF4LA6NMK7 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC1.95□□□□□ -2.1
CPSF4LA6NMK7 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC1.95□□□□□ -2.1
CPSF4LA6NMK7 VN1R84P-201ENST00000593697 235 ntBASIC1.95□□□□□ -2.1
CPSF4LA6NMK7 RPL23AP88-201ENST00000605759 454 ntBASIC1.95□□□□□ -2.1
CPSF4LA6NMK7 AC016877.3-201ENST00000606778 504 ntBASIC1.95□□□□□ -2.1
CPSF4LA6NMK7 AC092159.4-201ENST00000624944 550 ntBASIC1.95□□□□□ -2.1
CPSF4LA6NMK7 AL118496.1-201ENST00000440201 1812 ntBASIC1.95□□□□□ -2.1
CPSF4LA6NMK7 AC009313.2-201ENST00000417893 1941 ntBASIC1.95□□□□□ -2.1
CPSF4LA6NMK7 MTCO1P6-201ENST00000481192 1384 ntBASIC1.95□□□□□ -2.1
CPSF4LA6NMK7 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
CPSF4LA6NMK7 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
CPSF4LA6NMK7 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC1.94□□□□□ -2.1
CPSF4LA6NMK7 RPL21P75-201ENST00000396599 483 ntBASIC1.94□□□□□ -2.1
CPSF4LA6NMK7 RPL21P28-201ENST00000401418 483 ntBASIC1.94□□□□□ -2.1
CPSF4LA6NMK7 AL592114.1-201ENST00000403842 483 ntBASIC1.94□□□□□ -2.1
CPSF4LA6NMK7 HMGB1P13-201ENST00000406019 642 ntBASIC1.94□□□□□ -2.1
CPSF4LA6NMK7 RNU2-37P-201ENST00000410695 177 ntBASIC1.94□□□□□ -2.1
CPSF4LA6NMK7 AC023128.2-201ENST00000420880 1223 ntBASIC1.94□□□□□ -2.1
CPSF4LA6NMK7 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC1.94□□□□□ -2.1
CPSF4LA6NMK7 MTCO3P30-201ENST00000426425 670 ntBASIC1.94□□□□□ -2.1
CPSF4LA6NMK7 SDR42E1P3-201ENST00000438345 502 ntBASIC1.94□□□□□ -2.1
CPSF4LA6NMK7 AL035551.1-201ENST00000446931 348 ntBASIC1.94□□□□□ -2.1
CPSF4LA6NMK7 RNU7-157P-201ENST00000459600 66 ntBASIC1.94□□□□□ -2.1
CPSF4LA6NMK7 RPL21P39-201ENST00000463605 483 ntBASIC1.94□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 165.8 ms