Protein–RNA interactions for Protein: A6NGU7

LINC01546, Putative uncharacterized protein encoded by LINC01546, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01546A6NGU7 AL358832.1-201ENST00000497800 389 ntBASIC1.55□□□□□ -2.16
LINC01546A6NGU7 RNA5SP341-201ENST00000516261 117 ntBASIC1.55□□□□□ -2.16
LINC01546A6NGU7 RNA5SP24-201ENST00000516478 95 ntBASIC1.55□□□□□ -2.16
LINC01546A6NGU7 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC1.55□□□□□ -2.16
LINC01546A6NGU7 SERPINE4P-201ENST00000554978 281 ntBASIC1.55□□□□□ -2.16
LINC01546A6NGU7 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC1.55□□□□□ -2.16
LINC01546A6NGU7 AC009314.1-201ENST00000603871 304 ntBASIC1.55□□□□□ -2.16
LINC01546A6NGU7 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC1.55□□□□□ -2.16
LINC01546A6NGU7 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC1.55□□□□□ -2.16
LINC01546A6NGU7 AC002064.3-201ENST00000623448 346 ntBASIC1.55□□□□□ -2.16
LINC01546A6NGU7 AC079597.1-201ENST00000624306 508 ntBASIC1.55□□□□□ -2.16
LINC01546A6NGU7 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC1.55□□□□□ -2.16
LINC01546A6NGU7 OR8B1P-202ENST00000641132 1178 ntBASIC1.55□□□□□ -2.16
LINC01546A6NGU7 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.55□□□□□ -2.16
LINC01546A6NGU7 RUFY2-201ENST00000265865 2033 ntTSL 2 BASIC1.55□□□□□ -2.16
LINC01546A6NGU7 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC1.54□□□□□ -2.16
LINC01546A6NGU7 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.54□□□□□ -2.16
LINC01546A6NGU7 SNORA67.4-201ENST00000384688 142 ntBASIC1.54□□□□□ -2.16
LINC01546A6NGU7 RNVU1-14-201ENST00000384770 164 ntBASIC1.54□□□□□ -2.16
LINC01546A6NGU7 PRELID3BP11-201ENST00000414230 479 ntBASIC1.54□□□□□ -2.16
LINC01546A6NGU7 AJ239321.1-201ENST00000424255 564 ntBASIC1.54□□□□□ -2.16
LINC01546A6NGU7 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC1.54□□□□□ -2.16
LINC01546A6NGU7 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC1.54□□□□□ -2.16
LINC01546A6NGU7 AC092013.1-201ENST00000438795 332 ntBASIC1.54□□□□□ -2.16
LINC01546A6NGU7 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC1.54□□□□□ -2.16
LINC01546A6NGU7 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC1.54□□□□□ -2.16
LINC01546A6NGU7 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC1.54□□□□□ -2.16
LINC01546A6NGU7 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC1.54□□□□□ -2.16
LINC01546A6NGU7 MTCO2P9-201ENST00000503214 694 ntBASIC1.54□□□□□ -2.16
LINC01546A6NGU7 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC1.54□□□□□ -2.16
LINC01546A6NGU7 ACTR6P1-201ENST00000514311 1104 ntBASIC1.54□□□□□ -2.16
LINC01546A6NGU7 LINC01603-201ENST00000517343 1134 ntTSL 2 BASIC1.54□□□□□ -2.16
LINC01546A6NGU7 MTCO1P47-201ENST00000523889 1271 ntBASIC1.54□□□□□ -2.16
LINC01546A6NGU7 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC1.54□□□□□ -2.16
LINC01546A6NGU7 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
LINC01546A6NGU7 ANP32BP3-201ENST00000559213 706 ntBASIC1.54□□□□□ -2.16
LINC01546A6NGU7 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC1.54□□□□□ -2.16
LINC01546A6NGU7 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC1.54□□□□□ -2.16
LINC01546A6NGU7 AC007014.1-201ENST00000572828 610 ntTSL 3 BASIC1.54□□□□□ -2.16
LINC01546A6NGU7 AC005412.1-201ENST00000580812 1049 ntBASIC1.54□□□□□ -2.16
LINC01546A6NGU7 AL513314.2-206ENST00000617276 434 ntTSL 5 BASIC1.54□□□□□ -2.16
LINC01546A6NGU7 RBM12B-AS1-201ENST00000623283 653 ntBASIC1.54□□□□□ -2.16
LINC01546A6NGU7 AC092608.2-201ENST00000624427 218 ntBASIC1.54□□□□□ -2.16
LINC01546A6NGU7 AC016717.3-201ENST00000624730 554 ntBASIC1.54□□□□□ -2.16
LINC01546A6NGU7 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC1.54□□□□□ -2.16
LINC01546A6NGU7 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC1.54□□□□□ -2.16
LINC01546A6NGU7 FTO-223ENST00000640179 210 ntTSL 5 BASIC1.54□□□□□ -2.16
LINC01546A6NGU7 AC104446.1-201ENST00000613728 1321 ntBASIC1.54□□□□□ -2.16
LINC01546A6NGU7 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC1.54□□□□□ -2.16
LINC01546A6NGU7 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC1.54□□□□□ -2.16
LINC01546A6NGU7 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC1.53□□□□□ -2.16
LINC01546A6NGU7 SNORA6-201ENST00000384033 151 ntBASIC1.53□□□□□ -2.16
LINC01546A6NGU7 SNORA44-201ENST00000384584 132 ntBASIC1.53□□□□□ -2.16
LINC01546A6NGU7 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC1.53□□□□□ -2.16
LINC01546A6NGU7 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC1.53□□□□□ -2.16
LINC01546A6NGU7 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC1.53□□□□□ -2.16
LINC01546A6NGU7 PSMA2P3-201ENST00000429685 675 ntBASIC1.53□□□□□ -2.16
LINC01546A6NGU7 AC092427.1-202ENST00000430569 476 ntBASIC1.53□□□□□ -2.16
LINC01546A6NGU7 HMGB3P10-201ENST00000434734 572 ntBASIC1.53□□□□□ -2.16
LINC01546A6NGU7 C4orf45-201ENST00000434826 1215 ntAPPRIS P1 TSL 2 BASIC1.53□□□□□ -2.16
LINC01546A6NGU7 CBWD4P-201ENST00000445695 655 ntBASIC1.53□□□□□ -2.16
LINC01546A6NGU7 AC034228.3-201ENST00000446275 562 ntTSL 3 BASIC1.53□□□□□ -2.16
LINC01546A6NGU7 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
LINC01546A6NGU7 AL035551.1-201ENST00000446931 348 ntBASIC1.53□□□□□ -2.16
LINC01546A6NGU7 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC1.53□□□□□ -2.16
LINC01546A6NGU7 SNORD109B-201ENST00000458961 67 ntBASIC1.53□□□□□ -2.16
LINC01546A6NGU7 SNORD109A-201ENST00000459128 67 ntBASIC1.53□□□□□ -2.16
LINC01546A6NGU7 AC090515.1-201ENST00000465295 476 ntBASIC1.53□□□□□ -2.16
LINC01546A6NGU7 Z99496.1-201ENST00000469424 1477 ntBASIC1.53□□□□□ -2.16
LINC01546A6NGU7 RPL31P13-201ENST00000484151 370 ntBASIC1.53□□□□□ -2.16
LINC01546A6NGU7 RN7SL274P-201ENST00000492268 272 ntBASIC1.53□□□□□ -2.16
LINC01546A6NGU7 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC1.53□□□□□ -2.16
LINC01546A6NGU7 ENSA-210ENST00000503241 574 ntTSL 3 BASIC1.53□□□□□ -2.16
LINC01546A6NGU7 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC1.53□□□□□ -2.16
LINC01546A6NGU7 SETP12-201ENST00000514068 805 ntBASIC1.53□□□□□ -2.16
LINC01546A6NGU7 RNA5SP364-201ENST00000516938 78 ntBASIC1.53□□□□□ -2.16
LINC01546A6NGU7 MAL2-205ENST00000521048 575 ntTSL 4 BASIC1.53□□□□□ -2.16
LINC01546A6NGU7 IGHVIII-38-1-201ENST00000521454 282 ntBASIC1.53□□□□□ -2.16
LINC01546A6NGU7 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC1.53□□□□□ -2.16
LINC01546A6NGU7 AC021269.2-201ENST00000532318 330 ntBASIC1.53□□□□□ -2.16
LINC01546A6NGU7 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC1.53□□□□□ -2.16
LINC01546A6NGU7 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC1.53□□□□□ -2.16
LINC01546A6NGU7 AC090970.1-201ENST00000561207 381 ntTSL 5 BASIC1.53□□□□□ -2.16
LINC01546A6NGU7 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
LINC01546A6NGU7 AL161734.1-201ENST00000609720 557 ntBASIC1.53□□□□□ -2.16
LINC01546A6NGU7 VN1R74P-201ENST00000613259 503 ntBASIC1.53□□□□□ -2.16
LINC01546A6NGU7 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC1.53□□□□□ -2.16
LINC01546A6NGU7 PSMD5-AS1-215ENST00000640622 205 ntBASIC1.53□□□□□ -2.16
LINC01546A6NGU7 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC1.53□□□□□ -2.17
LINC01546A6NGU7 AL109809.4-201ENST00000603520 2185 ntBASIC1.52□□□□□ -2.17
LINC01546A6NGU7 AC097714.1-201ENST00000511272 1647 ntBASIC1.52□□□□□ -2.17
LINC01546A6NGU7 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.52□□□□□ -2.17
LINC01546A6NGU7 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC1.52□□□□□ -2.17
LINC01546A6NGU7 AL512646.1-201ENST00000269395 1077 ntBASIC1.52□□□□□ -2.17
LINC01546A6NGU7 AL050305.1-201ENST00000399993 1230 ntBASIC1.52□□□□□ -2.17
LINC01546A6NGU7 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
LINC01546A6NGU7 U3.40-201ENST00000408706 208 ntBASIC1.52□□□□□ -2.17
LINC01546A6NGU7 GLS-203ENST00000409215 632 ntTSL 4 BASIC1.52□□□□□ -2.17
LINC01546A6NGU7 AC069157.1-201ENST00000421749 137 ntBASIC1.52□□□□□ -2.17
LINC01546A6NGU7 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC1.52□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 121.7 ms