Protein–RNA interactions for Protein: A0A087WSZ9

TRAV30, T-cell receptor alpha variable 30 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV30A0A087WSZ9 MIR8057-201ENST00000620957 69 ntBASIC2.13□□□□□ -2.07
TRAV30A0A087WSZ9 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
TRAV30A0A087WSZ9 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
TRAV30A0A087WSZ9 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
TRAV30A0A087WSZ9 MAPK10-266ENST00000641066 6555 ntBASIC2.13□□□□□ -2.07
TRAV30A0A087WSZ9 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC2.13□□□□□ -2.07
TRAV30A0A087WSZ9 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
TRAV30A0A087WSZ9 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC2.12□□□□□ -2.07
TRAV30A0A087WSZ9 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.12□□□□□ -2.07
TRAV30A0A087WSZ9 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC2.12□□□□□ -2.07
TRAV30A0A087WSZ9 RNVU1-3-201ENST00000364313 161 ntBASIC2.12□□□□□ -2.07
TRAV30A0A087WSZ9 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC2.12□□□□□ -2.07
TRAV30A0A087WSZ9 AL137014.1-201ENST00000420490 1226 ntBASIC2.12□□□□□ -2.07
TRAV30A0A087WSZ9 AL645937.1-202ENST00000421799 937 ntBASIC2.12□□□□□ -2.07
TRAV30A0A087WSZ9 PSMA2P3-201ENST00000429685 675 ntBASIC2.12□□□□□ -2.07
TRAV30A0A087WSZ9 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC2.12□□□□□ -2.07
TRAV30A0A087WSZ9 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC2.12□□□□□ -2.07
TRAV30A0A087WSZ9 ELOCP13-201ENST00000443934 329 ntBASIC2.12□□□□□ -2.07
TRAV30A0A087WSZ9 AC044797.1-201ENST00000445744 679 ntBASIC2.12□□□□□ -2.07
TRAV30A0A087WSZ9 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC2.12□□□□□ -2.07
TRAV30A0A087WSZ9 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC2.12□□□□□ -2.07
TRAV30A0A087WSZ9 AC126182.1-201ENST00000478134 357 ntBASIC2.12□□□□□ -2.07
TRAV30A0A087WSZ9 AC126121.1-201ENST00000482313 553 ntBASIC2.12□□□□□ -2.07
TRAV30A0A087WSZ9 VN1R104P-201ENST00000505115 1009 ntBASIC2.12□□□□□ -2.07
TRAV30A0A087WSZ9 RNA5SP341-201ENST00000516261 117 ntBASIC2.12□□□□□ -2.07
TRAV30A0A087WSZ9 AC087808.1-201ENST00000520501 361 ntBASIC2.12□□□□□ -2.07
TRAV30A0A087WSZ9 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC2.12□□□□□ -2.07
TRAV30A0A087WSZ9 AC010620.2-201ENST00000600135 313 ntBASIC2.12□□□□□ -2.07
TRAV30A0A087WSZ9 AL137843.1-201ENST00000605078 385 ntBASIC2.12□□□□□ -2.07
TRAV30A0A087WSZ9 AC015849.6-201ENST00000605454 474 ntBASIC2.12□□□□□ -2.07
TRAV30A0A087WSZ9 AC093732.2-201ENST00000607950 274 ntBASIC2.12□□□□□ -2.07
TRAV30A0A087WSZ9 BX664608.1-201ENST00000610519 487 ntBASIC2.12□□□□□ -2.07
TRAV30A0A087WSZ9 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC2.12□□□□□ -2.07
TRAV30A0A087WSZ9 AC006329.2-201ENST00000611491 394 ntBASIC2.12□□□□□ -2.07
TRAV30A0A087WSZ9 AC010809.3-201ENST00000621310 641 ntBASIC2.12□□□□□ -2.07
TRAV30A0A087WSZ9 LINC02341-201ENST00000637043 824 ntTSL 3 BASIC2.12□□□□□ -2.07
TRAV30A0A087WSZ9 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.12□□□□□ -2.07
TRAV30A0A087WSZ9 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.12□□□□□ -2.07
TRAV30A0A087WSZ9 ZNF807-201ENST00000328088 1707 ntBASIC2.11□□□□□ -2.07
TRAV30A0A087WSZ9 Z82209.1-201ENST00000422141 2135 ntBASIC2.11□□□□□ -2.07
TRAV30A0A087WSZ9 ANKRD36BP1-201ENST00000358576 1779 ntBASIC2.11□□□□□ -2.07
TRAV30A0A087WSZ9 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC2.11□□□□□ -2.07
TRAV30A0A087WSZ9 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
TRAV30A0A087WSZ9 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.11□□□□□ -2.07
TRAV30A0A087WSZ9 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC2.11□□□□□ -2.07
TRAV30A0A087WSZ9 RNA5SP139-201ENST00000364340 117 ntBASIC2.11□□□□□ -2.07
TRAV30A0A087WSZ9 MIR627-201ENST00000384979 97 ntBASIC2.11□□□□□ -2.07
TRAV30A0A087WSZ9 PIGP-204ENST00000399102 688 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
TRAV30A0A087WSZ9 ERMN-204ENST00000409925 556 ntTSL 4 BASIC2.11□□□□□ -2.07
TRAV30A0A087WSZ9 RN7SKP27-201ENST00000410684 333 ntBASIC2.11□□□□□ -2.07
TRAV30A0A087WSZ9 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC2.11□□□□□ -2.07
TRAV30A0A087WSZ9 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC2.11□□□□□ -2.07
TRAV30A0A087WSZ9 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC2.11□□□□□ -2.07
TRAV30A0A087WSZ9 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC2.11□□□□□ -2.07
TRAV30A0A087WSZ9 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.11□□□□□ -2.07
TRAV30A0A087WSZ9 LINC02529-201ENST00000429657 772 ntTSL 3 BASIC2.11□□□□□ -2.07
TRAV30A0A087WSZ9 AC112653.1-201ENST00000443851 386 ntBASIC2.11□□□□□ -2.07
TRAV30A0A087WSZ9 RPL37P4-201ENST00000448908 268 ntBASIC2.11□□□□□ -2.07
TRAV30A0A087WSZ9 TPMTP4-201ENST00000450749 678 ntBASIC2.11□□□□□ -2.07
TRAV30A0A087WSZ9 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC2.11□□□□□ -2.07
TRAV30A0A087WSZ9 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC2.11□□□□□ -2.07
TRAV30A0A087WSZ9 SRIP1-201ENST00000489235 288 ntBASIC2.11□□□□□ -2.07
TRAV30A0A087WSZ9 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC2.11□□□□□ -2.07
TRAV30A0A087WSZ9 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC2.11□□□□□ -2.07
TRAV30A0A087WSZ9 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.11□□□□□ -2.07
TRAV30A0A087WSZ9 SUB1P1-201ENST00000524415 382 ntBASIC2.11□□□□□ -2.07
TRAV30A0A087WSZ9 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC2.11□□□□□ -2.07
TRAV30A0A087WSZ9 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC2.11□□□□□ -2.07
TRAV30A0A087WSZ9 AC022080.3-201ENST00000544433 482 ntBASIC2.11□□□□□ -2.07
TRAV30A0A087WSZ9 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC2.11□□□□□ -2.07
TRAV30A0A087WSZ9 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC2.11□□□□□ -2.07
TRAV30A0A087WSZ9 MIR5694-201ENST00000581190 76 ntBASIC2.11□□□□□ -2.07
TRAV30A0A087WSZ9 MIR5092-201ENST00000583139 88 ntBASIC2.11□□□□□ -2.07
TRAV30A0A087WSZ9 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC2.11□□□□□ -2.07
TRAV30A0A087WSZ9 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.11□□□□□ -2.07
TRAV30A0A087WSZ9 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.11□□□□□ -2.07
TRAV30A0A087WSZ9 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
TRAV30A0A087WSZ9 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.11□□□□□ -2.07
TRAV30A0A087WSZ9 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.11□□□□□ -2.07
TRAV30A0A087WSZ9 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC2.11□□□□□ -2.07
TRAV30A0A087WSZ9 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
TRAV30A0A087WSZ9 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC2.1□□□□□ -2.07
TRAV30A0A087WSZ9 TAB3P1-202ENST00000452645 1634 ntBASIC2.1□□□□□ -2.07
TRAV30A0A087WSZ9 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC2.1□□□□□ -2.07
TRAV30A0A087WSZ9 OR5H2-201ENST00000355273 945 ntBASIC2.1□□□□□ -2.07
TRAV30A0A087WSZ9 RNA5SP21-201ENST00000410917 96 ntBASIC2.1□□□□□ -2.07
TRAV30A0A087WSZ9 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC2.1□□□□□ -2.07
TRAV30A0A087WSZ9 AC087499.2-201ENST00000432861 149 ntBASIC2.1□□□□□ -2.07
TRAV30A0A087WSZ9 MRPL50P4-201ENST00000446432 475 ntBASIC2.1□□□□□ -2.07
TRAV30A0A087WSZ9 AC009495.2-201ENST00000457108 506 ntTSL 2 BASIC2.1□□□□□ -2.07
TRAV30A0A087WSZ9 AC010301.1-201ENST00000473936 355 ntBASIC2.1□□□□□ -2.07
TRAV30A0A087WSZ9 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC2.1□□□□□ -2.07
TRAV30A0A087WSZ9 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC2.1□□□□□ -2.07
TRAV30A0A087WSZ9 AC010374.2-201ENST00000512933 535 ntBASIC2.1□□□□□ -2.07
TRAV30A0A087WSZ9 HIGD1AP18-201ENST00000520730 278 ntBASIC2.1□□□□□ -2.07
TRAV30A0A087WSZ9 AHI1-217ENST00000534469 680 ntTSL 3 BASIC2.1□□□□□ -2.07
TRAV30A0A087WSZ9 PRELID2P1-201ENST00000552837 301 ntBASIC2.1□□□□□ -2.07
TRAV30A0A087WSZ9 AL121603.1-201ENST00000553815 142 ntBASIC2.1□□□□□ -2.07
TRAV30A0A087WSZ9 AC012409.1-202ENST00000558449 639 ntTSL 2 BASIC2.1□□□□□ -2.07
TRAV30A0A087WSZ9 MIR4325-201ENST00000583049 90 ntBASIC2.1□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 95.6 ms