Protein–RNA interactions for Protein: Q9Y4P1

ATG4B, Cysteine protease ATG4B, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4BQ9Y4P1 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
ATG4BQ9Y4P1 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.41□□□□□ -1.86
ATG4BQ9Y4P1 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.41□□□□□ -1.86
ATG4BQ9Y4P1 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC3.41□□□□□ -1.86
ATG4BQ9Y4P1 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
ATG4BQ9Y4P1 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
ATG4BQ9Y4P1 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
ATG4BQ9Y4P1 NACA3P-201ENST00000359690 648 ntBASIC3.41□□□□□ -1.86
ATG4BQ9Y4P1 RNU6-989P-201ENST00000362756 107 ntBASIC3.41□□□□□ -1.86
ATG4BQ9Y4P1 RNA5SP42-201ENST00000364278 115 ntBASIC3.41□□□□□ -1.86
ATG4BQ9Y4P1 SNORA72.3-201ENST00000365074 132 ntBASIC3.41□□□□□ -1.86
ATG4BQ9Y4P1 SNORD6-201ENST00000365444 73 ntBASIC3.41□□□□□ -1.86
ATG4BQ9Y4P1 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC3.41□□□□□ -1.86
ATG4BQ9Y4P1 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC3.41□□□□□ -1.86
ATG4BQ9Y4P1 RNU6-629P-201ENST00000384061 103 ntBASIC3.41□□□□□ -1.86
ATG4BQ9Y4P1 MIR670-201ENST00000390142 98 ntBASIC3.41□□□□□ -1.86
ATG4BQ9Y4P1 RNU2-71P-201ENST00000411395 189 ntBASIC3.41□□□□□ -1.86
ATG4BQ9Y4P1 PTP4A1P5-201ENST00000420305 455 ntBASIC3.41□□□□□ -1.86
ATG4BQ9Y4P1 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC3.41□□□□□ -1.86
ATG4BQ9Y4P1 MRPS36P1-201ENST00000421291 307 ntBASIC3.41□□□□□ -1.86
ATG4BQ9Y4P1 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC3.41□□□□□ -1.86
ATG4BQ9Y4P1 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC3.41□□□□□ -1.86
ATG4BQ9Y4P1 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC3.41□□□□□ -1.86
ATG4BQ9Y4P1 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC3.41□□□□□ -1.86
ATG4BQ9Y4P1 MTCYBP11-201ENST00000447254 1109 ntBASIC3.41□□□□□ -1.86
ATG4BQ9Y4P1 OFD1P7Y-201ENST00000454643 1155 ntBASIC3.41□□□□□ -1.86
ATG4BQ9Y4P1 CEACAMP4-201ENST00000457676 421 ntBASIC3.41□□□□□ -1.86
ATG4BQ9Y4P1 RPL9P32-201ENST00000464118 620 ntBASIC3.41□□□□□ -1.86
ATG4BQ9Y4P1 VN1R17P-201ENST00000472048 1090 ntBASIC3.41□□□□□ -1.86
ATG4BQ9Y4P1 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC3.41□□□□□ -1.86
ATG4BQ9Y4P1 MTCO3P35-201ENST00000485582 781 ntBASIC3.41□□□□□ -1.86
ATG4BQ9Y4P1 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC3.41□□□□□ -1.86
ATG4BQ9Y4P1 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC3.41□□□□□ -1.86
ATG4BQ9Y4P1 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC3.41□□□□□ -1.86
ATG4BQ9Y4P1 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC3.41□□□□□ -1.86
ATG4BQ9Y4P1 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC3.41□□□□□ -1.86
ATG4BQ9Y4P1 AC026403.1-201ENST00000518938 295 ntBASIC3.41□□□□□ -1.86
ATG4BQ9Y4P1 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
ATG4BQ9Y4P1 AC025437.3-201ENST00000523178 771 ntTSL 5 BASIC3.41□□□□□ -1.86
ATG4BQ9Y4P1 OR5AP1P-201ENST00000529730 940 ntBASIC3.41□□□□□ -1.86
ATG4BQ9Y4P1 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC3.41□□□□□ -1.86
ATG4BQ9Y4P1 GTF2IP22-201ENST00000554443 182 ntBASIC3.41□□□□□ -1.86
ATG4BQ9Y4P1 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC3.41□□□□□ -1.86
ATG4BQ9Y4P1 RPP40P2-201ENST00000603596 712 ntBASIC3.41□□□□□ -1.86
ATG4BQ9Y4P1 SNORA51-201ENST00000606420 132 ntBASIC3.41□□□□□ -1.86
ATG4BQ9Y4P1 AC103710.3-201ENST00000608157 948 ntBASIC3.41□□□□□ -1.86
ATG4BQ9Y4P1 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC3.41□□□□□ -1.86
ATG4BQ9Y4P1 AC024257.5-201ENST00000612739 531 ntBASIC3.41□□□□□ -1.86
ATG4BQ9Y4P1 AC005332.6-201ENST00000613178 446 ntBASIC3.41□□□□□ -1.86
ATG4BQ9Y4P1 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC3.41□□□□□ -1.86
ATG4BQ9Y4P1 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
ATG4BQ9Y4P1 AC007823.1-201ENST00000569932 1566 ntBASIC3.41□□□□□ -1.86
ATG4BQ9Y4P1 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
ATG4BQ9Y4P1 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
ATG4BQ9Y4P1 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
ATG4BQ9Y4P1 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC3.41□□□□□ -1.86
ATG4BQ9Y4P1 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
ATG4BQ9Y4P1 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.4□□□□□ -1.86
ATG4BQ9Y4P1 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
ATG4BQ9Y4P1 SNORD9-201ENST00000362566 104 ntBASIC3.4□□□□□ -1.87
ATG4BQ9Y4P1 RNA5SP258-201ENST00000362750 119 ntBASIC3.4□□□□□ -1.87
ATG4BQ9Y4P1 RNU5D-1-201ENST00000363299 116 ntBASIC3.4□□□□□ -1.87
ATG4BQ9Y4P1 RNU6-263P-201ENST00000363811 107 ntBASIC3.4□□□□□ -1.87
ATG4BQ9Y4P1 RNU4-68P-201ENST00000364314 141 ntBASIC3.4□□□□□ -1.87
ATG4BQ9Y4P1 SNORD82-201ENST00000365530 70 ntBASIC3.4□□□□□ -1.87
ATG4BQ9Y4P1 ATP5A1P2-201ENST00000412323 255 ntBASIC3.4□□□□□ -1.87
ATG4BQ9Y4P1 MTATP6P20-201ENST00000414147 562 ntBASIC3.4□□□□□ -1.87
ATG4BQ9Y4P1 RPS7P15-201ENST00000415804 584 ntBASIC3.4□□□□□ -1.87
ATG4BQ9Y4P1 MTCO3P12-201ENST00000416718 547 ntBASIC3.4□□□□□ -1.87
ATG4BQ9Y4P1 AC099677.1-201ENST00000420575 175 ntBASIC3.4□□□□□ -1.87
ATG4BQ9Y4P1 VDAC1P3-201ENST00000434069 851 ntBASIC3.4□□□□□ -1.87
ATG4BQ9Y4P1 USP9YP24-201ENST00000434374 697 ntBASIC3.4□□□□□ -1.87
ATG4BQ9Y4P1 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
ATG4BQ9Y4P1 HMGB1P12-201ENST00000438594 598 ntBASIC3.4□□□□□ -1.87
ATG4BQ9Y4P1 USP9YP17-201ENST00000444617 696 ntBASIC3.4□□□□□ -1.87
ATG4BQ9Y4P1 AL589880.1-201ENST00000448271 287 ntBASIC3.4□□□□□ -1.87
ATG4BQ9Y4P1 RPS3AP46-201ENST00000448352 682 ntBASIC3.4□□□□□ -1.87
ATG4BQ9Y4P1 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC3.4□□□□□ -1.87
ATG4BQ9Y4P1 ZNF886P-201ENST00000450781 723 ntBASIC3.4□□□□□ -1.87
ATG4BQ9Y4P1 MTCO3P16-201ENST00000454456 754 ntBASIC3.4□□□□□ -1.87
ATG4BQ9Y4P1 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC3.4□□□□□ -1.87
ATG4BQ9Y4P1 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC3.4□□□□□ -1.87
ATG4BQ9Y4P1 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC3.4□□□□□ -1.87
ATG4BQ9Y4P1 RANP9-201ENST00000519957 271 ntBASIC3.4□□□□□ -1.87
ATG4BQ9Y4P1 IGKV2D-19-201ENST00000523346 262 ntBASIC3.4□□□□□ -1.87
ATG4BQ9Y4P1 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC3.4□□□□□ -1.87
ATG4BQ9Y4P1 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC3.4□□□□□ -1.87
ATG4BQ9Y4P1 AC125611.1-201ENST00000549563 229 ntBASIC3.4□□□□□ -1.87
ATG4BQ9Y4P1 AL121603.1-201ENST00000553815 142 ntBASIC3.4□□□□□ -1.87
ATG4BQ9Y4P1 AL132857.1-201ENST00000555180 708 ntBASIC3.4□□□□□ -1.87
ATG4BQ9Y4P1 AC074050.1-201ENST00000563247 211 ntBASIC3.4□□□□□ -1.87
ATG4BQ9Y4P1 AC023813.2-201ENST00000564321 469 ntBASIC3.4□□□□□ -1.87
ATG4BQ9Y4P1 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
ATG4BQ9Y4P1 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC3.4□□□□□ -1.87
ATG4BQ9Y4P1 MTND1P8-201ENST00000571424 950 ntBASIC3.4□□□□□ -1.87
ATG4BQ9Y4P1 MIR5047-201ENST00000579212 100 ntBASIC3.4□□□□□ -1.87
ATG4BQ9Y4P1 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.4□□□□□ -1.87
ATG4BQ9Y4P1 MTND3P19-201ENST00000603825 345 ntBASIC3.4□□□□□ -1.87
ATG4BQ9Y4P1 AC128687.1-201ENST00000605304 619 ntBASIC3.4□□□□□ -1.87
ATG4BQ9Y4P1 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC3.4□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 95.9 ms