Protein–RNA interactions for Protein: Q9UM47

NOTCH3, Neurogenic locus notch homolog protein 3, humanhuman

Predictions only

Length 2,321 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3Q9UM47 HIGD1AP17-201ENST00000554576 276 ntBASIC3.25□□□□□ -1.89
NOTCH3Q9UM47 HMGB1P33-201ENST00000563485 527 ntBASIC3.25□□□□□ -1.89
NOTCH3Q9UM47 COX6CP4-201ENST00000605798 228 ntBASIC3.25□□□□□ -1.89
NOTCH3Q9UM47 AL592494.3-201ENST00000609485 464 ntBASIC3.25□□□□□ -1.89
NOTCH3Q9UM47 MESTIT1_2.1-201ENST00000616328 235 ntBASIC3.25□□□□□ -1.89
NOTCH3Q9UM47 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC3.25□□□□□ -1.89
NOTCH3Q9UM47 AL139089.1-201ENST00000620372 975 ntBASIC3.25□□□□□ -1.89
NOTCH3Q9UM47 7SK.10-201ENST00000621414 298 ntBASIC3.25□□□□□ -1.89
NOTCH3Q9UM47 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
NOTCH3Q9UM47 AC008013.2-202ENST00000637965 364 ntBASIC3.25□□□□□ -1.89
NOTCH3Q9UM47 AP005901.5-201ENST00000545779 1796 ntBASIC3.25□□□□□ -1.89
NOTCH3Q9UM47 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC3.25□□□□□ -1.89
NOTCH3Q9UM47 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC3.24□□□□□ -1.89
NOTCH3Q9UM47 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
NOTCH3Q9UM47 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.24□□□□□ -1.89
NOTCH3Q9UM47 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC3.24□□□□□ -1.89
NOTCH3Q9UM47 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
NOTCH3Q9UM47 MIR200C-201ENST00000384980 68 ntBASIC3.24□□□□□ -1.89
NOTCH3Q9UM47 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
NOTCH3Q9UM47 RN7SKP235-201ENST00000410662 305 ntBASIC3.24□□□□□ -1.89
NOTCH3Q9UM47 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC3.24□□□□□ -1.89
NOTCH3Q9UM47 RPL21P43-201ENST00000425440 472 ntBASIC3.24□□□□□ -1.89
NOTCH3Q9UM47 OR5AW1P-201ENST00000426334 1006 ntBASIC3.24□□□□□ -1.89
NOTCH3Q9UM47 RPL23AP76-201ENST00000441860 458 ntBASIC3.24□□□□□ -1.89
NOTCH3Q9UM47 USP9YP15-201ENST00000442391 422 ntBASIC3.24□□□□□ -1.89
NOTCH3Q9UM47 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC3.24□□□□□ -1.89
NOTCH3Q9UM47 COX6CP12-201ENST00000446748 202 ntBASIC3.24□□□□□ -1.89
NOTCH3Q9UM47 AC007967.1-201ENST00000455422 1159 ntBASIC3.24□□□□□ -1.89
NOTCH3Q9UM47 RPS29P25-201ENST00000481709 171 ntBASIC3.24□□□□□ -1.89
NOTCH3Q9UM47 RPL39P36-201ENST00000490784 156 ntBASIC3.24□□□□□ -1.89
NOTCH3Q9UM47 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC3.24□□□□□ -1.89
NOTCH3Q9UM47 FGF7P4-201ENST00000509595 295 ntBASIC3.24□□□□□ -1.89
NOTCH3Q9UM47 RNA5SP519-201ENST00000516480 119 ntBASIC3.24□□□□□ -1.89
NOTCH3Q9UM47 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC3.24□□□□□ -1.89
NOTCH3Q9UM47 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC3.24□□□□□ -1.89
NOTCH3Q9UM47 CYCSP28-201ENST00000534284 321 ntBASIC3.24□□□□□ -1.89
NOTCH3Q9UM47 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC3.24□□□□□ -1.89
NOTCH3Q9UM47 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC3.24□□□□□ -1.89
NOTCH3Q9UM47 AP001429.1-201ENST00000602568 530 ntBASIC3.24□□□□□ -1.89
NOTCH3Q9UM47 AC130352.1-201ENST00000602979 661 ntBASIC3.24□□□□□ -1.89
NOTCH3Q9UM47 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC3.24□□□□□ -1.89
NOTCH3Q9UM47 AL357559.1-201ENST00000622228 274 ntBASIC3.24□□□□□ -1.89
NOTCH3Q9UM47 ATE1-AS1-202ENST00000636460 506 ntBASIC3.24□□□□□ -1.89
NOTCH3Q9UM47 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC3.24□□□□□ -1.89
NOTCH3Q9UM47 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
NOTCH3Q9UM47 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC3.24□□□□□ -1.89
NOTCH3Q9UM47 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
NOTCH3Q9UM47 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
NOTCH3Q9UM47 AP000756.2-201ENST00000624168 2567 ntBASIC3.24□□□□□ -1.89
NOTCH3Q9UM47 MTND5P1-201ENST00000445440 1375 ntBASIC3.24□□□□□ -1.89
NOTCH3Q9UM47 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
NOTCH3Q9UM47 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC3.24□□□□□ -1.89
NOTCH3Q9UM47 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
NOTCH3Q9UM47 AC006504.1-201ENST00000562493 3666 ntBASIC3.24□□□□□ -1.89
NOTCH3Q9UM47 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC3.24□□□□□ -1.89
NOTCH3Q9UM47 AC092162.3-201ENST00000624511 1624 ntBASIC3.24□□□□□ -1.89
NOTCH3Q9UM47 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC3.24□□□□□ -1.89
NOTCH3Q9UM47 Y_RNA.160-201ENST00000363677 92 ntBASIC3.24□□□□□ -1.89
NOTCH3Q9UM47 RNU6-1279P-201ENST00000383917 103 ntBASIC3.24□□□□□ -1.89
NOTCH3Q9UM47 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
NOTCH3Q9UM47 FCF1P2-201ENST00000415284 583 ntBASIC3.24□□□□□ -1.89
NOTCH3Q9UM47 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC3.24□□□□□ -1.89
NOTCH3Q9UM47 PNRC2P1-201ENST00000423940 420 ntBASIC3.24□□□□□ -1.89
NOTCH3Q9UM47 AL445584.1-201ENST00000431451 330 ntBASIC3.24□□□□□ -1.89
NOTCH3Q9UM47 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC3.24□□□□□ -1.89
NOTCH3Q9UM47 AL451074.3-201ENST00000437709 472 ntBASIC3.24□□□□□ -1.89
NOTCH3Q9UM47 RPS29P7-201ENST00000439662 171 ntBASIC3.24□□□□□ -1.89
NOTCH3Q9UM47 RPL21P89-201ENST00000444021 467 ntBASIC3.24□□□□□ -1.89
NOTCH3Q9UM47 AC012671.1-201ENST00000451912 203 ntBASIC3.24□□□□□ -1.89
NOTCH3Q9UM47 FAM172BP-201ENST00000487497 1089 ntBASIC3.24□□□□□ -1.89
NOTCH3Q9UM47 RPL7P24-201ENST00000493052 752 ntBASIC3.24□□□□□ -1.89
NOTCH3Q9UM47 AC017037.1-201ENST00000508460 471 ntBASIC3.24□□□□□ -1.89
NOTCH3Q9UM47 SNORA31.13-201ENST00000516624 135 ntBASIC3.24□□□□□ -1.89
NOTCH3Q9UM47 PAICSP4-201ENST00000517543 1253 ntBASIC3.24□□□□□ -1.89
NOTCH3Q9UM47 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC3.24□□□□□ -1.89
NOTCH3Q9UM47 AC034268.2-201ENST00000571784 482 ntBASIC3.24□□□□□ -1.89
NOTCH3Q9UM47 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC3.24□□□□□ -1.89
NOTCH3Q9UM47 AP001269.1-201ENST00000592820 528 ntTSL 4 BASIC3.24□□□□□ -1.89
NOTCH3Q9UM47 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC3.24□□□□□ -1.89
NOTCH3Q9UM47 AL391261.4-201ENST00000616012 481 ntBASIC3.24□□□□□ -1.89
NOTCH3Q9UM47 AC007546.1-201ENST00000619452 559 ntBASIC3.24□□□□□ -1.89
NOTCH3Q9UM47 AL359880.1-201ENST00000621879 266 ntBASIC3.24□□□□□ -1.89
NOTCH3Q9UM47 AC007546.2-201ENST00000623996 360 ntBASIC3.24□□□□□ -1.89
NOTCH3Q9UM47 AC120349.2-201ENST00000625002 298 ntBASIC3.24□□□□□ -1.89
NOTCH3Q9UM47 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC3.23□□□□□ -1.89
NOTCH3Q9UM47 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC3.23□□□□□ -1.89
NOTCH3Q9UM47 MTCO1P9-201ENST00000505577 1534 ntBASIC3.23□□□□□ -1.89
NOTCH3Q9UM47 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC3.23□□□□□ -1.89
NOTCH3Q9UM47 AL449283.1-201ENST00000602631 3403 ntBASIC3.23□□□□□ -1.89
NOTCH3Q9UM47 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
NOTCH3Q9UM47 RNA5SP124-201ENST00000362739 110 ntBASIC3.23□□□□□ -1.89
NOTCH3Q9UM47 RNU1-20P-201ENST00000363314 162 ntBASIC3.23□□□□□ -1.89
NOTCH3Q9UM47 RNY3P3-201ENST00000363816 102 ntBASIC3.23□□□□□ -1.89
NOTCH3Q9UM47 RNU6-931P-201ENST00000363850 107 ntBASIC3.23□□□□□ -1.89
NOTCH3Q9UM47 Y_RNA.356-201ENST00000365475 113 ntBASIC3.23□□□□□ -1.89
NOTCH3Q9UM47 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC3.23□□□□□ -1.89
NOTCH3Q9UM47 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC3.23□□□□□ -1.89
NOTCH3Q9UM47 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC3.23□□□□□ -1.89
NOTCH3Q9UM47 MT-TR-201ENST00000387439 65 ntBASIC3.23□□□□□ -1.89
NOTCH3Q9UM47 CALM2P3-201ENST00000400429 449 ntBASIC3.23□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 84.9 ms