Protein–RNA interactions for Protein: Q9P1Y6

PHRF1, PHD and RING finger domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 1,649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1Q9P1Y6 AC061975.8-201ENST00000587058 721 ntBASIC3.18□□□□□ -1.9
PHRF1Q9P1Y6 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC3.18□□□□□ -1.9
PHRF1Q9P1Y6 AL136981.2-201ENST00000617319 734 ntBASIC3.18□□□□□ -1.9
PHRF1Q9P1Y6 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
PHRF1Q9P1Y6 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC3.17□□□□□ -1.9
PHRF1Q9P1Y6 GSTA9P-201ENST00000406231 611 ntBASIC3.17□□□□□ -1.9
PHRF1Q9P1Y6 AL513175.2-201ENST00000422071 443 ntBASIC3.17□□□□□ -1.9
PHRF1Q9P1Y6 AL357520.1-201ENST00000441557 453 ntBASIC3.17□□□□□ -1.9
PHRF1Q9P1Y6 AL162388.1-201ENST00000450912 352 ntBASIC3.17□□□□□ -1.9
PHRF1Q9P1Y6 AC106872.3-201ENST00000495104 446 ntBASIC3.17□□□□□ -1.9
PHRF1Q9P1Y6 RN7SKP282-201ENST00000516824 299 ntBASIC3.17□□□□□ -1.9
PHRF1Q9P1Y6 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC3.17□□□□□ -1.9
PHRF1Q9P1Y6 AC018630.1-201ENST00000541376 925 ntBASIC3.17□□□□□ -1.9
PHRF1Q9P1Y6 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC3.17□□□□□ -1.9
PHRF1Q9P1Y6 MIR5007-201ENST00000583098 95 ntBASIC3.17□□□□□ -1.9
PHRF1Q9P1Y6 AC067747.1-201ENST00000608026 250 ntBASIC3.17□□□□□ -1.9
PHRF1Q9P1Y6 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC3.17□□□□□ -1.9
PHRF1Q9P1Y6 SNORA41-201ENST00000384675 132 ntBASIC3.16□□□□□ -1.9
PHRF1Q9P1Y6 ATG3P1-201ENST00000419507 911 ntBASIC3.16□□□□□ -1.9
PHRF1Q9P1Y6 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC3.16□□□□□ -1.9
PHRF1Q9P1Y6 RPL23AP49-201ENST00000492925 468 ntBASIC3.16□□□□□ -1.9
PHRF1Q9P1Y6 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC3.16□□□□□ -1.9
PHRF1Q9P1Y6 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC3.16□□□□□ -1.9
PHRF1Q9P1Y6 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC3.16□□□□□ -1.9
PHRF1Q9P1Y6 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC3.16□□□□□ -1.9
PHRF1Q9P1Y6 RN7SKP219-201ENST00000516825 296 ntBASIC3.16□□□□□ -1.9
PHRF1Q9P1Y6 PIH1D2-208ENST00000532211 1103 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
PHRF1Q9P1Y6 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC3.16□□□□□ -1.9
PHRF1Q9P1Y6 MIR6845-201ENST00000613182 61 ntBASIC3.16□□□□□ -1.9
PHRF1Q9P1Y6 AL353997.5-201ENST00000618886 171 ntBASIC3.16□□□□□ -1.9
PHRF1Q9P1Y6 ATP8A2P3-201ENST00000426792 1536 ntBASIC3.16□□□□□ -1.9
PHRF1Q9P1Y6 OR5AQ1P-203ENST00000641818 1529 ntBASIC3.16□□□□□ -1.9
PHRF1Q9P1Y6 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC3.16□□□□□ -1.9
PHRF1Q9P1Y6 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
PHRF1Q9P1Y6 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC3.15□□□□□ -1.9
PHRF1Q9P1Y6 AL591416.1-201ENST00000404015 867 ntBASIC3.15□□□□□ -1.9
PHRF1Q9P1Y6 Z98742.2-201ENST00000431564 187 ntBASIC3.15□□□□□ -1.9
PHRF1Q9P1Y6 GAPDHP27-201ENST00000447427 1020 ntBASIC3.15□□□□□ -1.9
PHRF1Q9P1Y6 TRBV1-201ENST00000476502 284 ntBASIC3.15□□□□□ -1.9
PHRF1Q9P1Y6 AC108860.1-201ENST00000484521 383 ntBASIC3.15□□□□□ -1.9
PHRF1Q9P1Y6 MTCO3P13-201ENST00000577757 781 ntBASIC3.15□□□□□ -1.9
PHRF1Q9P1Y6 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC3.15□□□□□ -1.9
PHRF1Q9P1Y6 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC3.15□□□□□ -1.9
PHRF1Q9P1Y6 AC103710.2-201ENST00000609912 942 ntBASIC3.15□□□□□ -1.9
PHRF1Q9P1Y6 Z99496.1-201ENST00000469424 1477 ntBASIC3.15□□□□□ -1.9
PHRF1Q9P1Y6 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC3.15□□□□□ -1.9
PHRF1Q9P1Y6 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC3.15□□□□□ -1.91
PHRF1Q9P1Y6 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC3.15□□□□□ -1.91
PHRF1Q9P1Y6 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
PHRF1Q9P1Y6 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
PHRF1Q9P1Y6 PNPT1P2-201ENST00000456768 2050 ntBASIC3.15□□□□□ -1.91
PHRF1Q9P1Y6 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
PHRF1Q9P1Y6 RN7SKP44-201ENST00000363602 316 ntBASIC3.15□□□□□ -1.91
PHRF1Q9P1Y6 UQCRFS1P3-201ENST00000407697 385 ntBASIC3.15□□□□□ -1.91
PHRF1Q9P1Y6 AC104090.1-201ENST00000506341 1171 ntBASIC3.15□□□□□ -1.91
PHRF1Q9P1Y6 ZDHHC20P3-201ENST00000531576 336 ntBASIC3.15□□□□□ -1.91
PHRF1Q9P1Y6 HMGB3P26-201ENST00000560051 582 ntBASIC3.15□□□□□ -1.91
PHRF1Q9P1Y6 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC3.15□□□□□ -1.91
PHRF1Q9P1Y6 AP001004.1-201ENST00000582468 324 ntBASIC3.15□□□□□ -1.91
PHRF1Q9P1Y6 EXOC5P1-201ENST00000510543 1969 ntBASIC3.15□□□□□ -1.91
PHRF1Q9P1Y6 AC092326.2-201ENST00000624772 1561 ntBASIC3.14□□□□□ -1.91
PHRF1Q9P1Y6 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
PHRF1Q9P1Y6 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
PHRF1Q9P1Y6 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
PHRF1Q9P1Y6 AC107081.1-201ENST00000414975 361 ntBASIC3.14□□□□□ -1.91
PHRF1Q9P1Y6 AC010881.1-201ENST00000433830 235 ntBASIC3.14□□□□□ -1.91
PHRF1Q9P1Y6 AL024509.2-201ENST00000493462 493 ntBASIC3.14□□□□□ -1.91
PHRF1Q9P1Y6 AP001086.1-201ENST00000494882 321 ntBASIC3.14□□□□□ -1.91
PHRF1Q9P1Y6 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC3.14□□□□□ -1.91
PHRF1Q9P1Y6 AC112673.1-201ENST00000513168 575 ntBASIC3.14□□□□□ -1.91
PHRF1Q9P1Y6 C11orf65-206ENST00000529391 973 ntAPPRIS P1 TSL 2 BASIC3.14□□□□□ -1.91
PHRF1Q9P1Y6 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC3.14□□□□□ -1.91
PHRF1Q9P1Y6 AC025281.1-201ENST00000567026 265 ntBASIC3.14□□□□□ -1.91
PHRF1Q9P1Y6 BX664608.1-201ENST00000610519 487 ntBASIC3.14□□□□□ -1.91
PHRF1Q9P1Y6 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC3.14□□□□□ -1.91
PHRF1Q9P1Y6 MIR6766-201ENST00000622641 72 ntBASIC3.14□□□□□ -1.91
PHRF1Q9P1Y6 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
PHRF1Q9P1Y6 AC002543.1-201ENST00000299783 1954 ntBASIC3.14□□□□□ -1.91
PHRF1Q9P1Y6 CUL1P1-201ENST00000509510 2425 ntBASIC3.14□□□□□ -1.91
PHRF1Q9P1Y6 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
PHRF1Q9P1Y6 AC093775.1-201ENST00000624154 1868 ntBASIC3.13□□□□□ -1.91
PHRF1Q9P1Y6 SNORD88.1-201ENST00000408684 91 ntBASIC3.13□□□□□ -1.91
PHRF1Q9P1Y6 AC099677.4-201ENST00000446786 380 ntTSL 3 BASIC3.13□□□□□ -1.91
PHRF1Q9P1Y6 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC3.13□□□□□ -1.91
PHRF1Q9P1Y6 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC3.13□□□□□ -1.91
PHRF1Q9P1Y6 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC3.13□□□□□ -1.91
PHRF1Q9P1Y6 AP000942.3-201ENST00000603702 160 ntBASIC3.13□□□□□ -1.91
PHRF1Q9P1Y6 MIR6733-201ENST00000635723 61 ntBASIC3.13□□□□□ -1.91
PHRF1Q9P1Y6 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
PHRF1Q9P1Y6 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
PHRF1Q9P1Y6 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
PHRF1Q9P1Y6 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC3.12□□□□□ -1.91
PHRF1Q9P1Y6 SNORD21-201ENST00000383953 95 ntBASIC3.12□□□□□ -1.91
PHRF1Q9P1Y6 SNORA64-201ENST00000384674 134 ntBASIC3.12□□□□□ -1.91
PHRF1Q9P1Y6 MTCO2P17-201ENST00000424336 677 ntBASIC3.12□□□□□ -1.91
PHRF1Q9P1Y6 RPL7P52-201ENST00000449200 742 ntBASIC3.12□□□□□ -1.91
PHRF1Q9P1Y6 RPL36AP33-201ENST00000450395 310 ntBASIC3.12□□□□□ -1.91
PHRF1Q9P1Y6 RPL21P71-201ENST00000465598 459 ntBASIC3.12□□□□□ -1.91
PHRF1Q9P1Y6 MTCYBP20-201ENST00000524239 1129 ntBASIC3.12□□□□□ -1.91
PHRF1Q9P1Y6 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC3.12□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 127.6 ms