Protein–RNA interactions for Protein: Q9NQI0

DDX4, Probable ATP-dependent RNA helicase DDX4, humanhuman

Known RBP Predictions only

Length 724 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX4Q9NQI0 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.24□□□□□ -1.73
DDX4Q9NQI0 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC4.24□□□□□ -1.73
DDX4Q9NQI0 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
DDX4Q9NQI0 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
DDX4Q9NQI0 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
DDX4Q9NQI0 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
DDX4Q9NQI0 Y_RNA.25-201ENST00000362528 102 ntBASIC4.24□□□□□ -1.73
DDX4Q9NQI0 Y_RNA.169-201ENST00000363745 96 ntBASIC4.24□□□□□ -1.73
DDX4Q9NQI0 RNU6-931P-201ENST00000363850 107 ntBASIC4.24□□□□□ -1.73
DDX4Q9NQI0 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
DDX4Q9NQI0 DSTNP4-201ENST00000399472 474 ntBASIC4.24□□□□□ -1.73
DDX4Q9NQI0 LAP3P1-201ENST00000403648 294 ntBASIC4.24□□□□□ -1.73
DDX4Q9NQI0 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC4.24□□□□□ -1.73
DDX4Q9NQI0 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC4.24□□□□□ -1.73
DDX4Q9NQI0 HSFY4P-201ENST00000415994 1181 ntBASIC4.24□□□□□ -1.73
DDX4Q9NQI0 BX842559.1-201ENST00000419615 532 ntBASIC4.24□□□□□ -1.73
DDX4Q9NQI0 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC4.24□□□□□ -1.73
DDX4Q9NQI0 AC017083.1-201ENST00000428093 483 ntBASIC4.24□□□□□ -1.73
DDX4Q9NQI0 AL365396.1-201ENST00000430854 671 ntBASIC4.24□□□□□ -1.73
DDX4Q9NQI0 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC4.24□□□□□ -1.73
DDX4Q9NQI0 RSL24D1P3-201ENST00000449255 495 ntBASIC4.24□□□□□ -1.73
DDX4Q9NQI0 AC115115.1-201ENST00000449927 248 ntBASIC4.24□□□□□ -1.73
DDX4Q9NQI0 RAD51AP1P1-201ENST00000484195 1001 ntBASIC4.24□□□□□ -1.73
DDX4Q9NQI0 AC026427.2-201ENST00000506228 536 ntBASIC4.24□□□□□ -1.73
DDX4Q9NQI0 AC105313.1-201ENST00000509121 353 ntBASIC4.24□□□□□ -1.73
DDX4Q9NQI0 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC4.24□□□□□ -1.73
DDX4Q9NQI0 RNA5SP154-201ENST00000516193 111 ntBASIC4.24□□□□□ -1.73
DDX4Q9NQI0 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC4.24□□□□□ -1.73
DDX4Q9NQI0 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
DDX4Q9NQI0 AC091515.1-201ENST00000548110 679 ntBASIC4.24□□□□□ -1.73
DDX4Q9NQI0 AC008015.1-201ENST00000555505 465 ntBASIC4.24□□□□□ -1.73
DDX4Q9NQI0 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC4.24□□□□□ -1.73
DDX4Q9NQI0 CASC16-202ENST00000563844 610 ntTSL 3 BASIC4.24□□□□□ -1.73
DDX4Q9NQI0 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC4.24□□□□□ -1.73
DDX4Q9NQI0 MIR5186-201ENST00000577504 120 ntBASIC4.24□□□□□ -1.73
DDX4Q9NQI0 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC4.24□□□□□ -1.73
DDX4Q9NQI0 AC013444.2-201ENST00000603317 787 ntBASIC4.24□□□□□ -1.73
DDX4Q9NQI0 BRDTP1-201ENST00000605735 677 ntBASIC4.24□□□□□ -1.73
DDX4Q9NQI0 uc_338.32-201ENST00000615087 172 ntBASIC4.24□□□□□ -1.73
DDX4Q9NQI0 MIR6864-201ENST00000617935 70 ntBASIC4.24□□□□□ -1.73
DDX4Q9NQI0 AC026422.1-201ENST00000623961 452 ntBASIC4.24□□□□□ -1.73
DDX4Q9NQI0 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC4.24□□□□□ -1.73
DDX4Q9NQI0 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC4.24□□□□□ -1.73
DDX4Q9NQI0 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC4.24□□□□□ -1.73
DDX4Q9NQI0 AC095050.2-201ENST00000510748 1458 ntBASIC4.24□□□□□ -1.73
DDX4Q9NQI0 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
DDX4Q9NQI0 BDP1P-201ENST00000582658 1990 ntBASIC4.23□□□□□ -1.73
DDX4Q9NQI0 AL133383.2-201ENST00000622958 2336 ntBASIC4.23□□□□□ -1.73
DDX4Q9NQI0 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
DDX4Q9NQI0 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
DDX4Q9NQI0 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
DDX4Q9NQI0 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
DDX4Q9NQI0 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
DDX4Q9NQI0 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
DDX4Q9NQI0 MIR153-1-201ENST00000384914 90 ntBASIC4.23□□□□□ -1.73
DDX4Q9NQI0 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC4.23□□□□□ -1.73
DDX4Q9NQI0 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC4.23□□□□□ -1.73
DDX4Q9NQI0 AL365203.2-201ENST00000423444 196 ntBASIC4.23□□□□□ -1.73
DDX4Q9NQI0 AC008065.1-201ENST00000428525 348 ntBASIC4.23□□□□□ -1.73
DDX4Q9NQI0 AC005326.1-201ENST00000429197 123 ntBASIC4.23□□□□□ -1.73
DDX4Q9NQI0 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC4.23□□□□□ -1.73
DDX4Q9NQI0 MTND5P2-201ENST00000442927 1142 ntBASIC4.23□□□□□ -1.73
DDX4Q9NQI0 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC4.23□□□□□ -1.73
DDX4Q9NQI0 MTND2P22-201ENST00000444325 1033 ntBASIC4.23□□□□□ -1.73
DDX4Q9NQI0 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC4.23□□□□□ -1.73
DDX4Q9NQI0 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC4.23□□□□□ -1.73
DDX4Q9NQI0 MTCO3P11-201ENST00000455103 774 ntBASIC4.23□□□□□ -1.73
DDX4Q9NQI0 AC099563.1-201ENST00000456086 418 ntBASIC4.23□□□□□ -1.73
DDX4Q9NQI0 AP000893.1-201ENST00000474462 794 ntBASIC4.23□□□□□ -1.73
DDX4Q9NQI0 LINC00888-204ENST00000487386 421 ntBASIC4.23□□□□□ -1.73
DDX4Q9NQI0 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC4.23□□□□□ -1.73
DDX4Q9NQI0 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC4.23□□□□□ -1.73
DDX4Q9NQI0 RPF2P2-201ENST00000504693 896 ntBASIC4.23□□□□□ -1.73
DDX4Q9NQI0 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC4.23□□□□□ -1.73
DDX4Q9NQI0 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC4.23□□□□□ -1.73
DDX4Q9NQI0 HNRNPKP5-201ENST00000515300 253 ntBASIC4.23□□□□□ -1.73
DDX4Q9NQI0 TBCA-206ENST00000518338 551 ntTSL 2 BASIC4.23□□□□□ -1.73
DDX4Q9NQI0 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC4.23□□□□□ -1.73
DDX4Q9NQI0 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC4.23□□□□□ -1.73
DDX4Q9NQI0 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC4.23□□□□□ -1.73
DDX4Q9NQI0 UBE2NP1-201ENST00000545592 458 ntBASIC4.23□□□□□ -1.73
DDX4Q9NQI0 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC4.23□□□□□ -1.73
DDX4Q9NQI0 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC4.23□□□□□ -1.73
DDX4Q9NQI0 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC4.23□□□□□ -1.73
DDX4Q9NQI0 EIF5A2P1-201ENST00000564027 460 ntBASIC4.23□□□□□ -1.73
DDX4Q9NQI0 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC4.23□□□□□ -1.73
DDX4Q9NQI0 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC4.23□□□□□ -1.73
DDX4Q9NQI0 MIR8058-201ENST00000615737 89 ntBASIC4.23□□□□□ -1.73
DDX4Q9NQI0 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
DDX4Q9NQI0 AC009237.17-201ENST00000618111 748 ntBASIC4.23□□□□□ -1.73
DDX4Q9NQI0 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC4.23□□□□□ -1.73
DDX4Q9NQI0 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
DDX4Q9NQI0 KPNA2P2-201ENST00000419546 1489 ntBASIC4.23□□□□□ -1.73
DDX4Q9NQI0 AL390862.1-201ENST00000635467 1469 ntBASIC4.23□□□□□ -1.73
DDX4Q9NQI0 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
DDX4Q9NQI0 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC4.23□□□□□ -1.73
DDX4Q9NQI0 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
DDX4Q9NQI0 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
DDX4Q9NQI0 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
DDX4Q9NQI0 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC4.22□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 125.6 ms