Protein–RNA interactions for Protein: Q9NP77

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, humanhuman

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72Q9NP77 ZFPM2-AS1-201ENST00000509144 542 ntTSL 3 BASIC5.27□□□□□ -1.57
SSU72Q9NP77 AC017037.2-201ENST00000513850 890 ntBASIC5.27□□□□□ -1.57
SSU72Q9NP77 AC006427.1-201ENST00000514359 712 ntBASIC5.27□□□□□ -1.57
SSU72Q9NP77 RN7SKP295-201ENST00000517264 153 ntBASIC5.27□□□□□ -1.57
SSU72Q9NP77 CYCSP22-201ENST00000517555 339 ntBASIC5.27□□□□□ -1.57
SSU72Q9NP77 MTND4P7-201ENST00000523876 130 ntBASIC5.27□□□□□ -1.57
SSU72Q9NP77 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC5.27□□□□□ -1.57
SSU72Q9NP77 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC5.27□□□□□ -1.57
SSU72Q9NP77 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC5.27□□□□□ -1.57
SSU72Q9NP77 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC5.27□□□□□ -1.57
SSU72Q9NP77 AC079905.1-201ENST00000549280 475 ntBASIC5.27□□□□□ -1.57
SSU72Q9NP77 AC092078.2-201ENST00000560900 581 ntTSL 4 BASIC5.27□□□□□ -1.57
SSU72Q9NP77 AC009087.1-201ENST00000561827 369 ntTSL 3 BASIC5.27□□□□□ -1.57
SSU72Q9NP77 MRPS21P7-201ENST00000566937 238 ntBASIC5.27□□□□□ -1.57
SSU72Q9NP77 LYRM1-208ENST00000567954 460 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
SSU72Q9NP77 AC005341.1-201ENST00000571086 708 ntBASIC5.27□□□□□ -1.57
SSU72Q9NP77 MIR4790-201ENST00000577799 79 ntBASIC5.27□□□□□ -1.57
SSU72Q9NP77 MIR4675-201ENST00000577898 77 ntBASIC5.27□□□□□ -1.57
SSU72Q9NP77 COX6CP3-201ENST00000580869 223 ntBASIC5.27□□□□□ -1.57
SSU72Q9NP77 AC011477.5-201ENST00000586571 259 ntBASIC5.27□□□□□ -1.57
SSU72Q9NP77 AC104662.1-201ENST00000604448 511 ntBASIC5.27□□□□□ -1.57
SSU72Q9NP77 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC5.27□□□□□ -1.57
SSU72Q9NP77 AC098657.3-201ENST00000620434 263 ntBASIC5.27□□□□□ -1.57
SSU72Q9NP77 AC024884.1-201ENST00000620583 399 ntBASIC5.27□□□□□ -1.57
SSU72Q9NP77 AC091046.3-201ENST00000631455 1574 ntBASIC5.27□□□□□ -1.57
SSU72Q9NP77 AC119674.1-207ENST00000641355 633 ntBASIC5.27□□□□□ -1.57
SSU72Q9NP77 OR52H1-202ENST00000641796 1061 ntBASIC5.27□□□□□ -1.57
SSU72Q9NP77 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC5.27□□□□□ -1.57
SSU72Q9NP77 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
SSU72Q9NP77 PROS2P-201ENST00000474651 1951 ntBASIC5.27□□□□□ -1.57
SSU72Q9NP77 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC5.27□□□□□ -1.57
SSU72Q9NP77 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
SSU72Q9NP77 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC5.27□□□□□ -1.57
SSU72Q9NP77 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC5.26□□□□□ -1.57
SSU72Q9NP77 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC5.26□□□□□ -1.57
SSU72Q9NP77 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC5.26□□□□□ -1.57
SSU72Q9NP77 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
SSU72Q9NP77 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
SSU72Q9NP77 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
SSU72Q9NP77 MTND5P10-201ENST00000603719 1809 ntBASIC5.26□□□□□ -1.57
SSU72Q9NP77 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
SSU72Q9NP77 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC5.26□□□□□ -1.57
SSU72Q9NP77 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
SSU72Q9NP77 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC5.26□□□□□ -1.57
SSU72Q9NP77 RN7SKP257-201ENST00000364525 309 ntBASIC5.26□□□□□ -1.57
SSU72Q9NP77 CISD1P1-201ENST00000393907 327 ntBASIC5.26□□□□□ -1.57
SSU72Q9NP77 AL139397.2-201ENST00000404529 772 ntBASIC5.26□□□□□ -1.57
SSU72Q9NP77 RNU2-21P-201ENST00000410368 188 ntBASIC5.26□□□□□ -1.57
SSU72Q9NP77 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC5.26□□□□□ -1.57
SSU72Q9NP77 AC114491.1-201ENST00000416095 246 ntBASIC5.26□□□□□ -1.57
SSU72Q9NP77 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC5.26□□□□□ -1.57
SSU72Q9NP77 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC5.26□□□□□ -1.57
SSU72Q9NP77 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC5.26□□□□□ -1.57
SSU72Q9NP77 TRAPPC2P5-201ENST00000426293 308 ntBASIC5.26□□□□□ -1.57
SSU72Q9NP77 AL160004.2-201ENST00000432935 350 ntBASIC5.26□□□□□ -1.57
SSU72Q9NP77 AL359265.2-201ENST00000434367 631 ntBASIC5.26□□□□□ -1.57
SSU72Q9NP77 AL451139.1-201ENST00000434718 346 ntBASIC5.26□□□□□ -1.57
SSU72Q9NP77 AL161722.2-201ENST00000434731 981 ntBASIC5.26□□□□□ -1.57
SSU72Q9NP77 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC5.26□□□□□ -1.57
SSU72Q9NP77 RPL7AP61-201ENST00000443410 636 ntBASIC5.26□□□□□ -1.57
SSU72Q9NP77 GAPDHP25-201ENST00000447061 1001 ntBASIC5.26□□□□□ -1.57
SSU72Q9NP77 AL158835.1-204ENST00000449693 371 ntTSL 3 BASIC5.26□□□□□ -1.57
SSU72Q9NP77 AC022431.1-201ENST00000450941 438 ntBASIC5.26□□□□□ -1.57
SSU72Q9NP77 AC108059.3-201ENST00000456388 214 ntBASIC5.26□□□□□ -1.57
SSU72Q9NP77 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC5.26□□□□□ -1.57
SSU72Q9NP77 Y_RNA.653-201ENST00000459091 95 ntBASIC5.26□□□□□ -1.57
SSU72Q9NP77 RN7SL72P-201ENST00000460697 269 ntBASIC5.26□□□□□ -1.57
SSU72Q9NP77 AC011476.1-201ENST00000466725 307 ntBASIC5.26□□□□□ -1.57
SSU72Q9NP77 MTATP8P1-201ENST00000467115 207 ntBASIC5.26□□□□□ -1.57
SSU72Q9NP77 SIAH1P1-201ENST00000479411 923 ntBASIC5.26□□□□□ -1.57
SSU72Q9NP77 AC024558.1-201ENST00000505008 528 ntBASIC5.26□□□□□ -1.57
SSU72Q9NP77 SCARNA16.4-201ENST00000516956 187 ntBASIC5.26□□□□□ -1.57
SSU72Q9NP77 RPL23AP53-201ENST00000521854 457 ntBASIC5.26□□□□□ -1.57
SSU72Q9NP77 AP004607.2-201ENST00000533949 322 ntBASIC5.26□□□□□ -1.57
SSU72Q9NP77 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC5.26□□□□□ -1.57
SSU72Q9NP77 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC5.26□□□□□ -1.57
SSU72Q9NP77 AL442067.1-201ENST00000613261 223 ntBASIC5.26□□□□□ -1.57
SSU72Q9NP77 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC5.26□□□□□ -1.57
SSU72Q9NP77 AL118522.2-201ENST00000616045 615 ntBASIC5.26□□□□□ -1.57
SSU72Q9NP77 AL136313.1-201ENST00000624804 202 ntBASIC5.26□□□□□ -1.57
SSU72Q9NP77 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC5.26□□□□□ -1.57
SSU72Q9NP77 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
SSU72Q9NP77 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC5.26□□□□□ -1.57
SSU72Q9NP77 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC5.26□□□□□ -1.57
SSU72Q9NP77 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC5.26□□□□□ -1.57
SSU72Q9NP77 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
SSU72Q9NP77 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
SSU72Q9NP77 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC5.26□□□□□ -1.57
SSU72Q9NP77 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC5.26□□□□□ -1.57
SSU72Q9NP77 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
SSU72Q9NP77 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
SSU72Q9NP77 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC5.25□□□□□ -1.57
SSU72Q9NP77 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
SSU72Q9NP77 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
SSU72Q9NP77 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
SSU72Q9NP77 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
SSU72Q9NP77 MIR375-201ENST00000362103 64 ntBASIC5.25□□□□□ -1.57
SSU72Q9NP77 SNORD115-7-201ENST00000365306 82 ntBASIC5.25□□□□□ -1.57
SSU72Q9NP77 SNORD82-201ENST00000365530 70 ntBASIC5.25□□□□□ -1.57
SSU72Q9NP77 OR2W1-201ENST00000377175 1028 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 98.8 ms