Protein–RNA interactions for Protein: Q9BY43

CHMP4A, Charged multivesicular body protein 4a, humanhuman

Predictions only

Length 222 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4AQ9BY43 PVALB-202ENST00000404171 422 ntTSL 2 BASIC4.96□□□□□ -1.62
CHMP4AQ9BY43 SNX10-203ENST00000409367 746 ntTSL 5 BASIC4.96□□□□□ -1.62
CHMP4AQ9BY43 JKAMPP1-201ENST00000413804 919 ntBASIC4.96□□□□□ -1.62
CHMP4AQ9BY43 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC4.96□□□□□ -1.62
CHMP4AQ9BY43 TEX41-203ENST00000420472 765 ntTSL 3 BASIC4.96□□□□□ -1.62
CHMP4AQ9BY43 AL139247.1-201ENST00000422768 325 ntBASIC4.96□□□□□ -1.62
CHMP4AQ9BY43 MTATP6P4-201ENST00000427725 675 ntBASIC4.96□□□□□ -1.62
CHMP4AQ9BY43 SETD6P1-201ENST00000444575 317 ntBASIC4.96□□□□□ -1.62
CHMP4AQ9BY43 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
CHMP4AQ9BY43 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC4.96□□□□□ -1.62
CHMP4AQ9BY43 RPS4XP10-201ENST00000465034 731 ntBASIC4.96□□□□□ -1.62
CHMP4AQ9BY43 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC4.96□□□□□ -1.62
CHMP4AQ9BY43 OR4G11P-201ENST00000492842 939 ntBASIC4.96□□□□□ -1.62
CHMP4AQ9BY43 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC4.96□□□□□ -1.62
CHMP4AQ9BY43 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC4.96□□□□□ -1.62
CHMP4AQ9BY43 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC4.96□□□□□ -1.62
CHMP4AQ9BY43 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
CHMP4AQ9BY43 AC022861.1-201ENST00000522981 663 ntBASIC4.96□□□□□ -1.62
CHMP4AQ9BY43 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC4.96□□□□□ -1.62
CHMP4AQ9BY43 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC4.96□□□□□ -1.62
CHMP4AQ9BY43 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC4.96□□□□□ -1.62
CHMP4AQ9BY43 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC4.96□□□□□ -1.62
CHMP4AQ9BY43 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC4.96□□□□□ -1.62
CHMP4AQ9BY43 AC018767.1-201ENST00000566236 405 ntTSL 3 BASIC4.96□□□□□ -1.62
CHMP4AQ9BY43 MIR5187-201ENST00000583479 76 ntBASIC4.96□□□□□ -1.62
CHMP4AQ9BY43 AL022067.1-201ENST00000602426 454 ntBASIC4.96□□□□□ -1.62
CHMP4AQ9BY43 AC013444.2-201ENST00000603317 787 ntBASIC4.96□□□□□ -1.62
CHMP4AQ9BY43 AC009237.15-201ENST00000610252 501 ntBASIC4.96□□□□□ -1.62
CHMP4AQ9BY43 AP003122.6-201ENST00000623831 495 ntBASIC4.96□□□□□ -1.62
CHMP4AQ9BY43 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
CHMP4AQ9BY43 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC4.96□□□□□ -1.62
CHMP4AQ9BY43 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC4.96□□□□□ -1.62
CHMP4AQ9BY43 UBE3AP2-201ENST00000429033 2259 ntBASIC4.96□□□□□ -1.62
CHMP4AQ9BY43 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
CHMP4AQ9BY43 AL079343.1-201ENST00000572358 1771 ntBASIC4.96□□□□□ -1.62
CHMP4AQ9BY43 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC4.95□□□□□ -1.62
CHMP4AQ9BY43 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
CHMP4AQ9BY43 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC4.95□□□□□ -1.62
CHMP4AQ9BY43 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC4.95□□□□□ -1.62
CHMP4AQ9BY43 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
CHMP4AQ9BY43 RN7SKP156-201ENST00000410308 342 ntBASIC4.95□□□□□ -1.62
CHMP4AQ9BY43 RNU2-42P-201ENST00000410697 113 ntBASIC4.95□□□□□ -1.62
CHMP4AQ9BY43 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC4.95□□□□□ -1.62
CHMP4AQ9BY43 RPL7P44-201ENST00000424827 742 ntBASIC4.95□□□□□ -1.62
CHMP4AQ9BY43 AL591419.1-201ENST00000427423 339 ntBASIC4.95□□□□□ -1.62
CHMP4AQ9BY43 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC4.95□□□□□ -1.62
CHMP4AQ9BY43 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC4.95□□□□□ -1.62
CHMP4AQ9BY43 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC4.95□□□□□ -1.62
CHMP4AQ9BY43 RPS29P7-201ENST00000439662 171 ntBASIC4.95□□□□□ -1.62
CHMP4AQ9BY43 AL645638.1-201ENST00000440519 361 ntBASIC4.95□□□□□ -1.62
CHMP4AQ9BY43 AL353743.2-203ENST00000443630 492 ntTSL 3 BASIC4.95□□□□□ -1.62
CHMP4AQ9BY43 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC4.95□□□□□ -1.62
CHMP4AQ9BY43 AC006480.1-201ENST00000449887 378 ntBASIC4.95□□□□□ -1.62
CHMP4AQ9BY43 RPL30P14-201ENST00000482744 348 ntBASIC4.95□□□□□ -1.62
CHMP4AQ9BY43 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
CHMP4AQ9BY43 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
CHMP4AQ9BY43 AL359273.1-201ENST00000510918 627 ntBASIC4.95□□□□□ -1.62
CHMP4AQ9BY43 AC112206.4-201ENST00000515142 405 ntBASIC4.95□□□□□ -1.62
CHMP4AQ9BY43 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC4.95□□□□□ -1.62
CHMP4AQ9BY43 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC4.95□□□□□ -1.62
CHMP4AQ9BY43 REXO2-218ENST00000544827 880 ntTSL 3 BASIC4.95□□□□□ -1.62
CHMP4AQ9BY43 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC4.95□□□□□ -1.62
CHMP4AQ9BY43 AC021517.1-203ENST00000590257 421 ntTSL 3 BASIC4.95□□□□□ -1.62
CHMP4AQ9BY43 AC096947.1-201ENST00000603233 470 ntBASIC4.95□□□□□ -1.62
CHMP4AQ9BY43 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC4.95□□□□□ -1.62
CHMP4AQ9BY43 FP236240.3-201ENST00000623061 327 ntBASIC4.95□□□□□ -1.62
CHMP4AQ9BY43 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC4.95□□□□□ -1.62
CHMP4AQ9BY43 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC4.95□□□□□ -1.62
CHMP4AQ9BY43 AC106858.1-201ENST00000637497 429 ntBASIC4.95□□□□□ -1.62
CHMP4AQ9BY43 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC4.94□□□□□ -1.62
CHMP4AQ9BY43 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
CHMP4AQ9BY43 CRP-203ENST00000368111 512 ntTSL 3 BASIC4.94□□□□□ -1.62
CHMP4AQ9BY43 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
CHMP4AQ9BY43 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
CHMP4AQ9BY43 MIR30B-201ENST00000384850 88 ntBASIC4.94□□□□□ -1.62
CHMP4AQ9BY43 MIR554-201ENST00000384874 96 ntBASIC4.94□□□□□ -1.62
CHMP4AQ9BY43 RPL32P23-201ENST00000397237 405 ntBASIC4.94□□□□□ -1.62
CHMP4AQ9BY43 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC4.94□□□□□ -1.62
CHMP4AQ9BY43 RNU2-43P-201ENST00000410306 190 ntBASIC4.94□□□□□ -1.62
CHMP4AQ9BY43 AL513128.1-201ENST00000422675 469 ntTSL 5 BASIC4.94□□□□□ -1.62
CHMP4AQ9BY43 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC4.94□□□□□ -1.62
CHMP4AQ9BY43 RPL21P40-201ENST00000428586 483 ntBASIC4.94□□□□□ -1.62
CHMP4AQ9BY43 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC4.94□□□□□ -1.62
CHMP4AQ9BY43 AC011742.1-201ENST00000431448 434 ntBASIC4.94□□□□□ -1.62
CHMP4AQ9BY43 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC4.94□□□□□ -1.62
CHMP4AQ9BY43 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC4.94□□□□□ -1.62
CHMP4AQ9BY43 AC098824.1-201ENST00000453565 980 ntBASIC4.94□□□□□ -1.62
CHMP4AQ9BY43 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC4.94□□□□□ -1.62
CHMP4AQ9BY43 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
CHMP4AQ9BY43 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC4.94□□□□□ -1.62
CHMP4AQ9BY43 RPL7P24-201ENST00000493052 752 ntBASIC4.94□□□□□ -1.62
CHMP4AQ9BY43 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC4.94□□□□□ -1.62
CHMP4AQ9BY43 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC4.94□□□□□ -1.62
CHMP4AQ9BY43 AC026402.1-201ENST00000513642 170 ntBASIC4.94□□□□□ -1.62
CHMP4AQ9BY43 FAM60DP-201ENST00000524174 632 ntBASIC4.94□□□□□ -1.62
CHMP4AQ9BY43 PDCL2P2-201ENST00000533651 189 ntBASIC4.94□□□□□ -1.62
CHMP4AQ9BY43 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC4.94□□□□□ -1.62
CHMP4AQ9BY43 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
CHMP4AQ9BY43 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC4.94□□□□□ -1.62
CHMP4AQ9BY43 AC015688.2-201ENST00000584523 262 ntBASIC4.94□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 83.5 ms