Protein–RNA interactions for Protein: Q9BXA9

SALL3, Sal-like protein 3, humanhuman

Predictions only

Length 1,300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SALL3Q9BXA9 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
SALL3Q9BXA9 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
SALL3Q9BXA9 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC4.78□□□□□ -1.64
SALL3Q9BXA9 RNU6-213P-201ENST00000384051 104 ntBASIC4.78□□□□□ -1.64
SALL3Q9BXA9 RNU6-1300P-201ENST00000391046 108 ntBASIC4.78□□□□□ -1.64
SALL3Q9BXA9 TMSB4XP8-201ENST00000402089 135 ntBASIC4.78□□□□□ -1.64
SALL3Q9BXA9 TMSB4XP6-201ENST00000415187 135 ntBASIC4.78□□□□□ -1.64
SALL3Q9BXA9 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
SALL3Q9BXA9 GLRXP1-201ENST00000423261 334 ntBASIC4.78□□□□□ -1.64
SALL3Q9BXA9 TMSB4XP1-201ENST00000424567 135 ntBASIC4.78□□□□□ -1.64
SALL3Q9BXA9 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC4.78□□□□□ -1.64
SALL3Q9BXA9 AC004975.1-201ENST00000428733 208 ntBASIC4.78□□□□□ -1.64
SALL3Q9BXA9 AL512649.1-201ENST00000428997 581 ntBASIC4.78□□□□□ -1.64
SALL3Q9BXA9 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC4.78□□□□□ -1.64
SALL3Q9BXA9 AC087650.1-201ENST00000431445 468 ntBASIC4.78□□□□□ -1.64
SALL3Q9BXA9 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC4.78□□□□□ -1.64
SALL3Q9BXA9 BMS1P19-201ENST00000433925 393 ntBASIC4.78□□□□□ -1.64
SALL3Q9BXA9 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC4.78□□□□□ -1.64
SALL3Q9BXA9 RPL12P46-201ENST00000436610 195 ntBASIC4.78□□□□□ -1.64
SALL3Q9BXA9 LARP1BP3-201ENST00000437229 869 ntBASIC4.78□□□□□ -1.64
SALL3Q9BXA9 MTCO3P18-201ENST00000440206 761 ntBASIC4.78□□□□□ -1.64
SALL3Q9BXA9 RPL21P89-201ENST00000444021 467 ntBASIC4.78□□□□□ -1.64
SALL3Q9BXA9 AC114755.5-201ENST00000447760 831 ntBASIC4.78□□□□□ -1.64
SALL3Q9BXA9 EPS15P1-201ENST00000448836 336 ntBASIC4.78□□□□□ -1.64
SALL3Q9BXA9 OR6C5P-201ENST00000452388 923 ntBASIC4.78□□□□□ -1.64
SALL3Q9BXA9 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC4.78□□□□□ -1.64
SALL3Q9BXA9 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC4.78□□□□□ -1.64
SALL3Q9BXA9 AC084198.1-201ENST00000477747 402 ntBASIC4.78□□□□□ -1.64
SALL3Q9BXA9 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC4.78□□□□□ -1.64
SALL3Q9BXA9 AC104687.1-201ENST00000485829 412 ntBASIC4.78□□□□□ -1.64
SALL3Q9BXA9 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC4.78□□□□□ -1.64
SALL3Q9BXA9 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC4.78□□□□□ -1.64
SALL3Q9BXA9 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC4.78□□□□□ -1.64
SALL3Q9BXA9 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC4.78□□□□□ -1.64
SALL3Q9BXA9 AC074344.1-201ENST00000512823 224 ntBASIC4.78□□□□□ -1.64
SALL3Q9BXA9 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC4.78□□□□□ -1.64
SALL3Q9BXA9 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC4.78□□□□□ -1.64
SALL3Q9BXA9 DEFB108A-201ENST00000530110 222 ntBASIC4.78□□□□□ -1.64
SALL3Q9BXA9 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC4.78□□□□□ -1.64
SALL3Q9BXA9 AC008083.2-201ENST00000546707 476 ntBASIC4.78□□□□□ -1.64
SALL3Q9BXA9 AC093227.2-201ENST00000589357 285 ntBASIC4.78□□□□□ -1.64
SALL3Q9BXA9 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC4.78□□□□□ -1.64
SALL3Q9BXA9 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC4.78□□□□□ -1.64
SALL3Q9BXA9 AC092794.2-201ENST00000620933 563 ntBASIC4.78□□□□□ -1.64
SALL3Q9BXA9 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
SALL3Q9BXA9 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
SALL3Q9BXA9 MTCO1P23-201ENST00000415223 1526 ntBASIC4.78□□□□□ -1.64
SALL3Q9BXA9 DCAF13P3-201ENST00000561147 1334 ntBASIC4.78□□□□□ -1.64
SALL3Q9BXA9 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
SALL3Q9BXA9 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC4.78□□□□□ -1.64
SALL3Q9BXA9 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
SALL3Q9BXA9 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
SALL3Q9BXA9 U1.1-201ENST00000384101 164 ntBASIC4.77□□□□□ -1.65
SALL3Q9BXA9 RNU5A-6P-201ENST00000384136 116 ntBASIC4.77□□□□□ -1.65
SALL3Q9BXA9 MIR92A2-201ENST00000385299 75 ntBASIC4.77□□□□□ -1.65
SALL3Q9BXA9 RPS24P12-201ENST00000402084 394 ntBASIC4.77□□□□□ -1.65
SALL3Q9BXA9 OR51A3P-201ENST00000413596 924 ntBASIC4.77□□□□□ -1.65
SALL3Q9BXA9 AC016831.2-201ENST00000417179 352 ntBASIC4.77□□□□□ -1.65
SALL3Q9BXA9 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC4.77□□□□□ -1.65
SALL3Q9BXA9 AL158073.1-201ENST00000426848 1104 ntBASIC4.77□□□□□ -1.65
SALL3Q9BXA9 AL117339.2-201ENST00000430475 180 ntBASIC4.77□□□□□ -1.65
SALL3Q9BXA9 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC4.77□□□□□ -1.65
SALL3Q9BXA9 AC000111.3-201ENST00000433478 193 ntBASIC4.77□□□□□ -1.65
SALL3Q9BXA9 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC4.77□□□□□ -1.65
SALL3Q9BXA9 RPL7P36-201ENST00000444633 681 ntBASIC4.77□□□□□ -1.65
SALL3Q9BXA9 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC4.77□□□□□ -1.65
SALL3Q9BXA9 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC4.77□□□□□ -1.65
SALL3Q9BXA9 MTND2P24-201ENST00000453434 806 ntBASIC4.77□□□□□ -1.65
SALL3Q9BXA9 RPL7P38-201ENST00000488396 739 ntBASIC4.77□□□□□ -1.65
SALL3Q9BXA9 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
SALL3Q9BXA9 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC4.77□□□□□ -1.65
SALL3Q9BXA9 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC4.77□□□□□ -1.65
SALL3Q9BXA9 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC4.77□□□□□ -1.65
SALL3Q9BXA9 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC4.77□□□□□ -1.65
SALL3Q9BXA9 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC4.77□□□□□ -1.65
SALL3Q9BXA9 AL121579.1-201ENST00000555129 305 ntBASIC4.77□□□□□ -1.65
SALL3Q9BXA9 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC4.77□□□□□ -1.65
SALL3Q9BXA9 RN7SL703P-201ENST00000578485 302 ntBASIC4.77□□□□□ -1.65
SALL3Q9BXA9 MIR548Y-201ENST00000582739 110 ntBASIC4.77□□□□□ -1.65
SALL3Q9BXA9 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC4.77□□□□□ -1.65
SALL3Q9BXA9 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
SALL3Q9BXA9 AC010200.2-201ENST00000605098 235 ntBASIC4.77□□□□□ -1.65
SALL3Q9BXA9 AC010857.1-201ENST00000606398 594 ntBASIC4.77□□□□□ -1.65
SALL3Q9BXA9 AC090970.3-201ENST00000612566 866 ntBASIC4.77□□□□□ -1.65
SALL3Q9BXA9 AC005332.6-201ENST00000613178 446 ntBASIC4.77□□□□□ -1.65
SALL3Q9BXA9 MESTIT1_2.1-201ENST00000616328 235 ntBASIC4.77□□□□□ -1.65
SALL3Q9BXA9 AC112484.5-201ENST00000624189 228 ntBASIC4.77□□□□□ -1.65
SALL3Q9BXA9 AC099654.14-201ENST00000638599 341 ntBASIC4.77□□□□□ -1.65
SALL3Q9BXA9 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.77□□□□□ -1.65
SALL3Q9BXA9 AC010329.2-201ENST00000595195 2737 ntBASIC4.77□□□□□ -1.65
SALL3Q9BXA9 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
SALL3Q9BXA9 CR383658.2-201ENST00000547576 1525 ntBASIC4.77□□□□□ -1.65
SALL3Q9BXA9 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC4.77□□□□□ -1.65
SALL3Q9BXA9 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC4.77□□□□□ -1.65
SALL3Q9BXA9 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
SALL3Q9BXA9 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC4.77□□□□□ -1.65
SALL3Q9BXA9 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
SALL3Q9BXA9 AC087190.4-201ENST00000574616 8334 ntBASIC4.77□□□□□ -1.65
SALL3Q9BXA9 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC4.77□□□□□ -1.65
SALL3Q9BXA9 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 97.7 ms