Protein–RNA interactions for Protein: Q9BTN0

LRFN3, Leucine-rich repeat and fibronectin type-III domain-containing protein 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN3Q9BTN0 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
LRFN3Q9BTN0 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC4.71□□□□□ -1.66
LRFN3Q9BTN0 RNU6-356P-201ENST00000384140 107 ntBASIC4.71□□□□□ -1.66
LRFN3Q9BTN0 RNU2-15P-201ENST00000410692 191 ntBASIC4.71□□□□□ -1.66
LRFN3Q9BTN0 B3GALNT1P1-201ENST00000420569 975 ntBASIC4.71□□□□□ -1.66
LRFN3Q9BTN0 AC009238.2-201ENST00000431026 355 ntBASIC4.71□□□□□ -1.66
LRFN3Q9BTN0 USP12PX-201ENST00000432383 1057 ntBASIC4.71□□□□□ -1.66
LRFN3Q9BTN0 AL662791.1-201ENST00000441992 928 ntBASIC4.71□□□□□ -1.66
LRFN3Q9BTN0 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC4.71□□□□□ -1.66
LRFN3Q9BTN0 snoU13.8-201ENST00000458890 104 ntBASIC4.71□□□□□ -1.66
LRFN3Q9BTN0 AP001992.1-205ENST00000462248 379 ntBASIC4.71□□□□□ -1.66
LRFN3Q9BTN0 RPS24P16-201ENST00000497294 392 ntBASIC4.71□□□□□ -1.66
LRFN3Q9BTN0 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC4.71□□□□□ -1.66
LRFN3Q9BTN0 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC4.71□□□□□ -1.66
LRFN3Q9BTN0 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC4.71□□□□□ -1.66
LRFN3Q9BTN0 AC093677.1-201ENST00000514414 678 ntBASIC4.71□□□□□ -1.66
LRFN3Q9BTN0 AC093853.1-201ENST00000515689 483 ntBASIC4.71□□□□□ -1.66
LRFN3Q9BTN0 RN7SKP298-201ENST00000515950 94 ntBASIC4.71□□□□□ -1.66
LRFN3Q9BTN0 CARD16-203ENST00000525374 503 ntTSL 3 BASIC4.71□□□□□ -1.66
LRFN3Q9BTN0 AC104383.1-201ENST00000530297 370 ntBASIC4.71□□□□□ -1.66
LRFN3Q9BTN0 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC4.71□□□□□ -1.66
LRFN3Q9BTN0 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC4.71□□□□□ -1.66
LRFN3Q9BTN0 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC4.71□□□□□ -1.66
LRFN3Q9BTN0 AL022154.1-201ENST00000604698 785 ntBASIC4.71□□□□□ -1.66
LRFN3Q9BTN0 AC027807.2-201ENST00000616099 408 ntBASIC4.71□□□□□ -1.66
LRFN3Q9BTN0 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC4.71□□□□□ -1.66
LRFN3Q9BTN0 AL596245.1-201ENST00000618994 362 ntBASIC4.71□□□□□ -1.66
LRFN3Q9BTN0 MIR8059-201ENST00000620427 81 ntBASIC4.71□□□□□ -1.66
LRFN3Q9BTN0 AC012150.2-201ENST00000621300 544 ntBASIC4.71□□□□□ -1.66
LRFN3Q9BTN0 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC4.71□□□□□ -1.66
LRFN3Q9BTN0 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC4.71□□□□□ -1.66
LRFN3Q9BTN0 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
LRFN3Q9BTN0 AC021242.1-201ENST00000507315 2035 ntBASIC4.71□□□□□ -1.66
LRFN3Q9BTN0 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC4.71□□□□□ -1.66
LRFN3Q9BTN0 AL592182.3-201ENST00000642132 3304 ntBASIC4.71□□□□□ -1.66
LRFN3Q9BTN0 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC4.71□□□□□ -1.66
LRFN3Q9BTN0 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
LRFN3Q9BTN0 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
LRFN3Q9BTN0 AC090229.1-201ENST00000590983 1609 ntBASIC4.71□□□□□ -1.66
LRFN3Q9BTN0 Z73965.1-201ENST00000623412 2297 ntBASIC4.71□□□□□ -1.66
LRFN3Q9BTN0 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
LRFN3Q9BTN0 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC4.71□□□□□ -1.66
LRFN3Q9BTN0 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC4.71□□□□□ -1.66
LRFN3Q9BTN0 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC4.71□□□□□ -1.66
LRFN3Q9BTN0 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC4.71□□□□□ -1.66
LRFN3Q9BTN0 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC4.71□□□□□ -1.66
LRFN3Q9BTN0 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC4.71□□□□□ -1.66
LRFN3Q9BTN0 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
LRFN3Q9BTN0 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
LRFN3Q9BTN0 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC4.7□□□□□ -1.66
LRFN3Q9BTN0 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
LRFN3Q9BTN0 AC108467.2-201ENST00000617640 1597 ntBASIC4.7□□□□□ -1.66
LRFN3Q9BTN0 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC4.7□□□□□ -1.66
LRFN3Q9BTN0 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC4.7□□□□□ -1.66
LRFN3Q9BTN0 LARP1BP1-201ENST00000506036 1359 ntBASIC4.7□□□□□ -1.66
LRFN3Q9BTN0 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
LRFN3Q9BTN0 Y_RNA.61-201ENST00000362835 102 ntBASIC4.7□□□□□ -1.66
LRFN3Q9BTN0 RNU6-769P-201ENST00000384407 104 ntBASIC4.7□□□□□ -1.66
LRFN3Q9BTN0 RNU6-1011P-201ENST00000384668 107 ntBASIC4.7□□□□□ -1.66
LRFN3Q9BTN0 MIR153-1-201ENST00000384914 90 ntBASIC4.7□□□□□ -1.66
LRFN3Q9BTN0 MIR659-201ENST00000384963 97 ntBASIC4.7□□□□□ -1.66
LRFN3Q9BTN0 MIR181A1-201ENST00000385026 110 ntBASIC4.7□□□□□ -1.66
LRFN3Q9BTN0 RNU2-41P-201ENST00000410991 178 ntBASIC4.7□□□□□ -1.66
LRFN3Q9BTN0 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC4.7□□□□□ -1.66
LRFN3Q9BTN0 AC245054.1-201ENST00000420944 258 ntBASIC4.7□□□□□ -1.66
LRFN3Q9BTN0 TRIM60P10Y-201ENST00000425589 751 ntBASIC4.7□□□□□ -1.66
LRFN3Q9BTN0 MTND1P14-201ENST00000427400 950 ntBASIC4.7□□□□□ -1.66
LRFN3Q9BTN0 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC4.7□□□□□ -1.66
LRFN3Q9BTN0 AC000111.3-201ENST00000433478 193 ntBASIC4.7□□□□□ -1.66
LRFN3Q9BTN0 ELOCP18-201ENST00000434209 337 ntBASIC4.7□□□□□ -1.66
LRFN3Q9BTN0 TRIM60P8Y-201ENST00000436338 762 ntBASIC4.7□□□□□ -1.66
LRFN3Q9BTN0 AL450263.2-201ENST00000439400 589 ntBASIC4.7□□□□□ -1.66
LRFN3Q9BTN0 MTND4LP16-201ENST00000440828 295 ntBASIC4.7□□□□□ -1.66
LRFN3Q9BTN0 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC4.7□□□□□ -1.66
LRFN3Q9BTN0 H2AFZP5-201ENST00000446960 382 ntBASIC4.7□□□□□ -1.66
LRFN3Q9BTN0 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC4.7□□□□□ -1.66
LRFN3Q9BTN0 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC4.7□□□□□ -1.66
LRFN3Q9BTN0 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC4.7□□□□□ -1.66
LRFN3Q9BTN0 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC4.7□□□□□ -1.66
LRFN3Q9BTN0 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC4.7□□□□□ -1.66
LRFN3Q9BTN0 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC4.7□□□□□ -1.66
LRFN3Q9BTN0 HIGD1AP3-201ENST00000515857 278 ntBASIC4.7□□□□□ -1.66
LRFN3Q9BTN0 RNU6-314P-201ENST00000516574 104 ntBASIC4.7□□□□□ -1.66
LRFN3Q9BTN0 RN7SKP116-201ENST00000516902 319 ntBASIC4.7□□□□□ -1.66
LRFN3Q9BTN0 AP003385.6-201ENST00000531603 374 ntBASIC4.7□□□□□ -1.66
LRFN3Q9BTN0 AP002453.2-201ENST00000533503 320 ntBASIC4.7□□□□□ -1.66
LRFN3Q9BTN0 FGF7P1-201ENST00000582820 288 ntBASIC4.7□□□□□ -1.66
LRFN3Q9BTN0 C8orf59P2-201ENST00000603441 271 ntBASIC4.7□□□□□ -1.66
LRFN3Q9BTN0 LLPHP1-201ENST00000603571 367 ntBASIC4.7□□□□□ -1.66
LRFN3Q9BTN0 AC025449.1-201ENST00000603896 529 ntBASIC4.7□□□□□ -1.66
LRFN3Q9BTN0 AC010680.4-201ENST00000605334 543 ntBASIC4.7□□□□□ -1.66
LRFN3Q9BTN0 AC092954.2-201ENST00000609103 430 ntBASIC4.7□□□□□ -1.66
LRFN3Q9BTN0 AC006338.1-201ENST00000618453 749 ntBASIC4.7□□□□□ -1.66
LRFN3Q9BTN0 DUXAP9-208ENST00000622815 614 ntBASIC4.7□□□□□ -1.66
LRFN3Q9BTN0 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC4.7□□□□□ -1.66
LRFN3Q9BTN0 AL161912.2-201ENST00000565707 3007 ntBASIC4.7□□□□□ -1.66
LRFN3Q9BTN0 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
LRFN3Q9BTN0 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
LRFN3Q9BTN0 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC4.7□□□□□ -1.66
LRFN3Q9BTN0 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 101.1 ms