Protein–RNA interactions for Protein: Q99742

NPAS1, Neuronal PAS domain-containing protein 1, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS1Q99742 AC092447.10-201ENST00000620607 1652 ntBASIC4.05□□□□□ -1.76
NPAS1Q99742 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
NPAS1Q99742 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
NPAS1Q99742 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
NPAS1Q99742 MFSD4BP1-201ENST00000513330 1552 ntBASIC4.05□□□□□ -1.76
NPAS1Q99742 MAPK10-263ENST00000641052 4307 ntBASIC4.05□□□□□ -1.76
NPAS1Q99742 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC4.05□□□□□ -1.76
NPAS1Q99742 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC4.05□□□□□ -1.76
NPAS1Q99742 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC4.04□□□□□ -1.76
NPAS1Q99742 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC4.04□□□□□ -1.76
NPAS1Q99742 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
NPAS1Q99742 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
NPAS1Q99742 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC4.04□□□□□ -1.76
NPAS1Q99742 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC4.04□□□□□ -1.76
NPAS1Q99742 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC4.04□□□□□ -1.76
NPAS1Q99742 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC4.04□□□□□ -1.76
NPAS1Q99742 RNU6-1279P-201ENST00000383917 103 ntBASIC4.04□□□□□ -1.76
NPAS1Q99742 RNU6-837P-201ENST00000391056 108 ntBASIC4.04□□□□□ -1.76
NPAS1Q99742 AL583835.1-201ENST00000399570 407 ntBASIC4.04□□□□□ -1.76
NPAS1Q99742 FCF1P10-201ENST00000407590 479 ntBASIC4.04□□□□□ -1.76
NPAS1Q99742 HMGB3P23-201ENST00000414981 585 ntBASIC4.04□□□□□ -1.76
NPAS1Q99742 AC245052.5-201ENST00000416320 649 ntBASIC4.04□□□□□ -1.76
NPAS1Q99742 AC127526.1-201ENST00000417526 366 ntBASIC4.04□□□□□ -1.76
NPAS1Q99742 AL807761.1-201ENST00000417622 171 ntBASIC4.04□□□□□ -1.76
NPAS1Q99742 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC4.04□□□□□ -1.76
NPAS1Q99742 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC4.04□□□□□ -1.76
NPAS1Q99742 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC4.04□□□□□ -1.76
NPAS1Q99742 AC112653.1-201ENST00000443851 386 ntBASIC4.04□□□□□ -1.76
NPAS1Q99742 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC4.04□□□□□ -1.76
NPAS1Q99742 snoU13.1-201ENST00000459157 104 ntBASIC4.04□□□□□ -1.76
NPAS1Q99742 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC4.04□□□□□ -1.76
NPAS1Q99742 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC4.04□□□□□ -1.76
NPAS1Q99742 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC4.04□□□□□ -1.76
NPAS1Q99742 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC4.04□□□□□ -1.76
NPAS1Q99742 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC4.04□□□□□ -1.76
NPAS1Q99742 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC4.04□□□□□ -1.76
NPAS1Q99742 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
NPAS1Q99742 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC4.04□□□□□ -1.76
NPAS1Q99742 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC4.04□□□□□ -1.76
NPAS1Q99742 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC4.04□□□□□ -1.76
NPAS1Q99742 AC005951.1-201ENST00000576706 485 ntBASIC4.04□□□□□ -1.76
NPAS1Q99742 TTN-AS1-232ENST00000589487 1077 ntTSL 5 BASIC4.04□□□□□ -1.76
NPAS1Q99742 AC068790.2-201ENST00000602601 557 ntBASIC4.04□□□□□ -1.76
NPAS1Q99742 BPIFA4P-203ENST00000603168 689 ntBASIC4.04□□□□□ -1.76
NPAS1Q99742 AC025946.2-201ENST00000603398 234 ntBASIC4.04□□□□□ -1.76
NPAS1Q99742 AC010201.1-201ENST00000605051 540 ntBASIC4.04□□□□□ -1.76
NPAS1Q99742 AC055876.5-201ENST00000605667 259 ntBASIC4.04□□□□□ -1.76
NPAS1Q99742 OR10AB1P-201ENST00000609613 938 ntBASIC4.04□□□□□ -1.76
NPAS1Q99742 AL136295.6-201ENST00000610486 658 ntBASIC4.04□□□□□ -1.76
NPAS1Q99742 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC4.04□□□□□ -1.76
NPAS1Q99742 AC006065.5-201ENST00000623427 349 ntBASIC4.04□□□□□ -1.76
NPAS1Q99742 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC4.04□□□□□ -1.76
NPAS1Q99742 AC010149.2-201ENST00000637608 315 ntBASIC4.04□□□□□ -1.76
NPAS1Q99742 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
NPAS1Q99742 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
NPAS1Q99742 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC4.04□□□□□ -1.76
NPAS1Q99742 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
NPAS1Q99742 AC027287.1-201ENST00000553115 1453 ntBASIC4.04□□□□□ -1.76
NPAS1Q99742 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC4.03□□□□□ -1.76
NPAS1Q99742 OR56B2P-202ENST00000641377 2453 ntBASIC4.03□□□□□ -1.76
NPAS1Q99742 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
NPAS1Q99742 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC4.03□□□□□ -1.76
NPAS1Q99742 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC4.03□□□□□ -1.76
NPAS1Q99742 MTND5P3-201ENST00000438536 1800 ntBASIC4.03□□□□□ -1.76
NPAS1Q99742 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
NPAS1Q99742 RNA5SP447-201ENST00000363749 119 ntBASIC4.03□□□□□ -1.76
NPAS1Q99742 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC4.03□□□□□ -1.76
NPAS1Q99742 SNORA75-201ENST00000384158 137 ntBASIC4.03□□□□□ -1.76
NPAS1Q99742 SNORD51-201ENST00000384320 80 ntBASIC4.03□□□□□ -1.76
NPAS1Q99742 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
NPAS1Q99742 RNU2-16P-201ENST00000410712 136 ntBASIC4.03□□□□□ -1.76
NPAS1Q99742 RN7SKP216-201ENST00000411050 312 ntBASIC4.03□□□□□ -1.76
NPAS1Q99742 Y_RNA.625-201ENST00000411256 107 ntBASIC4.03□□□□□ -1.76
NPAS1Q99742 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC4.03□□□□□ -1.76
NPAS1Q99742 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC4.03□□□□□ -1.76
NPAS1Q99742 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC4.03□□□□□ -1.76
NPAS1Q99742 SPA17P1-201ENST00000416656 452 ntBASIC4.03□□□□□ -1.76
NPAS1Q99742 AC245028.1-201ENST00000423259 256 ntBASIC4.03□□□□□ -1.76
NPAS1Q99742 AC068287.1-201ENST00000430283 295 ntBASIC4.03□□□□□ -1.76
NPAS1Q99742 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC4.03□□□□□ -1.76
NPAS1Q99742 AC091862.1-201ENST00000438016 1100 ntBASIC4.03□□□□□ -1.76
NPAS1Q99742 AC092641.1-201ENST00000440229 772 ntBASIC4.03□□□□□ -1.76
NPAS1Q99742 AL162591.2-201ENST00000449634 317 ntBASIC4.03□□□□□ -1.76
NPAS1Q99742 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC4.03□□□□□ -1.76
NPAS1Q99742 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC4.03□□□□□ -1.76
NPAS1Q99742 DHFRP3-201ENST00000455595 559 ntBASIC4.03□□□□□ -1.76
NPAS1Q99742 AP1S2P1-201ENST00000457344 379 ntBASIC4.03□□□□□ -1.76
NPAS1Q99742 ACTR3P3-201ENST00000480448 893 ntBASIC4.03□□□□□ -1.76
NPAS1Q99742 AC021382.1-201ENST00000483523 359 ntBASIC4.03□□□□□ -1.76
NPAS1Q99742 AC012170.1-201ENST00000495139 359 ntBASIC4.03□□□□□ -1.76
NPAS1Q99742 AC146944.2-203ENST00000502493 354 ntBASIC4.03□□□□□ -1.76
NPAS1Q99742 AC139713.2-213ENST00000505000 796 ntTSL 2 BASIC4.03□□□□□ -1.76
NPAS1Q99742 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC4.03□□□□□ -1.76
NPAS1Q99742 AC139495.1-202ENST00000513164 354 ntBASIC4.03□□□□□ -1.76
NPAS1Q99742 RN7SKP298-201ENST00000515950 94 ntBASIC4.03□□□□□ -1.76
NPAS1Q99742 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC4.03□□□□□ -1.76
NPAS1Q99742 OR5M7P-201ENST00000526140 972 ntBASIC4.03□□□□□ -1.76
NPAS1Q99742 AP000827.1-201ENST00000527814 258 ntBASIC4.03□□□□□ -1.76
NPAS1Q99742 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
NPAS1Q99742 AL391156.1-201ENST00000554965 554 ntBASIC4.03□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 123.9 ms