Protein–RNA interactions for Protein: Q96NR3

PTCHD1, Patched domain-containing protein 1, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1Q96NR3 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
PTCHD1Q96NR3 HMGB1P21-201ENST00000502313 581 ntBASIC4.96□□□□□ -1.62
PTCHD1Q96NR3 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC4.96□□□□□ -1.62
PTCHD1Q96NR3 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC4.96□□□□□ -1.62
PTCHD1Q96NR3 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC4.96□□□□□ -1.62
PTCHD1Q96NR3 AC012400.1-201ENST00000518452 381 ntBASIC4.96□□□□□ -1.62
PTCHD1Q96NR3 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC4.96□□□□□ -1.62
PTCHD1Q96NR3 AC022360.1-201ENST00000521058 340 ntBASIC4.96□□□□□ -1.62
PTCHD1Q96NR3 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC4.96□□□□□ -1.62
PTCHD1Q96NR3 OR5B10P-201ENST00000532869 642 ntBASIC4.96□□□□□ -1.62
PTCHD1Q96NR3 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.62
PTCHD1Q96NR3 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC4.96□□□□□ -1.62
PTCHD1Q96NR3 AC063949.1-201ENST00000552900 865 ntBASIC4.96□□□□□ -1.62
PTCHD1Q96NR3 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC4.96□□□□□ -1.62
PTCHD1Q96NR3 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC4.96□□□□□ -1.62
PTCHD1Q96NR3 NCAPGP2-201ENST00000557911 754 ntBASIC4.96□□□□□ -1.62
PTCHD1Q96NR3 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC4.96□□□□□ -1.62
PTCHD1Q96NR3 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC4.96□□□□□ -1.62
PTCHD1Q96NR3 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC4.96□□□□□ -1.62
PTCHD1Q96NR3 AC011477.5-201ENST00000586571 259 ntBASIC4.96□□□□□ -1.62
PTCHD1Q96NR3 AL022345.1-201ENST00000607292 135 ntBASIC4.96□□□□□ -1.62
PTCHD1Q96NR3 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC4.96□□□□□ -1.62
PTCHD1Q96NR3 AL590099.1-201ENST00000615276 138 ntBASIC4.96□□□□□ -1.62
PTCHD1Q96NR3 AC099494.2-201ENST00000623371 978 ntBASIC4.96□□□□□ -1.62
PTCHD1Q96NR3 AC134503.1-201ENST00000633048 54 ntBASIC4.96□□□□□ -1.62
PTCHD1Q96NR3 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.62
PTCHD1Q96NR3 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
PTCHD1Q96NR3 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC4.96□□□□□ -1.62
PTCHD1Q96NR3 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
PTCHD1Q96NR3 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC4.96□□□□□ -1.62
PTCHD1Q96NR3 AC092747.4-201ENST00000620519 1861 ntBASIC4.96□□□□□ -1.62
PTCHD1Q96NR3 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC4.96□□□□□ -1.62
PTCHD1Q96NR3 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC4.96□□□□□ -1.62
PTCHD1Q96NR3 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
PTCHD1Q96NR3 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
PTCHD1Q96NR3 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC4.95□□□□□ -1.62
PTCHD1Q96NR3 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
PTCHD1Q96NR3 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
PTCHD1Q96NR3 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
PTCHD1Q96NR3 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC4.95□□□□□ -1.62
PTCHD1Q96NR3 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC4.95□□□□□ -1.62
PTCHD1Q96NR3 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC4.95□□□□□ -1.62
PTCHD1Q96NR3 HSPE1P11-201ENST00000339579 310 ntBASIC4.95□□□□□ -1.62
PTCHD1Q96NR3 U3.2-201ENST00000362981 210 ntBASIC4.95□□□□□ -1.62
PTCHD1Q96NR3 SNORA62.1-201ENST00000364287 154 ntBASIC4.95□□□□□ -1.62
PTCHD1Q96NR3 RN7SKP153-201ENST00000365026 316 ntBASIC4.95□□□□□ -1.62
PTCHD1Q96NR3 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC4.95□□□□□ -1.62
PTCHD1Q96NR3 RNU6-38P-201ENST00000384085 107 ntBASIC4.95□□□□□ -1.62
PTCHD1Q96NR3 MIR600-201ENST00000385007 98 ntBASIC4.95□□□□□ -1.62
PTCHD1Q96NR3 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
PTCHD1Q96NR3 RNU6-278P-201ENST00000390945 109 ntBASIC4.95□□□□□ -1.62
PTCHD1Q96NR3 AL606923.1-201ENST00000406616 190 ntBASIC4.95□□□□□ -1.62
PTCHD1Q96NR3 DUTP5-201ENST00000406790 469 ntBASIC4.95□□□□□ -1.62
PTCHD1Q96NR3 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC4.95□□□□□ -1.62
PTCHD1Q96NR3 HNRNPA3P4-201ENST00000427514 803 ntBASIC4.95□□□□□ -1.62
PTCHD1Q96NR3 EZH2P1-201ENST00000431167 291 ntBASIC4.95□□□□□ -1.62
PTCHD1Q96NR3 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC4.95□□□□□ -1.62
PTCHD1Q96NR3 AL353597.2-202ENST00000434901 373 ntBASIC4.95□□□□□ -1.62
PTCHD1Q96NR3 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC4.95□□□□□ -1.62
PTCHD1Q96NR3 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC4.95□□□□□ -1.62
PTCHD1Q96NR3 AC012512.1-201ENST00000446594 718 ntBASIC4.95□□□□□ -1.62
PTCHD1Q96NR3 AL353691.1-201ENST00000451332 387 ntBASIC4.95□□□□□ -1.62
PTCHD1Q96NR3 Z92846.1-201ENST00000456203 268 ntBASIC4.95□□□□□ -1.62
PTCHD1Q96NR3 SNORD121B-201ENST00000458838 81 ntBASIC4.95□□□□□ -1.62
PTCHD1Q96NR3 RNU7-182P-201ENST00000459009 62 ntBASIC4.95□□□□□ -1.62
PTCHD1Q96NR3 RNU6-333P-201ENST00000459117 107 ntBASIC4.95□□□□□ -1.62
PTCHD1Q96NR3 MTND4P17-201ENST00000470444 350 ntBASIC4.95□□□□□ -1.62
PTCHD1Q96NR3 ALG13-211ENST00000473389 693 ntTSL 2 BASIC4.95□□□□□ -1.62
PTCHD1Q96NR3 RN7SL799P-201ENST00000475891 298 ntBASIC4.95□□□□□ -1.62
PTCHD1Q96NR3 ENSA-211ENST00000503345 793 ntTSL 3 BASIC4.95□□□□□ -1.62
PTCHD1Q96NR3 AC006499.3-201ENST00000506077 748 ntBASIC4.95□□□□□ -1.62
PTCHD1Q96NR3 AC091885.1-201ENST00000506658 268 ntBASIC4.95□□□□□ -1.62
PTCHD1Q96NR3 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC4.95□□□□□ -1.62
PTCHD1Q96NR3 AC110792.2-201ENST00000510278 224 ntBASIC4.95□□□□□ -1.62
PTCHD1Q96NR3 AC016559.2-201ENST00000510759 359 ntBASIC4.95□□□□□ -1.62
PTCHD1Q96NR3 AC016065.2-201ENST00000514530 444 ntBASIC4.95□□□□□ -1.62
PTCHD1Q96NR3 RNU6-1170P-201ENST00000515974 106 ntBASIC4.95□□□□□ -1.62
PTCHD1Q96NR3 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC4.95□□□□□ -1.62
PTCHD1Q96NR3 TRMT10BP1-201ENST00000519377 943 ntBASIC4.95□□□□□ -1.62
PTCHD1Q96NR3 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC4.95□□□□□ -1.62
PTCHD1Q96NR3 RPL7P20-201ENST00000520308 745 ntBASIC4.95□□□□□ -1.62
PTCHD1Q96NR3 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC4.95□□□□□ -1.62
PTCHD1Q96NR3 AP005435.4-201ENST00000529514 284 ntBASIC4.95□□□□□ -1.62
PTCHD1Q96NR3 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC4.95□□□□□ -1.62
PTCHD1Q96NR3 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC4.95□□□□□ -1.62
PTCHD1Q96NR3 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC4.95□□□□□ -1.62
PTCHD1Q96NR3 MIR3171-201ENST00000584270 74 ntBASIC4.95□□□□□ -1.62
PTCHD1Q96NR3 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC4.95□□□□□ -1.62
PTCHD1Q96NR3 AC009597.2-201ENST00000604659 592 ntBASIC4.95□□□□□ -1.62
PTCHD1Q96NR3 AL031666.3-201ENST00000609320 1006 ntBASIC4.95□□□□□ -1.62
PTCHD1Q96NR3 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC4.95□□□□□ -1.62
PTCHD1Q96NR3 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC4.95□□□□□ -1.62
PTCHD1Q96NR3 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC4.95□□□□□ -1.62
PTCHD1Q96NR3 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC4.95□□□□□ -1.62
PTCHD1Q96NR3 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC4.95□□□□□ -1.62
PTCHD1Q96NR3 AL133216.2-202ENST00000634512 349 ntBASIC4.95□□□□□ -1.62
PTCHD1Q96NR3 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC4.95□□□□□ -1.62
PTCHD1Q96NR3 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
PTCHD1Q96NR3 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC4.95□□□□□ -1.62
PTCHD1Q96NR3 AL451142.2-201ENST00000429076 2090 ntBASIC4.95□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 105.7 ms