Protein–RNA interactions for Protein: Q96JI7

SPG11, Spatacsin, humanhuman

Predictions only

Length 2,443 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11Q96JI7 AC010338.1-201ENST00000621823 717 ntBASIC2.1□□□□□ -2.07
SPG11Q96JI7 AL160394.1-201ENST00000624765 724 ntBASIC2.1□□□□□ -2.07
SPG11Q96JI7 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC2.1□□□□□ -2.07
SPG11Q96JI7 ATP8A2P3-201ENST00000426792 1536 ntBASIC2.1□□□□□ -2.07
SPG11Q96JI7 FAM35BP-202ENST00000497389 3337 ntBASIC2.09□□□□□ -2.07
SPG11Q96JI7 AC007064.1-201ENST00000412238 351 ntBASIC2.09□□□□□ -2.07
SPG11Q96JI7 AMD1P2-201ENST00000412936 992 ntBASIC2.09□□□□□ -2.07
SPG11Q96JI7 RPL7P10-201ENST00000417407 739 ntBASIC2.09□□□□□ -2.07
SPG11Q96JI7 RPL21P41-201ENST00000459863 264 ntBASIC2.09□□□□□ -2.07
SPG11Q96JI7 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC2.09□□□□□ -2.07
SPG11Q96JI7 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC2.09□□□□□ -2.07
SPG11Q96JI7 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC2.09□□□□□ -2.07
SPG11Q96JI7 OR4T1P-201ENST00000554933 911 ntBASIC2.09□□□□□ -2.07
SPG11Q96JI7 MIR4635-201ENST00000583759 79 ntBASIC2.09□□□□□ -2.07
SPG11Q96JI7 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC2.09□□□□□ -2.07
SPG11Q96JI7 BMS1P7-201ENST00000602440 1052 ntBASIC2.09□□□□□ -2.07
SPG11Q96JI7 AL451049.1-201ENST00000608672 497 ntBASIC2.09□□□□□ -2.07
SPG11Q96JI7 GLS-203ENST00000409215 632 ntTSL 4 BASIC2.09□□□□□ -2.08
SPG11Q96JI7 RANP7-201ENST00000418085 644 ntBASIC2.09□□□□□ -2.08
SPG11Q96JI7 RN7SL75P-201ENST00000461926 281 ntBASIC2.09□□□□□ -2.08
SPG11Q96JI7 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC2.09□□□□□ -2.08
SPG11Q96JI7 IGLVIV-53-201ENST00000520107 367 ntBASIC2.09□□□□□ -2.08
SPG11Q96JI7 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC2.09□□□□□ -2.08
SPG11Q96JI7 ERP27-202ENST00000540097 993 ntTSL 2 BASIC2.09□□□□□ -2.08
SPG11Q96JI7 AL591516.1-201ENST00000611326 274 ntBASIC2.09□□□□□ -2.08
SPG11Q96JI7 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC2.09□□□□□ -2.08
SPG11Q96JI7 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC2.09□□□□□ -2.08
SPG11Q96JI7 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
SPG11Q96JI7 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC2.08□□□□□ -2.08
SPG11Q96JI7 AC092991.1-201ENST00000477176 376 ntBASIC2.08□□□□□ -2.08
SPG11Q96JI7 AC068587.2-201ENST00000478386 781 ntBASIC2.08□□□□□ -2.08
SPG11Q96JI7 AC118282.1-201ENST00000506408 765 ntBASIC2.08□□□□□ -2.08
SPG11Q96JI7 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC2.08□□□□□ -2.08
SPG11Q96JI7 AC026464.5-201ENST00000562497 722 ntBASIC2.08□□□□□ -2.08
SPG11Q96JI7 MTCYBP28-201ENST00000566728 1132 ntBASIC2.08□□□□□ -2.08
SPG11Q96JI7 AC092628.2-201ENST00000622492 339 ntBASIC2.08□□□□□ -2.08
SPG11Q96JI7 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.08□□□□□ -2.08
SPG11Q96JI7 EI24P2-201ENST00000397776 1076 ntBASIC2.08□□□□□ -2.08
SPG11Q96JI7 VDAC1P3-201ENST00000434069 851 ntBASIC2.08□□□□□ -2.08
SPG11Q96JI7 AC016687.1-201ENST00000482574 353 ntBASIC2.08□□□□□ -2.08
SPG11Q96JI7 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC2.08□□□□□ -2.08
SPG11Q96JI7 AC110741.2-201ENST00000605278 268 ntBASIC2.08□□□□□ -2.08
SPG11Q96JI7 AC009318.2-201ENST00000610917 651 ntBASIC2.08□□□□□ -2.08
SPG11Q96JI7 RMST_2.1-201ENST00000617263 136 ntBASIC2.08□□□□□ -2.08
SPG11Q96JI7 U7.8-201ENST00000619968 63 ntBASIC2.08□□□□□ -2.08
SPG11Q96JI7 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC2.08□□□□□ -2.08
SPG11Q96JI7 Z73965.1-201ENST00000623412 2297 ntBASIC2.07□□□□□ -2.08
SPG11Q96JI7 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC2.07□□□□□ -2.08
SPG11Q96JI7 RNA5SP383-201ENST00000362934 120 ntBASIC2.07□□□□□ -2.08
SPG11Q96JI7 AL359511.1-201ENST00000402970 211 ntBASIC2.07□□□□□ -2.08
SPG11Q96JI7 RPS12P5-201ENST00000423449 371 ntBASIC2.07□□□□□ -2.08
SPG11Q96JI7 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
SPG11Q96JI7 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC2.07□□□□□ -2.08
SPG11Q96JI7 AL589740.1-201ENST00000457513 756 ntTSL 3 BASIC2.07□□□□□ -2.08
SPG11Q96JI7 PANCR-202ENST00000513690 448 ntTSL 2 BASIC2.07□□□□□ -2.08
SPG11Q96JI7 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC2.07□□□□□ -2.08
SPG11Q96JI7 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC2.07□□□□□ -2.08
SPG11Q96JI7 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC2.07□□□□□ -2.08
SPG11Q96JI7 Z99496.1-201ENST00000469424 1477 ntBASIC2.07□□□□□ -2.08
SPG11Q96JI7 GABPAP-201ENST00000419271 1356 ntBASIC2.07□□□□□ -2.08
SPG11Q96JI7 CLECL1-201ENST00000327839 670 ntAPPRIS P3 TSL 1 (best) BASIC2.07□□□□□ -2.08
SPG11Q96JI7 RPL9P7-201ENST00000330965 580 ntBASIC2.07□□□□□ -2.08
SPG11Q96JI7 AL355379.1-201ENST00000405542 640 ntBASIC2.07□□□□□ -2.08
SPG11Q96JI7 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
SPG11Q96JI7 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
SPG11Q96JI7 MED4-AS1-201ENST00000422483 542 ntTSL 2 BASIC2.07□□□□□ -2.08
SPG11Q96JI7 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC2.07□□□□□ -2.08
SPG11Q96JI7 AC104389.3-201ENST00000445629 235 ntBASIC2.07□□□□□ -2.08
SPG11Q96JI7 AP000893.1-201ENST00000474462 794 ntBASIC2.07□□□□□ -2.08
SPG11Q96JI7 AP004217.1-201ENST00000480579 346 ntBASIC2.07□□□□□ -2.08
SPG11Q96JI7 ACTR6P1-201ENST00000514311 1104 ntBASIC2.07□□□□□ -2.08
SPG11Q96JI7 AL365503.1-201ENST00000605247 905 ntBASIC2.07□□□□□ -2.08
SPG11Q96JI7 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC2.07□□□□□ -2.08
SPG11Q96JI7 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
SPG11Q96JI7 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.06□□□□□ -2.08
SPG11Q96JI7 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
SPG11Q96JI7 AC007390.2-201ENST00000606229 3803 ntBASIC2.06□□□□□ -2.08
SPG11Q96JI7 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
SPG11Q96JI7 RNA5SP88-201ENST00000365560 109 ntBASIC2.06□□□□□ -2.08
SPG11Q96JI7 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC2.06□□□□□ -2.08
SPG11Q96JI7 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC2.06□□□□□ -2.08
SPG11Q96JI7 AL354710.1-201ENST00000453641 246 ntBASIC2.06□□□□□ -2.08
SPG11Q96JI7 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC2.06□□□□□ -2.08
SPG11Q96JI7 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC2.06□□□□□ -2.08
SPG11Q96JI7 SNORA31.1-201ENST00000515993 133 ntBASIC2.06□□□□□ -2.08
SPG11Q96JI7 SNORA31.5-201ENST00000516190 133 ntBASIC2.06□□□□□ -2.08
SPG11Q96JI7 RNA5SP220-201ENST00000516298 104 ntBASIC2.06□□□□□ -2.08
SPG11Q96JI7 RNU4ATAC15P-201ENST00000516415 126 ntBASIC2.06□□□□□ -2.08
SPG11Q96JI7 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
SPG11Q96JI7 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC2.06□□□□□ -2.08
SPG11Q96JI7 AL122125.1-201ENST00000616999 600 ntBASIC2.06□□□□□ -2.08
SPG11Q96JI7 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC2.06□□□□□ -2.08
SPG11Q96JI7 CUL1P1-201ENST00000509510 2425 ntBASIC2.06□□□□□ -2.08
SPG11Q96JI7 FBXL13-208ENST00000456695 1605 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
SPG11Q96JI7 AC069528.2-201ENST00000624849 1991 ntBASIC2.06□□□□□ -2.08
SPG11Q96JI7 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.06□□□□□ -2.08
SPG11Q96JI7 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC2.06□□□□□ -2.08
SPG11Q96JI7 RNU6-1-201ENST00000383898 107 ntBASIC2.06□□□□□ -2.08
SPG11Q96JI7 RNU6-42P-201ENST00000384165 107 ntBASIC2.06□□□□□ -2.08
SPG11Q96JI7 RNU6-36P-201ENST00000384172 107 ntBASIC2.06□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 117 ms