Protein–RNA interactions for Protein: Q96BD8

SKA1, Spindle and kinetochore-associated protein 1, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1Q96BD8 AC091153.1-201ENST00000466297 402 ntBASIC4.21□□□□□ -1.74
SKA1Q96BD8 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC4.21□□□□□ -1.74
SKA1Q96BD8 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC4.21□□□□□ -1.74
SKA1Q96BD8 USP9YP5-201ENST00000511770 630 ntBASIC4.21□□□□□ -1.74
SKA1Q96BD8 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC4.21□□□□□ -1.74
SKA1Q96BD8 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC4.21□□□□□ -1.74
SKA1Q96BD8 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC4.21□□□□□ -1.74
SKA1Q96BD8 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC4.21□□□□□ -1.74
SKA1Q96BD8 AC053481.4-201ENST00000583164 216 ntBASIC4.21□□□□□ -1.74
SKA1Q96BD8 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC4.21□□□□□ -1.74
SKA1Q96BD8 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC4.21□□□□□ -1.74
SKA1Q96BD8 AC105148.1-201ENST00000604961 409 ntBASIC4.21□□□□□ -1.74
SKA1Q96BD8 AL592221.1-201ENST00000605266 382 ntBASIC4.21□□□□□ -1.74
SKA1Q96BD8 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC4.21□□□□□ -1.74
SKA1Q96BD8 AC106028.5-201ENST00000610332 395 ntBASIC4.21□□□□□ -1.74
SKA1Q96BD8 AL445264.1-201ENST00000621719 171 ntBASIC4.21□□□□□ -1.74
SKA1Q96BD8 AL356863.1-201ENST00000623378 1080 ntBASIC4.21□□□□□ -1.74
SKA1Q96BD8 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC4.21□□□□□ -1.74
SKA1Q96BD8 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC4.21□□□□□ -1.74
SKA1Q96BD8 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC4.21□□□□□ -1.74
SKA1Q96BD8 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
SKA1Q96BD8 AC093908.1-201ENST00000623125 8092 ntBASIC4.21□□□□□ -1.74
SKA1Q96BD8 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
SKA1Q96BD8 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC4.21□□□□□ -1.74
SKA1Q96BD8 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC4.21□□□□□ -1.74
SKA1Q96BD8 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
SKA1Q96BD8 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
SKA1Q96BD8 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
SKA1Q96BD8 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC4.2□□□□□ -1.74
SKA1Q96BD8 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
SKA1Q96BD8 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
SKA1Q96BD8 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
SKA1Q96BD8 RNU6-952P-201ENST00000391164 108 ntBASIC4.2□□□□□ -1.74
SKA1Q96BD8 AL161631.1-201ENST00000417933 486 ntBASIC4.2□□□□□ -1.74
SKA1Q96BD8 AC006960.1-201ENST00000419980 153 ntBASIC4.2□□□□□ -1.74
SKA1Q96BD8 SNRPEP7-201ENST00000438350 220 ntBASIC4.2□□□□□ -1.74
SKA1Q96BD8 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC4.2□□□□□ -1.74
SKA1Q96BD8 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC4.2□□□□□ -1.74
SKA1Q96BD8 RN7SL604P-201ENST00000492589 296 ntBASIC4.2□□□□□ -1.74
SKA1Q96BD8 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC4.2□□□□□ -1.74
SKA1Q96BD8 AC020699.1-201ENST00000505161 445 ntBASIC4.2□□□□□ -1.74
SKA1Q96BD8 AC010460.1-201ENST00000507087 466 ntBASIC4.2□□□□□ -1.74
SKA1Q96BD8 AC023632.4-201ENST00000517783 191 ntBASIC4.2□□□□□ -1.74
SKA1Q96BD8 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC4.2□□□□□ -1.74
SKA1Q96BD8 AL391156.1-201ENST00000554965 554 ntBASIC4.2□□□□□ -1.74
SKA1Q96BD8 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC4.2□□□□□ -1.74
SKA1Q96BD8 AC007599.1-201ENST00000568688 1174 ntBASIC4.2□□□□□ -1.74
SKA1Q96BD8 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC4.2□□□□□ -1.74
SKA1Q96BD8 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC4.2□□□□□ -1.74
SKA1Q96BD8 AL022099.1-201ENST00000604551 712 ntBASIC4.2□□□□□ -1.74
SKA1Q96BD8 AL158042.1-201ENST00000605338 460 ntBASIC4.2□□□□□ -1.74
SKA1Q96BD8 MIR6867-201ENST00000610636 67 ntBASIC4.2□□□□□ -1.74
SKA1Q96BD8 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC4.2□□□□□ -1.74
SKA1Q96BD8 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC4.2□□□□□ -1.74
SKA1Q96BD8 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC4.2□□□□□ -1.74
SKA1Q96BD8 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
SKA1Q96BD8 PCF11-AS1-201ENST00000602322 1516 ntBASIC4.2□□□□□ -1.74
SKA1Q96BD8 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC4.2□□□□□ -1.74
SKA1Q96BD8 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
SKA1Q96BD8 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC4.19□□□□□ -1.74
SKA1Q96BD8 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
SKA1Q96BD8 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC4.19□□□□□ -1.74
SKA1Q96BD8 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
SKA1Q96BD8 MIR372-201ENST00000362225 67 ntBASIC4.19□□□□□ -1.74
SKA1Q96BD8 RNU1-89P-201ENST00000384592 164 ntBASIC4.19□□□□□ -1.74
SKA1Q96BD8 MIR513B-201ENST00000385136 84 ntBASIC4.19□□□□□ -1.74
SKA1Q96BD8 ATP5F1P4-201ENST00000397288 746 ntBASIC4.19□□□□□ -1.74
SKA1Q96BD8 AC097374.1-203ENST00000400783 485 ntBASIC4.19□□□□□ -1.74
SKA1Q96BD8 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC4.19□□□□□ -1.74
SKA1Q96BD8 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
SKA1Q96BD8 MTCYBP45-201ENST00000435243 565 ntBASIC4.19□□□□□ -1.74
SKA1Q96BD8 MTCO2P20-201ENST00000437339 673 ntBASIC4.19□□□□□ -1.74
SKA1Q96BD8 LINC00972-202ENST00000438065 788 ntTSL 3 BASIC4.19□□□□□ -1.74
SKA1Q96BD8 FGF7P5-201ENST00000441829 291 ntBASIC4.19□□□□□ -1.74
SKA1Q96BD8 RAD23BP3-201ENST00000454157 1152 ntBASIC4.19□□□□□ -1.74
SKA1Q96BD8 BX322784.1-201ENST00000455793 1077 ntBASIC4.19□□□□□ -1.74
SKA1Q96BD8 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC4.19□□□□□ -1.74
SKA1Q96BD8 RPL31P50-201ENST00000471002 296 ntBASIC4.19□□□□□ -1.74
SKA1Q96BD8 NIPA2P2-201ENST00000496376 1083 ntBASIC4.19□□□□□ -1.74
SKA1Q96BD8 AC021146.8-201ENST00000507455 733 ntBASIC4.19□□□□□ -1.74
SKA1Q96BD8 IL7R-208ENST00000511982 612 ntTSL 2 BASIC4.19□□□□□ -1.74
SKA1Q96BD8 AC103783.1-201ENST00000520506 373 ntBASIC4.19□□□□□ -1.74
SKA1Q96BD8 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC4.19□□□□□ -1.74
SKA1Q96BD8 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC4.19□□□□□ -1.74
SKA1Q96BD8 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC4.19□□□□□ -1.74
SKA1Q96BD8 AC011853.2-201ENST00000526901 774 ntTSL 5 BASIC4.19□□□□□ -1.74
SKA1Q96BD8 MTCO2P15-201ENST00000532655 656 ntBASIC4.19□□□□□ -1.74
SKA1Q96BD8 AC006064.5-201ENST00000541782 248 ntBASIC4.19□□□□□ -1.74
SKA1Q96BD8 OR6C7P-201ENST00000547875 934 ntBASIC4.19□□□□□ -1.74
SKA1Q96BD8 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC4.19□□□□□ -1.74
SKA1Q96BD8 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC4.19□□□□□ -1.74
SKA1Q96BD8 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC4.19□□□□□ -1.74
SKA1Q96BD8 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC4.19□□□□□ -1.74
SKA1Q96BD8 RN7SL600P-201ENST00000581811 299 ntBASIC4.19□□□□□ -1.74
SKA1Q96BD8 AC006130.2-201ENST00000586202 326 ntBASIC4.19□□□□□ -1.74
SKA1Q96BD8 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC4.19□□□□□ -1.74
SKA1Q96BD8 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC4.19□□□□□ -1.74
SKA1Q96BD8 MIR6875-201ENST00000617506 72 ntBASIC4.19□□□□□ -1.74
SKA1Q96BD8 AP000484.1-201ENST00000620067 1252 ntBASIC4.19□□□□□ -1.74
SKA1Q96BD8 AF117829.1-206ENST00000621883 3802 ntBASIC4.19□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 94.5 ms