Protein–RNA interactions for Protein: Q8NF91

SYNE1, Nesprin-1, humanhuman

Known RBP Predictions only

Length 8,797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1Q8NF91 AC084757.1-201ENST00000559987 490 ntBASIC0.81□□□□□ -2.28
SYNE1Q8NF91 LINC01355-202ENST00000604481 400 ntTSL 2 BASIC0.81□□□□□ -2.28
SYNE1Q8NF91 AC073476.4-201ENST00000628409 72 ntBASIC0.81□□□□□ -2.28
SYNE1Q8NF91 Y_RNA.540-201ENST00000384638 111 ntBASIC0.81□□□□□ -2.28
SYNE1Q8NF91 ATF1P1-201ENST00000406040 927 ntBASIC0.81□□□□□ -2.28
SYNE1Q8NF91 AC097717.1-233ENST00000413557 460 ntTSL 3 BASIC0.81□□□□□ -2.28
SYNE1Q8NF91 RPL7P53-201ENST00000421245 739 ntBASIC0.81□□□□□ -2.28
SYNE1Q8NF91 MTND4LP13-201ENST00000425022 298 ntBASIC0.81□□□□□ -2.28
SYNE1Q8NF91 FAR1P1-201ENST00000427163 934 ntBASIC0.81□□□□□ -2.28
SYNE1Q8NF91 AC009969.1-201ENST00000438726 172 ntBASIC0.81□□□□□ -2.28
SYNE1Q8NF91 HSPE1P6-201ENST00000479457 291 ntBASIC0.81□□□□□ -2.28
SYNE1Q8NF91 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC0.81□□□□□ -2.28
SYNE1Q8NF91 AC007536.1-201ENST00000533382 349 ntBASIC0.81□□□□□ -2.28
SYNE1Q8NF91 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC0.81□□□□□ -2.28
SYNE1Q8NF91 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC0.81□□□□□ -2.28
SYNE1Q8NF91 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC0.81□□□□□ -2.28
SYNE1Q8NF91 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC0.81□□□□□ -2.28
SYNE1Q8NF91 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC0.81□□□□□ -2.28
SYNE1Q8NF91 AC022031.1-201ENST00000585985 2593 ntBASIC0.81□□□□□ -2.28
SYNE1Q8NF91 KLRF1-201ENST00000279545 1091 ntTSL 1 (best) BASIC0.81□□□□□ -2.28
SYNE1Q8NF91 SNORA26.7-201ENST00000391288 122 ntBASIC0.81□□□□□ -2.28
SYNE1Q8NF91 AC009414.1-201ENST00000427200 443 ntBASIC0.81□□□□□ -2.28
SYNE1Q8NF91 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC0.81□□□□□ -2.28
SYNE1Q8NF91 HMGB3P21-201ENST00000452483 547 ntBASIC0.81□□□□□ -2.28
SYNE1Q8NF91 AP004217.1-201ENST00000480579 346 ntBASIC0.81□□□□□ -2.28
SYNE1Q8NF91 RNU6-1053P-201ENST00000515930 101 ntBASIC0.81□□□□□ -2.28
SYNE1Q8NF91 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC0.81□□□□□ -2.28
SYNE1Q8NF91 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC0.81□□□□□ -2.28
SYNE1Q8NF91 KLRF1-208ENST00000617889 1241 ntAPPRIS P1 TSL 1 (best) BASIC0.81□□□□□ -2.28
SYNE1Q8NF91 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC0.81□□□□□ -2.28
SYNE1Q8NF91 OR5BR1P-201ENST00000524992 1330 ntBASIC0.81□□□□□ -2.28
SYNE1Q8NF91 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC0.81□□□□□ -2.28
SYNE1Q8NF91 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC0.81□□□□□ -2.28
SYNE1Q8NF91 AC108471.1-201ENST00000513977 287 ntBASIC0.81□□□□□ -2.28
SYNE1Q8NF91 AL355432.1-201ENST00000522960 564 ntTSL 3 BASIC0.81□□□□□ -2.28
SYNE1Q8NF91 MIR4648-201ENST00000580107 72 ntBASIC0.81□□□□□ -2.28
SYNE1Q8NF91 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC0.81□□□□□ -2.28
SYNE1Q8NF91 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC0.81□□□□□ -2.28
SYNE1Q8NF91 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC0.81□□□□□ -2.28
SYNE1Q8NF91 ZNF72P-201ENST00000425869 1908 ntBASIC0.81□□□□□ -2.28
SYNE1Q8NF91 AC138915.3-201ENST00000562908 1389 ntBASIC0.81□□□□□ -2.28
SYNE1Q8NF91 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC0.81□□□□□ -2.28
SYNE1Q8NF91 RNA5SP167-201ENST00000365461 116 ntBASIC0.81□□□□□ -2.28
SYNE1Q8NF91 Y_RNA.374-201ENST00000365606 101 ntBASIC0.81□□□□□ -2.28
SYNE1Q8NF91 TRAPPC2P10-201ENST00000415662 323 ntBASIC0.81□□□□□ -2.28
SYNE1Q8NF91 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC0.81□□□□□ -2.28
SYNE1Q8NF91 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC0.81□□□□□ -2.28
SYNE1Q8NF91 AC013410.1-201ENST00000436223 1232 ntBASIC0.81□□□□□ -2.28
SYNE1Q8NF91 YWHAZP7-201ENST00000436906 631 ntBASIC0.81□□□□□ -2.28
SYNE1Q8NF91 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC0.81□□□□□ -2.28
SYNE1Q8NF91 CYCSP20-201ENST00000473154 315 ntBASIC0.81□□□□□ -2.28
SYNE1Q8NF91 AP000926.3-201ENST00000497201 299 ntBASIC0.81□□□□□ -2.28
SYNE1Q8NF91 AC111000.2-201ENST00000507775 550 ntBASIC0.81□□□□□ -2.28
SYNE1Q8NF91 AC234781.5-201ENST00000508429 271 ntBASIC0.81□□□□□ -2.28
SYNE1Q8NF91 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC0.81□□□□□ -2.28
SYNE1Q8NF91 AP001207.1-201ENST00000524051 481 ntBASIC0.81□□□□□ -2.28
SYNE1Q8NF91 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC0.81□□□□□ -2.28
SYNE1Q8NF91 MIR4506-201ENST00000584693 77 ntBASIC0.81□□□□□ -2.28
SYNE1Q8NF91 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC0.81□□□□□ -2.28
SYNE1Q8NF91 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC0.81□□□□□ -2.28
SYNE1Q8NF91 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC0.81□□□□□ -2.28
SYNE1Q8NF91 RPL7P25-201ENST00000404151 721 ntBASIC0.81□□□□□ -2.28
SYNE1Q8NF91 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC0.81□□□□□ -2.28
SYNE1Q8NF91 RNU4-53P-201ENST00000410828 140 ntBASIC0.81□□□□□ -2.28
SYNE1Q8NF91 RNU6-55P-201ENST00000411092 107 ntBASIC0.81□□□□□ -2.28
SYNE1Q8NF91 RNU6-954P-201ENST00000411355 107 ntBASIC0.81□□□□□ -2.28
SYNE1Q8NF91 ARF4P2-201ENST00000430209 526 ntBASIC0.81□□□□□ -2.28
SYNE1Q8NF91 AC100801.1-201ENST00000517368 517 ntTSL 3 BASIC0.81□□□□□ -2.28
SYNE1Q8NF91 PPFIA2-AS1-202ENST00000549161 1080 ntTSL 3 BASIC0.81□□□□□ -2.28
SYNE1Q8NF91 AC044913.1-201ENST00000557200 430 ntBASIC0.81□□□□□ -2.28
SYNE1Q8NF91 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC0.81□□□□□ -2.28
SYNE1Q8NF91 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC0.81□□□□□ -2.28
SYNE1Q8NF91 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC0.81□□□□□ -2.28
SYNE1Q8NF91 MIR1273D-201ENST00000577266 86 ntBASIC0.81□□□□□ -2.28
SYNE1Q8NF91 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC0.81□□□□□ -2.28
SYNE1Q8NF91 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC0.81□□□□□ -2.28
SYNE1Q8NF91 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC0.81□□□□□ -2.28
SYNE1Q8NF91 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC0.81□□□□□ -2.28
SYNE1Q8NF91 MIR181B1-201ENST00000385240 110 ntBASIC0.8□□□□□ -2.28
SYNE1Q8NF91 RN7SKP123-201ENST00000410732 291 ntBASIC0.8□□□□□ -2.28
SYNE1Q8NF91 ACTR3BP6-201ENST00000422332 1241 ntBASIC0.8□□□□□ -2.28
SYNE1Q8NF91 USP9YP7-201ENST00000436723 430 ntBASIC0.8□□□□□ -2.28
SYNE1Q8NF91 AC018634.1-201ENST00000437554 401 ntBASIC0.8□□□□□ -2.28
SYNE1Q8NF91 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC0.8□□□□□ -2.28
SYNE1Q8NF91 USP9YP32-201ENST00000452432 430 ntBASIC0.8□□□□□ -2.28
SYNE1Q8NF91 AC021205.1-201ENST00000468797 348 ntBASIC0.8□□□□□ -2.28
SYNE1Q8NF91 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC0.8□□□□□ -2.28
SYNE1Q8NF91 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC0.8□□□□□ -2.28
SYNE1Q8NF91 AC116447.1-201ENST00000613153 453 ntBASIC0.8□□□□□ -2.28
SYNE1Q8NF91 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC0.8□□□□□ -2.28
SYNE1Q8NF91 DYNLT3P1-201ENST00000378574 347 ntBASIC0.8□□□□□ -2.28
SYNE1Q8NF91 RNU6-225P-201ENST00000384613 103 ntBASIC0.8□□□□□ -2.28
SYNE1Q8NF91 MTND4P13-201ENST00000402078 1023 ntBASIC0.8□□□□□ -2.28
SYNE1Q8NF91 RPL36AP51-201ENST00000487216 318 ntBASIC0.8□□□□□ -2.28
SYNE1Q8NF91 RPL23AP49-201ENST00000492925 468 ntBASIC0.8□□□□□ -2.28
SYNE1Q8NF91 POU5F1P7-201ENST00000508759 541 ntBASIC0.8□□□□□ -2.28
SYNE1Q8NF91 MIR4498-201ENST00000577599 66 ntBASIC0.8□□□□□ -2.28
SYNE1Q8NF91 AC083899.3-201ENST00000603413 594 ntBASIC0.8□□□□□ -2.28
SYNE1Q8NF91 AC007423.1-201ENST00000605009 627 ntBASIC0.8□□□□□ -2.28
SYNE1Q8NF91 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC0.8□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 103.4 ms