Protein–RNA interactions for Protein: Q8N8U3

RTL3, Retrotransposon Gag-like protein 3, humanhuman

Known RBP Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL3Q8N8U3 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
RTL3Q8N8U3 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
RTL3Q8N8U3 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
RTL3Q8N8U3 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.67□□□□□ -1.82
RTL3Q8N8U3 MTND4P10-201ENST00000446199 1363 ntBASIC3.66□□□□□ -1.82
RTL3Q8N8U3 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC3.66□□□□□ -1.82
RTL3Q8N8U3 ZNF29P-201ENST00000225587 168 ntBASIC3.66□□□□□ -1.82
RTL3Q8N8U3 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
RTL3Q8N8U3 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
RTL3Q8N8U3 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC3.66□□□□□ -1.82
RTL3Q8N8U3 SNORA62.3-201ENST00000365110 153 ntBASIC3.66□□□□□ -1.82
RTL3Q8N8U3 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
RTL3Q8N8U3 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
RTL3Q8N8U3 ANAPC10P1-201ENST00000395991 556 ntBASIC3.66□□□□□ -1.82
RTL3Q8N8U3 AC016769.3-201ENST00000396562 315 ntBASIC3.66□□□□□ -1.82
RTL3Q8N8U3 PTMAP2-201ENST00000397627 327 ntBASIC3.66□□□□□ -1.82
RTL3Q8N8U3 AL079342.2-201ENST00000403367 482 ntBASIC3.66□□□□□ -1.82
RTL3Q8N8U3 RPL23AP47-201ENST00000408017 460 ntBASIC3.66□□□□□ -1.82
RTL3Q8N8U3 OSTCP5-201ENST00000425293 453 ntBASIC3.66□□□□□ -1.82
RTL3Q8N8U3 MTND2P5-201ENST00000432656 1006 ntBASIC3.66□□□□□ -1.82
RTL3Q8N8U3 SEPT7P5-201ENST00000434048 306 ntBASIC3.66□□□□□ -1.82
RTL3Q8N8U3 OR10R1P-201ENST00000441524 1141 ntBASIC3.66□□□□□ -1.82
RTL3Q8N8U3 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC3.66□□□□□ -1.82
RTL3Q8N8U3 MTCO3P16-201ENST00000454456 754 ntBASIC3.66□□□□□ -1.82
RTL3Q8N8U3 NECAP1P2-201ENST00000455668 727 ntBASIC3.66□□□□□ -1.82
RTL3Q8N8U3 AC106707.2-201ENST00000484182 374 ntBASIC3.66□□□□□ -1.82
RTL3Q8N8U3 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
RTL3Q8N8U3 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC3.66□□□□□ -1.82
RTL3Q8N8U3 AC113420.1-201ENST00000507903 571 ntBASIC3.66□□□□□ -1.82
RTL3Q8N8U3 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC3.66□□□□□ -1.82
RTL3Q8N8U3 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC3.66□□□□□ -1.82
RTL3Q8N8U3 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC3.66□□□□□ -1.82
RTL3Q8N8U3 OR5AP1P-201ENST00000529730 940 ntBASIC3.66□□□□□ -1.82
RTL3Q8N8U3 AL139174.1-201ENST00000531489 886 ntBASIC3.66□□□□□ -1.82
RTL3Q8N8U3 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC3.66□□□□□ -1.82
RTL3Q8N8U3 MEG8-215ENST00000555354 469 ntTSL 3 BASIC3.66□□□□□ -1.82
RTL3Q8N8U3 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC3.66□□□□□ -1.82
RTL3Q8N8U3 AC087481.2-201ENST00000565492 330 ntBASIC3.66□□□□□ -1.82
RTL3Q8N8U3 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC3.66□□□□□ -1.82
RTL3Q8N8U3 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC3.66□□□□□ -1.82
RTL3Q8N8U3 AC006116.10-201ENST00000591836 581 ntBASIC3.66□□□□□ -1.82
RTL3Q8N8U3 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.66□□□□□ -1.82
RTL3Q8N8U3 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC3.66□□□□□ -1.82
RTL3Q8N8U3 AC112220.2-201ENST00000605513 533 ntBASIC3.66□□□□□ -1.82
RTL3Q8N8U3 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC3.66□□□□□ -1.82
RTL3Q8N8U3 RNU4-5P-201ENST00000607255 135 ntBASIC3.66□□□□□ -1.82
RTL3Q8N8U3 AL157392.4-201ENST00000609756 345 ntBASIC3.66□□□□□ -1.82
RTL3Q8N8U3 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC3.66□□□□□ -1.82
RTL3Q8N8U3 AC109809.1-201ENST00000619665 545 ntBASIC3.66□□□□□ -1.82
RTL3Q8N8U3 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC3.66□□□□□ -1.82
RTL3Q8N8U3 AL590240.3-201ENST00000621416 943 ntBASIC3.66□□□□□ -1.82
RTL3Q8N8U3 AP000770.2-201ENST00000623694 100 ntBASIC3.66□□□□□ -1.82
RTL3Q8N8U3 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC3.66□□□□□ -1.82
RTL3Q8N8U3 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC3.66□□□□□ -1.82
RTL3Q8N8U3 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.66□□□□□ -1.82
RTL3Q8N8U3 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
RTL3Q8N8U3 AC073073.2-201ENST00000609827 2578 ntBASIC3.66□□□□□ -1.82
RTL3Q8N8U3 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
RTL3Q8N8U3 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC3.66□□□□□ -1.82
RTL3Q8N8U3 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
RTL3Q8N8U3 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.66□□□□□ -1.82
RTL3Q8N8U3 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC3.65□□□□□ -1.82
RTL3Q8N8U3 MTND4P34-201ENST00000572715 1371 ntBASIC3.65□□□□□ -1.82
RTL3Q8N8U3 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.82
RTL3Q8N8U3 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
RTL3Q8N8U3 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
RTL3Q8N8U3 ST7-221ENST00000465133 2155 ntTSL 5 BASIC3.65□□□□□ -1.82
RTL3Q8N8U3 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
RTL3Q8N8U3 MIR423-201ENST00000362201 94 ntBASIC3.65□□□□□ -1.83
RTL3Q8N8U3 RNU6-707P-201ENST00000364647 95 ntBASIC3.65□□□□□ -1.83
RTL3Q8N8U3 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
RTL3Q8N8U3 RNU6-657P-201ENST00000383904 107 ntBASIC3.65□□□□□ -1.83
RTL3Q8N8U3 PTMAP5-201ENST00000393073 333 ntBASIC3.65□□□□□ -1.83
RTL3Q8N8U3 RN7SKP53-201ENST00000411337 315 ntBASIC3.65□□□□□ -1.83
RTL3Q8N8U3 AC007390.1-201ENST00000415722 356 ntBASIC3.65□□□□□ -1.83
RTL3Q8N8U3 DBIP2-201ENST00000419076 262 ntBASIC3.65□□□□□ -1.83
RTL3Q8N8U3 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC3.65□□□□□ -1.83
RTL3Q8N8U3 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
RTL3Q8N8U3 NANOGP5-201ENST00000424456 877 ntBASIC3.65□□□□□ -1.83
RTL3Q8N8U3 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC3.65□□□□□ -1.83
RTL3Q8N8U3 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC3.65□□□□□ -1.83
RTL3Q8N8U3 Z95327.1-201ENST00000446082 482 ntBASIC3.65□□□□□ -1.83
RTL3Q8N8U3 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC3.65□□□□□ -1.83
RTL3Q8N8U3 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC3.65□□□□□ -1.83
RTL3Q8N8U3 SNORD11.1-201ENST00000459482 85 ntBASIC3.65□□□□□ -1.83
RTL3Q8N8U3 AC023598.1-201ENST00000472521 361 ntBASIC3.65□□□□□ -1.83
RTL3Q8N8U3 AC084357.1-201ENST00000473404 255 ntBASIC3.65□□□□□ -1.83
RTL3Q8N8U3 NIPA2P2-201ENST00000496376 1083 ntBASIC3.65□□□□□ -1.83
RTL3Q8N8U3 AC020699.1-201ENST00000505161 445 ntBASIC3.65□□□□□ -1.83
RTL3Q8N8U3 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC3.65□□□□□ -1.83
RTL3Q8N8U3 RN7SKP265-201ENST00000516448 223 ntBASIC3.65□□□□□ -1.83
RTL3Q8N8U3 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.65□□□□□ -1.83
RTL3Q8N8U3 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
RTL3Q8N8U3 DEFB130C-202ENST00000530001 230 ntBASIC3.65□□□□□ -1.83
RTL3Q8N8U3 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC3.65□□□□□ -1.83
RTL3Q8N8U3 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC3.65□□□□□ -1.83
RTL3Q8N8U3 EEF1B2P4-201ENST00000551398 348 ntBASIC3.65□□□□□ -1.83
RTL3Q8N8U3 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC3.65□□□□□ -1.83
RTL3Q8N8U3 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC3.65□□□□□ -1.83
RTL3Q8N8U3 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC3.65□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 117.7 ms