Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
HERC6Q8IVU3 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
HERC6Q8IVU3 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4.38□□□□□ -1.71
HERC6Q8IVU3 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
HERC6Q8IVU3 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC4.38□□□□□ -1.71
HERC6Q8IVU3 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
HERC6Q8IVU3 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC4.38□□□□□ -1.71
HERC6Q8IVU3 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC4.38□□□□□ -1.71
HERC6Q8IVU3 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC4.37□□□□□ -1.71
HERC6Q8IVU3 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
HERC6Q8IVU3 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
HERC6Q8IVU3 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
HERC6Q8IVU3 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC4.37□□□□□ -1.71
HERC6Q8IVU3 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC4.37□□□□□ -1.71
HERC6Q8IVU3 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
HERC6Q8IVU3 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
HERC6Q8IVU3 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
HERC6Q8IVU3 OR5H2-201ENST00000355273 945 ntBASIC4.37□□□□□ -1.71
HERC6Q8IVU3 Y_RNA.169-201ENST00000363745 96 ntBASIC4.37□□□□□ -1.71
HERC6Q8IVU3 RNU6-821P-201ENST00000390995 107 ntBASIC4.37□□□□□ -1.71
HERC6Q8IVU3 RPL21P17-201ENST00000397467 475 ntBASIC4.37□□□□□ -1.71
HERC6Q8IVU3 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC4.37□□□□□ -1.71
HERC6Q8IVU3 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC4.37□□□□□ -1.71
HERC6Q8IVU3 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC4.37□□□□□ -1.71
HERC6Q8IVU3 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC4.37□□□□□ -1.71
HERC6Q8IVU3 PSMA6P3-201ENST00000428242 164 ntBASIC4.37□□□□□ -1.71
HERC6Q8IVU3 LAMTOR3P1-201ENST00000428620 370 ntBASIC4.37□□□□□ -1.71
HERC6Q8IVU3 HMGN2P31-201ENST00000432430 273 ntBASIC4.37□□□□□ -1.71
HERC6Q8IVU3 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC4.37□□□□□ -1.71
HERC6Q8IVU3 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
HERC6Q8IVU3 CYCSP43-201ENST00000438233 310 ntBASIC4.37□□□□□ -1.71
HERC6Q8IVU3 SETD6P1-201ENST00000444575 317 ntBASIC4.37□□□□□ -1.71
HERC6Q8IVU3 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC4.37□□□□□ -1.71
HERC6Q8IVU3 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC4.37□□□□□ -1.71
HERC6Q8IVU3 AL451050.1-201ENST00000450126 415 ntBASIC4.37□□□□□ -1.71
HERC6Q8IVU3 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC4.37□□□□□ -1.71
HERC6Q8IVU3 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC4.37□□□□□ -1.71
HERC6Q8IVU3 RNU7-136P-201ENST00000458819 69 ntBASIC4.37□□□□□ -1.71
HERC6Q8IVU3 AC072039.1-201ENST00000477611 581 ntBASIC4.37□□□□□ -1.71
HERC6Q8IVU3 RPS6P4-201ENST00000494693 758 ntBASIC4.37□□□□□ -1.71
HERC6Q8IVU3 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC4.37□□□□□ -1.71
HERC6Q8IVU3 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC4.37□□□□□ -1.71
HERC6Q8IVU3 MTCO1P47-201ENST00000523889 1271 ntBASIC4.37□□□□□ -1.71
HERC6Q8IVU3 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC4.37□□□□□ -1.71
HERC6Q8IVU3 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC4.37□□□□□ -1.71
HERC6Q8IVU3 AC007954.1-201ENST00000554198 494 ntBASIC4.37□□□□□ -1.71
HERC6Q8IVU3 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC4.37□□□□□ -1.71
HERC6Q8IVU3 AC008088.1-201ENST00000580993 280 ntBASIC4.37□□□□□ -1.71
HERC6Q8IVU3 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC4.37□□□□□ -1.71
HERC6Q8IVU3 EIF4A2P1-201ENST00000587313 1063 ntBASIC4.37□□□□□ -1.71
HERC6Q8IVU3 AC020914.6-201ENST00000594327 272 ntBASIC4.37□□□□□ -1.71
HERC6Q8IVU3 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC4.37□□□□□ -1.71
HERC6Q8IVU3 AL391497.1-201ENST00000608671 547 ntBASIC4.37□□□□□ -1.71
HERC6Q8IVU3 AC006329.2-201ENST00000611491 394 ntBASIC4.37□□□□□ -1.71
HERC6Q8IVU3 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC4.37□□□□□ -1.71
HERC6Q8IVU3 AL357080.1-201ENST00000617394 239 ntBASIC4.37□□□□□ -1.71
HERC6Q8IVU3 AC068057.2-201ENST00000624047 895 ntBASIC4.37□□□□□ -1.71
HERC6Q8IVU3 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC4.37□□□□□ -1.71
HERC6Q8IVU3 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC4.37□□□□□ -1.71
HERC6Q8IVU3 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
HERC6Q8IVU3 AC087190.4-201ENST00000574616 8334 ntBASIC4.37□□□□□ -1.71
HERC6Q8IVU3 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.37□□□□□ -1.71
HERC6Q8IVU3 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC4.37□□□□□ -1.71
HERC6Q8IVU3 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
HERC6Q8IVU3 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC4.36□□□□□ -1.71
HERC6Q8IVU3 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
HERC6Q8IVU3 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
HERC6Q8IVU3 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC4.36□□□□□ -1.71
HERC6Q8IVU3 RPL21P132-201ENST00000331267 462 ntBASIC4.36□□□□□ -1.71
HERC6Q8IVU3 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC4.36□□□□□ -1.71
HERC6Q8IVU3 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
HERC6Q8IVU3 RNA5SP88-201ENST00000365560 109 ntBASIC4.36□□□□□ -1.71
HERC6Q8IVU3 MIR93-201ENST00000385024 80 ntBASIC4.36□□□□□ -1.71
HERC6Q8IVU3 MIR708-201ENST00000390708 88 ntBASIC4.36□□□□□ -1.71
HERC6Q8IVU3 CYCSP45-201ENST00000402289 315 ntBASIC4.36□□□□□ -1.71
HERC6Q8IVU3 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC4.36□□□□□ -1.71
HERC6Q8IVU3 TPMTP2-201ENST00000414372 726 ntBASIC4.36□□□□□ -1.71
HERC6Q8IVU3 SYF2P2-201ENST00000417620 583 ntBASIC4.36□□□□□ -1.71
HERC6Q8IVU3 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC4.36□□□□□ -1.71
HERC6Q8IVU3 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC4.36□□□□□ -1.71
HERC6Q8IVU3 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC4.36□□□□□ -1.71
HERC6Q8IVU3 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC4.36□□□□□ -1.71
HERC6Q8IVU3 PRDX3P3-201ENST00000447765 522 ntBASIC4.36□□□□□ -1.71
HERC6Q8IVU3 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC4.36□□□□□ -1.71
HERC6Q8IVU3 BZW1P2-201ENST00000473537 826 ntBASIC4.36□□□□□ -1.71
HERC6Q8IVU3 SYPL1P1-201ENST00000473622 768 ntBASIC4.36□□□□□ -1.71
HERC6Q8IVU3 RPL29P14-201ENST00000495837 428 ntBASIC4.36□□□□□ -1.71
HERC6Q8IVU3 MTCYBP43-201ENST00000513621 740 ntBASIC4.36□□□□□ -1.71
HERC6Q8IVU3 MTND5P4-201ENST00000514978 288 ntBASIC4.36□□□□□ -1.71
HERC6Q8IVU3 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC4.36□□□□□ -1.71
HERC6Q8IVU3 RNU6-232P-201ENST00000517144 64 ntBASIC4.36□□□□□ -1.71
HERC6Q8IVU3 IGKV2D-19-201ENST00000523346 262 ntBASIC4.36□□□□□ -1.71
HERC6Q8IVU3 VBP1-203ENST00000535916 944 ntTSL 2 BASIC4.36□□□□□ -1.71
HERC6Q8IVU3 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC4.36□□□□□ -1.71
HERC6Q8IVU3 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC4.36□□□□□ -1.71
HERC6Q8IVU3 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC4.36□□□□□ -1.71
HERC6Q8IVU3 AC087499.8-201ENST00000578406 226 ntBASIC4.36□□□□□ -1.71
HERC6Q8IVU3 AC090616.5-202ENST00000582111 297 ntBASIC4.36□□□□□ -1.71
HERC6Q8IVU3 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC4.36□□□□□ -1.71
HERC6Q8IVU3 AC008638.3-201ENST00000603341 463 ntBASIC4.36□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 100.1 ms