Protein–RNA interactions for Protein: Q8IV32

CCDC71, Coiled-coil domain-containing protein 71, humanhuman

Predicted RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71Q8IV32 MIR3922-201ENST00000585192 84 ntBASIC3.4□□□□□ -1.87
CCDC71Q8IV32 U3.45-201ENST00000607547 219 ntBASIC3.4□□□□□ -1.87
CCDC71Q8IV32 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC3.4□□□□□ -1.87
CCDC71Q8IV32 STARD13-AS-235ENST00000609335 855 ntTSL 5 BASIC3.4□□□□□ -1.87
CCDC71Q8IV32 AC005332.6-201ENST00000613178 446 ntBASIC3.4□□□□□ -1.87
CCDC71Q8IV32 AC068722.2-201ENST00000618734 544 ntBASIC3.4□□□□□ -1.87
CCDC71Q8IV32 AC092628.2-201ENST00000622492 339 ntBASIC3.4□□□□□ -1.87
CCDC71Q8IV32 AC073348.1-201ENST00000623002 331 ntBASIC3.4□□□□□ -1.87
CCDC71Q8IV32 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC3.4□□□□□ -1.87
CCDC71Q8IV32 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.4□□□□□ -1.87
CCDC71Q8IV32 MIR4496-201ENST00000635896 61 ntBASIC3.4□□□□□ -1.87
CCDC71Q8IV32 MKKS-204ENST00000639674 192 ntBASIC3.4□□□□□ -1.87
CCDC71Q8IV32 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC3.4□□□□□ -1.87
CCDC71Q8IV32 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC3.4□□□□□ -1.87
CCDC71Q8IV32 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
CCDC71Q8IV32 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC3.4□□□□□ -1.87
CCDC71Q8IV32 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC3.4□□□□□ -1.87
CCDC71Q8IV32 ZNF542P-204ENST00000482727 1305 ntBASIC3.4□□□□□ -1.87
CCDC71Q8IV32 AL133383.2-201ENST00000622958 2336 ntBASIC3.39□□□□□ -1.87
CCDC71Q8IV32 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
CCDC71Q8IV32 RNA5SP167-201ENST00000365461 116 ntBASIC3.39□□□□□ -1.87
CCDC71Q8IV32 SNORD116.1-201ENST00000365628 92 ntBASIC3.39□□□□□ -1.87
CCDC71Q8IV32 RNU6-1226P-201ENST00000384317 107 ntBASIC3.39□□□□□ -1.87
CCDC71Q8IV32 MIR34B-201ENST00000385076 84 ntBASIC3.39□□□□□ -1.87
CCDC71Q8IV32 RN7SKP285-201ENST00000410137 318 ntBASIC3.39□□□□□ -1.87
CCDC71Q8IV32 AC073264.1-201ENST00000411508 416 ntBASIC3.39□□□□□ -1.87
CCDC71Q8IV32 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC3.39□□□□□ -1.87
CCDC71Q8IV32 KRR1P1-201ENST00000419430 803 ntBASIC3.39□□□□□ -1.87
CCDC71Q8IV32 MTCO3P1-205ENST00000422088 832 ntBASIC3.39□□□□□ -1.87
CCDC71Q8IV32 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
CCDC71Q8IV32 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC3.39□□□□□ -1.87
CCDC71Q8IV32 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC3.39□□□□□ -1.87
CCDC71Q8IV32 MTCO2P25-201ENST00000447065 681 ntBASIC3.39□□□□□ -1.87
CCDC71Q8IV32 Z73417.1-201ENST00000447373 778 ntBASIC3.39□□□□□ -1.87
CCDC71Q8IV32 PRDX3P3-201ENST00000447765 522 ntBASIC3.39□□□□□ -1.87
CCDC71Q8IV32 AC004022.1-201ENST00000447766 1066 ntBASIC3.39□□□□□ -1.87
CCDC71Q8IV32 AC104978.1-201ENST00000449387 391 ntBASIC3.39□□□□□ -1.87
CCDC71Q8IV32 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC3.39□□□□□ -1.87
CCDC71Q8IV32 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC3.39□□□□□ -1.87
CCDC71Q8IV32 PLGLA-201ENST00000465668 449 ntBASIC3.39□□□□□ -1.87
CCDC71Q8IV32 ACTG1P13-201ENST00000486987 1043 ntBASIC3.39□□□□□ -1.87
CCDC71Q8IV32 RNF138P1-201ENST00000502765 546 ntBASIC3.39□□□□□ -1.87
CCDC71Q8IV32 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC3.39□□□□□ -1.87
CCDC71Q8IV32 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC3.39□□□□□ -1.87
CCDC71Q8IV32 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC3.39□□□□□ -1.87
CCDC71Q8IV32 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC3.39□□□□□ -1.87
CCDC71Q8IV32 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
CCDC71Q8IV32 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
CCDC71Q8IV32 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
CCDC71Q8IV32 RNU6-1261P-201ENST00000517194 104 ntBASIC3.39□□□□□ -1.87
CCDC71Q8IV32 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC3.39□□□□□ -1.87
CCDC71Q8IV32 AL139174.1-201ENST00000531489 886 ntBASIC3.39□□□□□ -1.87
CCDC71Q8IV32 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC3.39□□□□□ -1.87
CCDC71Q8IV32 AC011602.1-201ENST00000546484 331 ntBASIC3.39□□□□□ -1.87
CCDC71Q8IV32 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC3.39□□□□□ -1.87
CCDC71Q8IV32 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC3.39□□□□□ -1.87
CCDC71Q8IV32 AC006270.2-201ENST00000578523 652 ntBASIC3.39□□□□□ -1.87
CCDC71Q8IV32 AC022662.1-201ENST00000580252 331 ntBASIC3.39□□□□□ -1.87
CCDC71Q8IV32 AP001180.3-201ENST00000582221 145 ntBASIC3.39□□□□□ -1.87
CCDC71Q8IV32 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC3.39□□□□□ -1.87
CCDC71Q8IV32 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC3.39□□□□□ -1.87
CCDC71Q8IV32 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC3.39□□□□□ -1.87
CCDC71Q8IV32 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC3.39□□□□□ -1.87
CCDC71Q8IV32 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC3.39□□□□□ -1.87
CCDC71Q8IV32 GAS5-AS1-201ENST00000602767 694 ntBASIC3.39□□□□□ -1.87
CCDC71Q8IV32 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC3.39□□□□□ -1.87
CCDC71Q8IV32 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC3.39□□□□□ -1.87
CCDC71Q8IV32 AC096577.2-201ENST00000611455 153 ntBASIC3.39□□□□□ -1.87
CCDC71Q8IV32 AC015967.1-201ENST00000619893 476 ntBASIC3.39□□□□□ -1.87
CCDC71Q8IV32 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC3.39□□□□□ -1.87
CCDC71Q8IV32 AC138649.5-201ENST00000637456 137 ntBASIC3.39□□□□□ -1.87
CCDC71Q8IV32 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.39□□□□□ -1.87
CCDC71Q8IV32 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
CCDC71Q8IV32 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
CCDC71Q8IV32 AC138915.3-201ENST00000562908 1389 ntBASIC3.38□□□□□ -1.87
CCDC71Q8IV32 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.38□□□□□ -1.87
CCDC71Q8IV32 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
CCDC71Q8IV32 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.38□□□□□ -1.87
CCDC71Q8IV32 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.38□□□□□ -1.87
CCDC71Q8IV32 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
CCDC71Q8IV32 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
CCDC71Q8IV32 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
CCDC71Q8IV32 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC3.38□□□□□ -1.87
CCDC71Q8IV32 SNORA70E-201ENST00000384492 135 ntBASIC3.38□□□□□ -1.87
CCDC71Q8IV32 MIR513B-201ENST00000385136 84 ntBASIC3.38□□□□□ -1.87
CCDC71Q8IV32 SSXP10-201ENST00000402595 565 ntBASIC3.38□□□□□ -1.87
CCDC71Q8IV32 RPL23AP47-201ENST00000408017 460 ntBASIC3.38□□□□□ -1.87
CCDC71Q8IV32 RNU2-37P-201ENST00000410695 177 ntBASIC3.38□□□□□ -1.87
CCDC71Q8IV32 MTND4P22-201ENST00000413116 1169 ntBASIC3.38□□□□□ -1.87
CCDC71Q8IV32 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC3.38□□□□□ -1.87
CCDC71Q8IV32 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC3.38□□□□□ -1.87
CCDC71Q8IV32 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC3.38□□□□□ -1.87
CCDC71Q8IV32 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC3.38□□□□□ -1.87
CCDC71Q8IV32 CYCSP43-201ENST00000438233 310 ntBASIC3.38□□□□□ -1.87
CCDC71Q8IV32 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC3.38□□□□□ -1.87
CCDC71Q8IV32 RPS3AP12-201ENST00000443616 753 ntBASIC3.38□□□□□ -1.87
CCDC71Q8IV32 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC3.38□□□□□ -1.87
CCDC71Q8IV32 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC3.38□□□□□ -1.87
CCDC71Q8IV32 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC3.38□□□□□ -1.87
CCDC71Q8IV32 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC3.38□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 107.4 ms