Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 AC092078.2-201ENST00000560900 581 ntTSL 4 BASIC5.97□□□□□ -1.45
FOXR1Q6PIV2 AC060771.1-201ENST00000582031 164 ntBASIC5.97□□□□□ -1.45
FOXR1Q6PIV2 AC017100.2-201ENST00000584628 355 ntBASIC5.97□□□□□ -1.45
FOXR1Q6PIV2 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC5.97□□□□□ -1.45
FOXR1Q6PIV2 AC090621.1-201ENST00000592121 419 ntTSL 3 BASIC5.97□□□□□ -1.45
FOXR1Q6PIV2 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC5.97□□□□□ -1.45
FOXR1Q6PIV2 AC068768.2-201ENST00000602352 343 ntBASIC5.97□□□□□ -1.45
FOXR1Q6PIV2 AL512782.1-201ENST00000603093 364 ntBASIC5.97□□□□□ -1.45
FOXR1Q6PIV2 AC104763.2-201ENST00000604179 382 ntBASIC5.97□□□□□ -1.45
FOXR1Q6PIV2 RPL12P48-201ENST00000605620 304 ntBASIC5.97□□□□□ -1.45
FOXR1Q6PIV2 ATP5A1P2-202ENST00000616464 443 ntBASIC5.97□□□□□ -1.45
FOXR1Q6PIV2 5S_rRNA.28-201ENST00000638107 119 ntBASIC5.97□□□□□ -1.45
FOXR1Q6PIV2 ZNF566-202ENST00000424129 2644 ntAPPRIS P3 TSL 2 BASIC5.97□□□□□ -1.45
FOXR1Q6PIV2 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC5.97□□□□□ -1.45
FOXR1Q6PIV2 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
FOXR1Q6PIV2 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC5.97□□□□□ -1.45
FOXR1Q6PIV2 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC5.97□□□□□ -1.45
FOXR1Q6PIV2 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC5.97□□□□□ -1.45
FOXR1Q6PIV2 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC5.97□□□□□ -1.45
FOXR1Q6PIV2 TEK-205ENST00000615002 4666 ntTSL 5 BASIC5.97□□□□□ -1.45
FOXR1Q6PIV2 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
FOXR1Q6PIV2 MTCO1P24-201ENST00000515438 1558 ntBASIC5.97□□□□□ -1.45
FOXR1Q6PIV2 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
FOXR1Q6PIV2 GTSF1-209ENST00000552397 1621 ntAPPRIS P1 TSL 2 BASIC5.96□□□□□ -1.45
FOXR1Q6PIV2 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC5.96□□□□□ -1.45
FOXR1Q6PIV2 LINC00907-201ENST00000585627 3324 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
FOXR1Q6PIV2 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
FOXR1Q6PIV2 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.45
FOXR1Q6PIV2 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
FOXR1Q6PIV2 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC5.96□□□□□ -1.46
FOXR1Q6PIV2 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC5.96□□□□□ -1.46
FOXR1Q6PIV2 ZNF72P-201ENST00000425869 1908 ntBASIC5.96□□□□□ -1.46
FOXR1Q6PIV2 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC5.96□□□□□ -1.46
FOXR1Q6PIV2 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
FOXR1Q6PIV2 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
FOXR1Q6PIV2 SNORA21-201ENST00000362423 132 ntBASIC5.96□□□□□ -1.46
FOXR1Q6PIV2 Y_RNA.126-201ENST00000363382 111 ntBASIC5.96□□□□□ -1.46
FOXR1Q6PIV2 RNU6-82P-201ENST00000363970 107 ntBASIC5.96□□□□□ -1.46
FOXR1Q6PIV2 RNU6-1207P-201ENST00000384343 107 ntBASIC5.96□□□□□ -1.46
FOXR1Q6PIV2 U3.25-201ENST00000391209 220 ntBASIC5.96□□□□□ -1.46
FOXR1Q6PIV2 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
FOXR1Q6PIV2 AL133482.1-201ENST00000415988 498 ntBASIC5.96□□□□□ -1.46
FOXR1Q6PIV2 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC5.96□□□□□ -1.46
FOXR1Q6PIV2 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC5.96□□□□□ -1.46
FOXR1Q6PIV2 FTH1P1-201ENST00000437933 532 ntBASIC5.96□□□□□ -1.46
FOXR1Q6PIV2 HIGD1AP11-201ENST00000438361 280 ntBASIC5.96□□□□□ -1.46
FOXR1Q6PIV2 AC092647.2-201ENST00000452998 253 ntBASIC5.96□□□□□ -1.46
FOXR1Q6PIV2 AL021940.1-201ENST00000454271 677 ntTSL 2 BASIC5.96□□□□□ -1.46
FOXR1Q6PIV2 AC005008.1-201ENST00000456151 612 ntBASIC5.96□□□□□ -1.46
FOXR1Q6PIV2 CREM-226ENST00000469949 721 ntTSL 3 BASIC5.96□□□□□ -1.46
FOXR1Q6PIV2 RN7SL177P-201ENST00000476596 299 ntBASIC5.96□□□□□ -1.46
FOXR1Q6PIV2 RN7SL717P-201ENST00000478343 297 ntBASIC5.96□□□□□ -1.46
FOXR1Q6PIV2 AC093267.1-201ENST00000489176 961 ntBASIC5.96□□□□□ -1.46
FOXR1Q6PIV2 RNA5SP434-201ENST00000516647 121 ntBASIC5.96□□□□□ -1.46
FOXR1Q6PIV2 Y_RNA.715-201ENST00000517082 110 ntBASIC5.96□□□□□ -1.46
FOXR1Q6PIV2 AC027308.1-201ENST00000517993 110 ntBASIC5.96□□□□□ -1.46
FOXR1Q6PIV2 OR5D17P-201ENST00000531492 978 ntBASIC5.96□□□□□ -1.46
FOXR1Q6PIV2 AC068446.3-201ENST00000555285 382 ntBASIC5.96□□□□□ -1.46
FOXR1Q6PIV2 RPA2P1-201ENST00000556557 721 ntBASIC5.96□□□□□ -1.46
FOXR1Q6PIV2 AC051619.2-201ENST00000559063 397 ntBASIC5.96□□□□□ -1.46
FOXR1Q6PIV2 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC5.96□□□□□ -1.46
FOXR1Q6PIV2 SNORD39.2-201ENST00000579995 76 ntBASIC5.96□□□□□ -1.46
FOXR1Q6PIV2 MIR4443-201ENST00000585052 53 ntBASIC5.96□□□□□ -1.46
FOXR1Q6PIV2 AL031320.1-201ENST00000604177 357 ntBASIC5.96□□□□□ -1.46
FOXR1Q6PIV2 AL627230.1-201ENST00000613077 211 ntBASIC5.96□□□□□ -1.46
FOXR1Q6PIV2 MIR7159-201ENST00000620587 66 ntBASIC5.96□□□□□ -1.46
FOXR1Q6PIV2 AL049767.1-202ENST00000637826 242 ntBASIC5.96□□□□□ -1.46
FOXR1Q6PIV2 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC5.96□□□□□ -1.46
FOXR1Q6PIV2 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
FOXR1Q6PIV2 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC5.96□□□□□ -1.46
FOXR1Q6PIV2 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
FOXR1Q6PIV2 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
FOXR1Q6PIV2 OR55B1P-203ENST00000641518 2602 ntBASIC5.95□□□□□ -1.46
FOXR1Q6PIV2 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
FOXR1Q6PIV2 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
FOXR1Q6PIV2 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
FOXR1Q6PIV2 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
FOXR1Q6PIV2 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
FOXR1Q6PIV2 SPRR2B-201ENST00000368755 617 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
FOXR1Q6PIV2 RNU6-444P-201ENST00000383988 108 ntBASIC5.95□□□□□ -1.46
FOXR1Q6PIV2 RNU6-886P-201ENST00000384319 105 ntBASIC5.95□□□□□ -1.46
FOXR1Q6PIV2 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
FOXR1Q6PIV2 RPSAP35-201ENST00000413753 818 ntBASIC5.95□□□□□ -1.46
FOXR1Q6PIV2 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC5.95□□□□□ -1.46
FOXR1Q6PIV2 SNAP23P1-201ENST00000433229 246 ntBASIC5.95□□□□□ -1.46
FOXR1Q6PIV2 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC5.95□□□□□ -1.46
FOXR1Q6PIV2 PPIAP10-201ENST00000438675 458 ntBASIC5.95□□□□□ -1.46
FOXR1Q6PIV2 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC5.95□□□□□ -1.46
FOXR1Q6PIV2 CHEK2P4-201ENST00000450340 246 ntBASIC5.95□□□□□ -1.46
FOXR1Q6PIV2 GAS5-223ENST00000452197 483 ntTSL 3 BASIC5.95□□□□□ -1.46
FOXR1Q6PIV2 AC246785.3-201ENST00000455105 314 ntTSL 5 BASIC5.95□□□□□ -1.46
FOXR1Q6PIV2 MTCO3P2-201ENST00000457365 171 ntBASIC5.95□□□□□ -1.46
FOXR1Q6PIV2 MED28P2-201ENST00000475771 317 ntBASIC5.95□□□□□ -1.46
FOXR1Q6PIV2 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC5.95□□□□□ -1.46
FOXR1Q6PIV2 AC023424.1-201ENST00000496058 459 ntBASIC5.95□□□□□ -1.46
FOXR1Q6PIV2 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC5.95□□□□□ -1.46
FOXR1Q6PIV2 AC009901.1-201ENST00000506703 541 ntBASIC5.95□□□□□ -1.46
FOXR1Q6PIV2 AC026784.1-201ENST00000507986 352 ntBASIC5.95□□□□□ -1.46
FOXR1Q6PIV2 TBCAP3-201ENST00000512475 312 ntBASIC5.95□□□□□ -1.46
FOXR1Q6PIV2 EIF3KP3-201ENST00000514461 639 ntBASIC5.95□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 74.4 ms