Protein–RNA interactions for Protein: Q502W7

CCDC38, Coiled-coil domain-containing protein 38, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38Q502W7 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
CCDC38Q502W7 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC4.37□□□□□ -1.71
CCDC38Q502W7 RNU6-359P-201ENST00000365466 108 ntBASIC4.37□□□□□ -1.71
CCDC38Q502W7 MIR129-1-201ENST00000384972 72 ntBASIC4.37□□□□□ -1.71
CCDC38Q502W7 MIR141-201ENST00000384975 95 ntBASIC4.37□□□□□ -1.71
CCDC38Q502W7 RPS3AP26-201ENST00000398259 784 ntBASIC4.37□□□□□ -1.71
CCDC38Q502W7 AL356421.1-201ENST00000403255 413 ntBASIC4.37□□□□□ -1.71
CCDC38Q502W7 AL138880.1-201ENST00000405824 642 ntBASIC4.37□□□□□ -1.71
CCDC38Q502W7 MOB4-205ENST00000409916 829 ntTSL 3 BASIC4.37□□□□□ -1.71
CCDC38Q502W7 FAR2P2-201ENST00000413041 594 ntBASIC4.37□□□□□ -1.71
CCDC38Q502W7 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC4.37□□□□□ -1.71
CCDC38Q502W7 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC4.37□□□□□ -1.71
CCDC38Q502W7 HSFY4P-201ENST00000415994 1181 ntBASIC4.37□□□□□ -1.71
CCDC38Q502W7 RAD23BP2-201ENST00000416003 1207 ntBASIC4.37□□□□□ -1.71
CCDC38Q502W7 MTCO3P12-201ENST00000416718 547 ntBASIC4.37□□□□□ -1.71
CCDC38Q502W7 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC4.37□□□□□ -1.71
CCDC38Q502W7 EIF1P3-201ENST00000423841 334 ntBASIC4.37□□□□□ -1.71
CCDC38Q502W7 DNAJC19P7-201ENST00000428811 344 ntBASIC4.37□□□□□ -1.71
CCDC38Q502W7 AC016712.1-201ENST00000431088 378 ntBASIC4.37□□□□□ -1.71
CCDC38Q502W7 RSU1P2-202ENST00000437884 485 ntBASIC4.37□□□□□ -1.71
CCDC38Q502W7 UBE2D3P4-201ENST00000441973 436 ntBASIC4.37□□□□□ -1.71
CCDC38Q502W7 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC4.37□□□□□ -1.71
CCDC38Q502W7 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC4.37□□□□□ -1.71
CCDC38Q502W7 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC4.37□□□□□ -1.71
CCDC38Q502W7 MTND3P7-201ENST00000474435 343 ntBASIC4.37□□□□□ -1.71
CCDC38Q502W7 CEACAMP10-202ENST00000495431 496 ntBASIC4.37□□□□□ -1.71
CCDC38Q502W7 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC4.37□□□□□ -1.71
CCDC38Q502W7 OR2A20P-203ENST00000498397 1268 ntBASIC4.37□□□□□ -1.71
CCDC38Q502W7 AK3P4-201ENST00000504283 583 ntBASIC4.37□□□□□ -1.71
CCDC38Q502W7 AC139713.2-213ENST00000505000 796 ntTSL 2 BASIC4.37□□□□□ -1.71
CCDC38Q502W7 AC023141.12-201ENST00000512399 199 ntBASIC4.37□□□□□ -1.71
CCDC38Q502W7 RNU6-1095P-201ENST00000516148 108 ntBASIC4.37□□□□□ -1.71
CCDC38Q502W7 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC4.37□□□□□ -1.71
CCDC38Q502W7 AC006064.5-201ENST00000541782 248 ntBASIC4.37□□□□□ -1.71
CCDC38Q502W7 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC4.37□□□□□ -1.71
CCDC38Q502W7 AC023161.2-201ENST00000551218 780 ntBASIC4.37□□□□□ -1.71
CCDC38Q502W7 AC126177.3-201ENST00000551839 688 ntBASIC4.37□□□□□ -1.71
CCDC38Q502W7 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC4.37□□□□□ -1.71
CCDC38Q502W7 AL109766.1-201ENST00000555080 552 ntBASIC4.37□□□□□ -1.71
CCDC38Q502W7 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC4.37□□□□□ -1.71
CCDC38Q502W7 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC4.37□□□□□ -1.71
CCDC38Q502W7 PCMTD1P2-201ENST00000565017 355 ntBASIC4.37□□□□□ -1.71
CCDC38Q502W7 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC4.37□□□□□ -1.71
CCDC38Q502W7 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC4.37□□□□□ -1.71
CCDC38Q502W7 MIR544B-201ENST00000582372 78 ntBASIC4.37□□□□□ -1.71
CCDC38Q502W7 AC097065.2-201ENST00000608159 533 ntBASIC4.37□□□□□ -1.71
CCDC38Q502W7 AC064801.1-201ENST00000612025 407 ntBASIC4.37□□□□□ -1.71
CCDC38Q502W7 AC008443.7-201ENST00000622195 246 ntBASIC4.37□□□□□ -1.71
CCDC38Q502W7 AP000346.3-201ENST00000622821 210 ntBASIC4.37□□□□□ -1.71
CCDC38Q502W7 AL356266.1-201ENST00000623311 483 ntBASIC4.37□□□□□ -1.71
CCDC38Q502W7 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
CCDC38Q502W7 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
CCDC38Q502W7 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC4.37□□□□□ -1.71
CCDC38Q502W7 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
CCDC38Q502W7 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
CCDC38Q502W7 THUMPD3P1-201ENST00000506556 1480 ntBASIC4.37□□□□□ -1.71
CCDC38Q502W7 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC4.36□□□□□ -1.71
CCDC38Q502W7 OR56B2P-202ENST00000641377 2453 ntBASIC4.36□□□□□ -1.71
CCDC38Q502W7 MARK2P15-201ENST00000432204 2186 ntBASIC4.36□□□□□ -1.71
CCDC38Q502W7 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC4.36□□□□□ -1.71
CCDC38Q502W7 RNA5SP175-201ENST00000364275 119 ntBASIC4.36□□□□□ -1.71
CCDC38Q502W7 SNORA7.2-201ENST00000364446 145 ntBASIC4.36□□□□□ -1.71
CCDC38Q502W7 ESD-201ENST00000378697 1079 ntTSL 5 BASIC4.36□□□□□ -1.71
CCDC38Q502W7 RNU2-47P-201ENST00000410649 186 ntBASIC4.36□□□□□ -1.71
CCDC38Q502W7 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC4.36□□□□□ -1.71
CCDC38Q502W7 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC4.36□□□□□ -1.71
CCDC38Q502W7 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC4.36□□□□□ -1.71
CCDC38Q502W7 RPL23AP52-201ENST00000439311 478 ntBASIC4.36□□□□□ -1.71
CCDC38Q502W7 NPM1P49-201ENST00000448027 714 ntBASIC4.36□□□□□ -1.71
CCDC38Q502W7 AP000542.1-201ENST00000448473 371 ntBASIC4.36□□□□□ -1.71
CCDC38Q502W7 SETP11-201ENST00000473027 690 ntBASIC4.36□□□□□ -1.71
CCDC38Q502W7 RN7SL481P-201ENST00000477764 299 ntBASIC4.36□□□□□ -1.71
CCDC38Q502W7 AC006517.1-201ENST00000480485 328 ntBASIC4.36□□□□□ -1.71
CCDC38Q502W7 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC4.36□□□□□ -1.71
CCDC38Q502W7 RPS4XP15-201ENST00000489210 795 ntBASIC4.36□□□□□ -1.71
CCDC38Q502W7 AC034222.1-201ENST00000494052 532 ntBASIC4.36□□□□□ -1.71
CCDC38Q502W7 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
CCDC38Q502W7 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC4.36□□□□□ -1.71
CCDC38Q502W7 LINC02231-201ENST00000510459 447 ntTSL 3 BASIC4.36□□□□□ -1.71
CCDC38Q502W7 AC005921.1-201ENST00000510589 286 ntBASIC4.36□□□□□ -1.71
CCDC38Q502W7 AC108064.1-201ENST00000513791 460 ntBASIC4.36□□□□□ -1.71
CCDC38Q502W7 AC106038.2-201ENST00000520706 568 ntBASIC4.36□□□□□ -1.71
CCDC38Q502W7 AC013828.2-201ENST00000532487 235 ntBASIC4.36□□□□□ -1.71
CCDC38Q502W7 AC018630.1-201ENST00000541376 925 ntBASIC4.36□□□□□ -1.71
CCDC38Q502W7 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC4.36□□□□□ -1.71
CCDC38Q502W7 CR383656.7-201ENST00000548164 174 ntBASIC4.36□□□□□ -1.71
CCDC38Q502W7 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC4.36□□□□□ -1.71
CCDC38Q502W7 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC4.36□□□□□ -1.71
CCDC38Q502W7 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC4.36□□□□□ -1.71
CCDC38Q502W7 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC4.36□□□□□ -1.71
CCDC38Q502W7 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC4.36□□□□□ -1.71
CCDC38Q502W7 AC234771.5-201ENST00000600161 514 ntBASIC4.36□□□□□ -1.71
CCDC38Q502W7 AL031176.1-201ENST00000604554 466 ntBASIC4.36□□□□□ -1.71
CCDC38Q502W7 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC4.36□□□□□ -1.71
CCDC38Q502W7 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC4.36□□□□□ -1.71
CCDC38Q502W7 AC103710.4-201ENST00000609301 899 ntBASIC4.36□□□□□ -1.71
CCDC38Q502W7 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC4.36□□□□□ -1.71
CCDC38Q502W7 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC4.36□□□□□ -1.71
CCDC38Q502W7 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC4.36□□□□□ -1.71
CCDC38Q502W7 AC095050.2-201ENST00000510748 1458 ntBASIC4.36□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 83.4 ms