Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC6.34□□□□□ -1.4
CTC1Q2NKJ3 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC6.34□□□□□ -1.4
CTC1Q2NKJ3 AOX3P-204ENST00000491025 2107 ntBASIC6.34□□□□□ -1.4
CTC1Q2NKJ3 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.4
CTC1Q2NKJ3 PUM2-201ENST00000319801 6002 ntTSL 1 (best) BASIC6.34□□□□□ -1.4
CTC1Q2NKJ3 ATP10D-201ENST00000273859 6655 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.4
CTC1Q2NKJ3 ACACA-240ENST00000617649 7912 ntTSL 5 BASIC6.34□□□□□ -1.4
CTC1Q2NKJ3 C16orf62-204ENST00000448695 3353 ntTSL 5 BASIC6.34□□□□□ -1.4
CTC1Q2NKJ3 C16orf62-216ENST00000543152 3352 ntTSL 1 (best) BASIC6.34□□□□□ -1.4
CTC1Q2NKJ3 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
CTC1Q2NKJ3 CCDC186-203ENST00000369287 7245 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
CTC1Q2NKJ3 SORCS1-209ENST00000612154 6862 ntTSL 5 BASIC6.33□□□□□ -1.4
CTC1Q2NKJ3 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
CTC1Q2NKJ3 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC6.33□□□□□ -1.4
CTC1Q2NKJ3 ZC3H12C-202ENST00000453089 9542 ntTSL 2 BASIC6.33□□□□□ -1.4
CTC1Q2NKJ3 MAGI2-205ENST00000519748 3316 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
CTC1Q2NKJ3 AC087516.1-201ENST00000561236 2428 ntBASIC6.33□□□□□ -1.4
CTC1Q2NKJ3 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC6.33□□□□□ -1.4
CTC1Q2NKJ3 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
CTC1Q2NKJ3 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
CTC1Q2NKJ3 PRB3-201ENST00000381842 1091 ntAPPRIS ALT2 TSL 5 BASIC6.33□□□□□ -1.4
CTC1Q2NKJ3 MIR137-201ENST00000385223 102 ntBASIC6.33□□□□□ -1.4
CTC1Q2NKJ3 AC097374.1-203ENST00000400783 485 ntBASIC6.33□□□□□ -1.4
CTC1Q2NKJ3 AL583834.1-201ENST00000406943 343 ntBASIC6.33□□□□□ -1.4
CTC1Q2NKJ3 RNU2-22P-201ENST00000411266 212 ntBASIC6.33□□□□□ -1.4
CTC1Q2NKJ3 RPL31P45-201ENST00000419532 356 ntBASIC6.33□□□□□ -1.4
CTC1Q2NKJ3 UBE2D3P2-201ENST00000424409 445 ntBASIC6.33□□□□□ -1.4
CTC1Q2NKJ3 AC016027.5-201ENST00000427227 210 ntBASIC6.33□□□□□ -1.4
CTC1Q2NKJ3 AC126120.1-201ENST00000431082 470 ntBASIC6.33□□□□□ -1.4
CTC1Q2NKJ3 TIMM9P1-201ENST00000436122 256 ntBASIC6.33□□□□□ -1.4
CTC1Q2NKJ3 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC6.33□□□□□ -1.4
CTC1Q2NKJ3 AC116533.1-201ENST00000459748 321 ntBASIC6.33□□□□□ -1.4
CTC1Q2NKJ3 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC6.33□□□□□ -1.4
CTC1Q2NKJ3 SNRPCP3-201ENST00000474888 476 ntBASIC6.33□□□□□ -1.4
CTC1Q2NKJ3 RPS17P15-201ENST00000475609 349 ntBASIC6.33□□□□□ -1.4
CTC1Q2NKJ3 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC6.33□□□□□ -1.4
CTC1Q2NKJ3 UBA52P7-201ENST00000486088 380 ntBASIC6.33□□□□□ -1.4
CTC1Q2NKJ3 AL035690.1-201ENST00000490892 383 ntBASIC6.33□□□□□ -1.4
CTC1Q2NKJ3 AKIRIN2P1-201ENST00000505898 352 ntBASIC6.33□□□□□ -1.4
CTC1Q2NKJ3 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC6.33□□□□□ -1.4
CTC1Q2NKJ3 SNORA43.3-201ENST00000517240 103 ntBASIC6.33□□□□□ -1.4
CTC1Q2NKJ3 CYCSP28-201ENST00000534284 321 ntBASIC6.33□□□□□ -1.4
CTC1Q2NKJ3 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC6.33□□□□□ -1.4
CTC1Q2NKJ3 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC6.33□□□□□ -1.4
CTC1Q2NKJ3 LARP7P2-201ENST00000575306 125 ntBASIC6.33□□□□□ -1.4
CTC1Q2NKJ3 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC6.33□□□□□ -1.4
CTC1Q2NKJ3 AC011477.5-201ENST00000586571 259 ntBASIC6.33□□□□□ -1.4
CTC1Q2NKJ3 AL078605.1-201ENST00000603529 500 ntBASIC6.33□□□□□ -1.4
CTC1Q2NKJ3 AC024940.4-201ENST00000605507 246 ntBASIC6.33□□□□□ -1.4
CTC1Q2NKJ3 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC6.33□□□□□ -1.4
CTC1Q2NKJ3 AL357559.1-201ENST00000622228 274 ntBASIC6.33□□□□□ -1.4
CTC1Q2NKJ3 CCL14-204ENST00000622526 472 ntTSL 3 BASIC6.33□□□□□ -1.4
CTC1Q2NKJ3 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC6.33□□□□□ -1.4
CTC1Q2NKJ3 AC092692.1-201ENST00000623625 2595 ntBASIC6.33□□□□□ -1.4
CTC1Q2NKJ3 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
CTC1Q2NKJ3 DNAJC15-201ENST00000379221 7853 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
CTC1Q2NKJ3 AC104024.1-201ENST00000428142 2201 ntTSL 2 BASIC6.33□□□□□ -1.4
CTC1Q2NKJ3 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC6.33□□□□□ -1.4
CTC1Q2NKJ3 METTL6-203ENST00000443029 4020 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
CTC1Q2NKJ3 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC6.32□□□□□ -1.4
CTC1Q2NKJ3 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC6.32□□□□□ -1.4
CTC1Q2NKJ3 DPH5-203ENST00000370109 1316 ntAPPRIS P4 TSL 1 (best) BASIC6.32□□□□□ -1.4
CTC1Q2NKJ3 AC090740.1-201ENST00000623193 2262 ntBASIC6.32□□□□□ -1.4
CTC1Q2NKJ3 RNU4-50P-201ENST00000364361 141 ntBASIC6.32□□□□□ -1.4
CTC1Q2NKJ3 RNU6-153P-201ENST00000364422 104 ntBASIC6.32□□□□□ -1.4
CTC1Q2NKJ3 RNU6-804P-201ENST00000384286 107 ntBASIC6.32□□□□□ -1.4
CTC1Q2NKJ3 RNU6-959P-201ENST00000384671 107 ntBASIC6.32□□□□□ -1.4
CTC1Q2NKJ3 MIR215-201ENST00000384858 110 ntBASIC6.32□□□□□ -1.4
CTC1Q2NKJ3 MIR585-201ENST00000384887 94 ntBASIC6.32□□□□□ -1.4
CTC1Q2NKJ3 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC6.32□□□□□ -1.4
CTC1Q2NKJ3 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC6.32□□□□□ -1.4
CTC1Q2NKJ3 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC6.32□□□□□ -1.4
CTC1Q2NKJ3 AC114495.1-201ENST00000441274 436 ntBASIC6.32□□□□□ -1.4
CTC1Q2NKJ3 RPL36AP15-201ENST00000444514 266 ntBASIC6.32□□□□□ -1.4
CTC1Q2NKJ3 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC6.32□□□□□ -1.4
CTC1Q2NKJ3 EEF1B2P6-201ENST00000445713 673 ntBASIC6.32□□□□□ -1.4
CTC1Q2NKJ3 NUTF2P3-201ENST00000448540 384 ntBASIC6.32□□□□□ -1.4
CTC1Q2NKJ3 RPS27AP3-201ENST00000453803 454 ntBASIC6.32□□□□□ -1.4
CTC1Q2NKJ3 AL136097.1-201ENST00000456945 913 ntBASIC6.32□□□□□ -1.4
CTC1Q2NKJ3 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC6.32□□□□□ -1.4
CTC1Q2NKJ3 RPS23P6-201ENST00000466136 431 ntBASIC6.32□□□□□ -1.4
CTC1Q2NKJ3 AC109925.1-201ENST00000478069 331 ntBASIC6.32□□□□□ -1.4
CTC1Q2NKJ3 AC109481.1-201ENST00000509173 282 ntBASIC6.32□□□□□ -1.4
CTC1Q2NKJ3 IL7R-208ENST00000511982 612 ntTSL 2 BASIC6.32□□□□□ -1.4
CTC1Q2NKJ3 RPS27AP18-201ENST00000515536 459 ntBASIC6.32□□□□□ -1.4
CTC1Q2NKJ3 TXNRD1-212ENST00000526390 3808 ntTSL 5 BASIC6.32□□□□□ -1.4
CTC1Q2NKJ3 AC011603.3-201ENST00000549516 279 ntTSL 3 BASIC6.32□□□□□ -1.4
CTC1Q2NKJ3 AC004584.2-201ENST00000570407 410 ntBASIC6.32□□□□□ -1.4
CTC1Q2NKJ3 MIR4433B-201ENST00000581329 102 ntBASIC6.32□□□□□ -1.4
CTC1Q2NKJ3 AC027229.1-201ENST00000583887 253 ntBASIC6.32□□□□□ -1.4
CTC1Q2NKJ3 MIR5692C1-201ENST00000585309 91 ntBASIC6.32□□□□□ -1.4
CTC1Q2NKJ3 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
CTC1Q2NKJ3 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC6.32□□□□□ -1.4
CTC1Q2NKJ3 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC6.32□□□□□ -1.4
CTC1Q2NKJ3 HECW2-201ENST00000260983 11809 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
CTC1Q2NKJ3 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC6.32□□□□□ -1.4
CTC1Q2NKJ3 ZNF521-201ENST00000361524 4871 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
CTC1Q2NKJ3 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC6.32□□□□□ -1.4
CTC1Q2NKJ3 PSG1-206ENST00000595356 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
CTC1Q2NKJ3 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC6.32□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 111.5 ms