Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 RNU7-170P-201ENST00000459303 61 ntBASIC1.48□□□□□ -2.17
HSPG2P98160 AC026436.1-201ENST00000510537 270 ntBASIC1.48□□□□□ -2.17
HSPG2P98160 AC108078.2-201ENST00000510750 236 ntBASIC1.48□□□□□ -2.17
HSPG2P98160 RNA5SP380-201ENST00000517190 98 ntBASIC1.48□□□□□ -2.17
HSPG2P98160 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC1.48□□□□□ -2.17
HSPG2P98160 AC004825.2-201ENST00000616634 455 ntBASIC1.48□□□□□ -2.17
HSPG2P98160 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC1.48□□□□□ -2.17
HSPG2P98160 AC025125.1-201ENST00000624743 1922 ntBASIC1.48□□□□□ -2.17
HSPG2P98160 AC092881.1-201ENST00000638218 2733 ntBASIC1.48□□□□□ -2.17
HSPG2P98160 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC1.48□□□□□ -2.17
HSPG2P98160 MIR137-201ENST00000385223 102 ntBASIC1.48□□□□□ -2.17
HSPG2P98160 AC069218.2-201ENST00000411665 344 ntBASIC1.48□□□□□ -2.17
HSPG2P98160 AL445646.1-201ENST00000431784 216 ntBASIC1.48□□□□□ -2.17
HSPG2P98160 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC1.48□□□□□ -2.17
HSPG2P98160 VTRNA2-2P-201ENST00000516091 103 ntBASIC1.48□□□□□ -2.17
HSPG2P98160 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
HSPG2P98160 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC1.48□□□□□ -2.17
HSPG2P98160 OR5M3-201ENST00000312240 1051 ntAPPRIS P1 BASIC1.48□□□□□ -2.17
HSPG2P98160 RNU6-805P-201ENST00000365643 106 ntBASIC1.48□□□□□ -2.17
HSPG2P98160 THAP6-203ENST00000502620 582 ntTSL 3 BASIC1.48□□□□□ -2.17
HSPG2P98160 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC1.48□□□□□ -2.17
HSPG2P98160 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC1.48□□□□□ -2.17
HSPG2P98160 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC1.48□□□□□ -2.17
HSPG2P98160 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC1.48□□□□□ -2.17
HSPG2P98160 AC016717.2-201ENST00000609089 5141 ntBASIC1.48□□□□□ -2.17
HSPG2P98160 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC1.48□□□□□ -2.17
HSPG2P98160 B3GALNT1P1-201ENST00000420569 975 ntBASIC1.47□□□□□ -2.17
HSPG2P98160 Z82205.1-201ENST00000428456 297 ntBASIC1.47□□□□□ -2.17
HSPG2P98160 AL365396.1-201ENST00000430854 671 ntBASIC1.47□□□□□ -2.17
HSPG2P98160 AC004866.2-201ENST00000438285 481 ntBASIC1.47□□□□□ -2.17
HSPG2P98160 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC1.47□□□□□ -2.17
HSPG2P98160 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC1.47□□□□□ -2.17
HSPG2P98160 VN1R17P-201ENST00000472048 1090 ntBASIC1.47□□□□□ -2.17
HSPG2P98160 RN7SL633P-201ENST00000488974 297 ntBASIC1.47□□□□□ -2.17
HSPG2P98160 RAC1P5-201ENST00000512182 576 ntBASIC1.47□□□□□ -2.17
HSPG2P98160 AP000919.1-202ENST00000581139 1264 ntBASIC1.47□□□□□ -2.17
HSPG2P98160 AL365503.1-201ENST00000605247 905 ntBASIC1.47□□□□□ -2.17
HSPG2P98160 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC1.47□□□□□ -2.17
HSPG2P98160 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC1.47□□□□□ -2.17
HSPG2P98160 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC1.47□□□□□ -2.17
HSPG2P98160 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
HSPG2P98160 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC1.47□□□□□ -2.17
HSPG2P98160 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC1.47□□□□□ -2.17
HSPG2P98160 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.47□□□□□ -2.17
HSPG2P98160 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC1.47□□□□□ -2.17
HSPG2P98160 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC1.47□□□□□ -2.17
HSPG2P98160 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC1.47□□□□□ -2.17
HSPG2P98160 RNA5SP383-201ENST00000362934 120 ntBASIC1.47□□□□□ -2.17
HSPG2P98160 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC1.47□□□□□ -2.17
HSPG2P98160 RPL21P3-201ENST00000395517 478 ntBASIC1.47□□□□□ -2.17
HSPG2P98160 RNU6-1140P-201ENST00000410517 106 ntBASIC1.47□□□□□ -2.17
HSPG2P98160 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC1.47□□□□□ -2.17
HSPG2P98160 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC1.47□□□□□ -2.17
HSPG2P98160 AL589765.3-201ENST00000446084 462 ntBASIC1.47□□□□□ -2.17
HSPG2P98160 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC1.47□□□□□ -2.17
HSPG2P98160 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC1.47□□□□□ -2.17
HSPG2P98160 AC009137.2-201ENST00000568179 641 ntTSL 3 BASIC1.47□□□□□ -2.17
HSPG2P98160 AL353684.1-201ENST00000622677 1120 ntBASIC1.47□□□□□ -2.17
HSPG2P98160 PSMD5-AS1-215ENST00000640622 205 ntBASIC1.47□□□□□ -2.17
HSPG2P98160 PROS2P-201ENST00000474651 1951 ntBASIC1.47□□□□□ -2.17
HSPG2P98160 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
HSPG2P98160 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
HSPG2P98160 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
HSPG2P98160 SNORA67.3-201ENST00000384366 140 ntBASIC1.47□□□□□ -2.17
HSPG2P98160 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
HSPG2P98160 USP9YP20-201ENST00000419224 558 ntBASIC1.47□□□□□ -2.17
HSPG2P98160 AC009238.1-201ENST00000442165 424 ntBASIC1.47□□□□□ -2.17
HSPG2P98160 AC009237.6-201ENST00000446969 424 ntBASIC1.47□□□□□ -2.17
HSPG2P98160 NIPA2P2-201ENST00000496376 1083 ntBASIC1.47□□□□□ -2.17
HSPG2P98160 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
HSPG2P98160 AP001207.1-201ENST00000524051 481 ntBASIC1.47□□□□□ -2.17
HSPG2P98160 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC1.47□□□□□ -2.17
HSPG2P98160 MTCYBP28-201ENST00000566728 1132 ntBASIC1.47□□□□□ -2.17
HSPG2P98160 AL022099.1-201ENST00000604551 712 ntBASIC1.47□□□□□ -2.17
HSPG2P98160 AC069234.5-201ENST00000611056 416 ntBASIC1.47□□□□□ -2.17
HSPG2P98160 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
HSPG2P98160 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC1.47□□□□□ -2.17
HSPG2P98160 RNA5SP502-201ENST00000362694 119 ntBASIC1.47□□□□□ -2.17
HSPG2P98160 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC1.47□□□□□ -2.17
HSPG2P98160 RPS7P9-201ENST00000414704 586 ntBASIC1.47□□□□□ -2.17
HSPG2P98160 RPS15AP28-201ENST00000435088 386 ntBASIC1.47□□□□□ -2.17
HSPG2P98160 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC1.47□□□□□ -2.17
HSPG2P98160 OR4T1P-201ENST00000554933 911 ntBASIC1.47□□□□□ -2.17
HSPG2P98160 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC1.47□□□□□ -2.17
HSPG2P98160 PSMG2-204ENST00000585331 983 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
HSPG2P98160 AC061975.8-201ENST00000587058 721 ntBASIC1.47□□□□□ -2.17
HSPG2P98160 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
HSPG2P98160 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC1.46□□□□□ -2.18
HSPG2P98160 RNA5SP296-201ENST00000410523 111 ntBASIC1.46□□□□□ -2.18
HSPG2P98160 AC080125.1-201ENST00000414888 684 ntBASIC1.46□□□□□ -2.18
HSPG2P98160 SPA17P1-201ENST00000416656 452 ntBASIC1.46□□□□□ -2.18
HSPG2P98160 RPL23AP42-201ENST00000471152 471 ntBASIC1.46□□□□□ -2.18
HSPG2P98160 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC1.46□□□□□ -2.18
HSPG2P98160 MIR2114-201ENST00000516645 80 ntBASIC1.46□□□□□ -2.18
HSPG2P98160 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC1.46□□□□□ -2.18
HSPG2P98160 MIR6733-201ENST00000635723 61 ntBASIC1.46□□□□□ -2.18
HSPG2P98160 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.46□□□□□ -2.18
HSPG2P98160 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC1.46□□□□□ -2.18
HSPG2P98160 MTND5P19-201ENST00000424872 1794 ntBASIC1.46□□□□□ -2.18
HSPG2P98160 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC1.46□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 102.4 ms