Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
CX3CL1P78423 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
CX3CL1P78423 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC3.42□□□□□ -1.86
CX3CL1P78423 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC3.42□□□□□ -1.86
CX3CL1P78423 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC3.42□□□□□ -1.86
CX3CL1P78423 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC3.42□□□□□ -1.86
CX3CL1P78423 OR11H4-201ENST00000315409 1082 ntBASIC3.42□□□□□ -1.86
CX3CL1P78423 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
CX3CL1P78423 RNU4-21P-201ENST00000362802 126 ntBASIC3.42□□□□□ -1.86
CX3CL1P78423 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
CX3CL1P78423 RPS3AP26-201ENST00000398259 784 ntBASIC3.42□□□□□ -1.86
CX3CL1P78423 RNU2-47P-201ENST00000410649 186 ntBASIC3.42□□□□□ -1.86
CX3CL1P78423 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC3.42□□□□□ -1.86
CX3CL1P78423 TOMM22P1-201ENST00000418578 312 ntBASIC3.42□□□□□ -1.86
CX3CL1P78423 AL389915.1-201ENST00000422463 466 ntBASIC3.42□□□□□ -1.86
CX3CL1P78423 RBMY1KP-201ENST00000423480 476 ntBASIC3.42□□□□□ -1.86
CX3CL1P78423 BX119904.4-201ENST00000424402 301 ntBASIC3.42□□□□□ -1.86
CX3CL1P78423 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC3.42□□□□□ -1.86
CX3CL1P78423 RPS29P17-201ENST00000430795 166 ntBASIC3.42□□□□□ -1.86
CX3CL1P78423 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC3.42□□□□□ -1.86
CX3CL1P78423 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC3.42□□□□□ -1.86
CX3CL1P78423 MTND4P32-201ENST00000437189 1237 ntBASIC3.42□□□□□ -1.86
CX3CL1P78423 RPL23AP52-201ENST00000439311 478 ntBASIC3.42□□□□□ -1.86
CX3CL1P78423 AL512326.1-201ENST00000443050 721 ntBASIC3.42□□□□□ -1.86
CX3CL1P78423 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC3.42□□□□□ -1.86
CX3CL1P78423 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC3.42□□□□□ -1.86
CX3CL1P78423 ABCF2P2-201ENST00000450549 296 ntBASIC3.42□□□□□ -1.86
CX3CL1P78423 HMGB3P30-201ENST00000457863 606 ntBASIC3.42□□□□□ -1.86
CX3CL1P78423 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC3.42□□□□□ -1.86
CX3CL1P78423 ST13P14-201ENST00000474095 734 ntBASIC3.42□□□□□ -1.86
CX3CL1P78423 AP000926.1-201ENST00000479573 241 ntBASIC3.42□□□□□ -1.86
CX3CL1P78423 AC078817.1-201ENST00000492623 435 ntBASIC3.42□□□□□ -1.86
CX3CL1P78423 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC3.42□□□□□ -1.86
CX3CL1P78423 AC146944.2-203ENST00000502493 354 ntBASIC3.42□□□□□ -1.86
CX3CL1P78423 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC3.42□□□□□ -1.86
CX3CL1P78423 AC017037.1-201ENST00000508460 471 ntBASIC3.42□□□□□ -1.86
CX3CL1P78423 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC3.42□□□□□ -1.86
CX3CL1P78423 AC139495.1-202ENST00000513164 354 ntBASIC3.42□□□□□ -1.86
CX3CL1P78423 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC3.42□□□□□ -1.86
CX3CL1P78423 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC3.42□□□□□ -1.86
CX3CL1P78423 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC3.42□□□□□ -1.86
CX3CL1P78423 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
CX3CL1P78423 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC3.42□□□□□ -1.86
CX3CL1P78423 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC3.42□□□□□ -1.86
CX3CL1P78423 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC3.42□□□□□ -1.86
CX3CL1P78423 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC3.42□□□□□ -1.86
CX3CL1P78423 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC3.42□□□□□ -1.86
CX3CL1P78423 AL360157.1-201ENST00000565962 87 ntBASIC3.42□□□□□ -1.86
CX3CL1P78423 AC091489.2-201ENST00000566263 604 ntBASIC3.42□□□□□ -1.86
CX3CL1P78423 MIR4307-201ENST00000582802 84 ntBASIC3.42□□□□□ -1.86
CX3CL1P78423 MIR5096-201ENST00000583713 70 ntBASIC3.42□□□□□ -1.86
CX3CL1P78423 AC010928.3-201ENST00000587712 541 ntBASIC3.42□□□□□ -1.86
CX3CL1P78423 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC3.42□□□□□ -1.86
CX3CL1P78423 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
CX3CL1P78423 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC3.42□□□□□ -1.86
CX3CL1P78423 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
CX3CL1P78423 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
CX3CL1P78423 AC008745.1-201ENST00000604064 271 ntBASIC3.42□□□□□ -1.86
CX3CL1P78423 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
CX3CL1P78423 AC073114.1-201ENST00000612027 490 ntBASIC3.42□□□□□ -1.86
CX3CL1P78423 AC007546.1-201ENST00000619452 559 ntBASIC3.42□□□□□ -1.86
CX3CL1P78423 Z69908.1-201ENST00000622603 247 ntBASIC3.42□□□□□ -1.86
CX3CL1P78423 AL356585.4-201ENST00000623078 1229 ntBASIC3.42□□□□□ -1.86
CX3CL1P78423 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
CX3CL1P78423 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.42□□□□□ -1.86
CX3CL1P78423 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
CX3CL1P78423 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.42□□□□□ -1.86
CX3CL1P78423 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
CX3CL1P78423 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
CX3CL1P78423 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.42□□□□□ -1.86
CX3CL1P78423 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.42□□□□□ -1.86
CX3CL1P78423 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC3.42□□□□□ -1.86
CX3CL1P78423 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
CX3CL1P78423 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
CX3CL1P78423 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
CX3CL1P78423 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
CX3CL1P78423 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
CX3CL1P78423 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
CX3CL1P78423 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
CX3CL1P78423 RNU6-97P-201ENST00000363387 104 ntBASIC3.41□□□□□ -1.86
CX3CL1P78423 SNORD116-9-201ENST00000384000 95 ntBASIC3.41□□□□□ -1.86
CX3CL1P78423 SNORD116-3-201ENST00000384287 95 ntBASIC3.41□□□□□ -1.86
CX3CL1P78423 SNORD116-7-201ENST00000384404 95 ntBASIC3.41□□□□□ -1.86
CX3CL1P78423 SNORD116-5-201ENST00000384462 95 ntBASIC3.41□□□□□ -1.86
CX3CL1P78423 U3.22-201ENST00000391120 215 ntBASIC3.41□□□□□ -1.86
CX3CL1P78423 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC3.41□□□□□ -1.86
CX3CL1P78423 RNA5SP306-201ENST00000411087 107 ntBASIC3.41□□□□□ -1.86
CX3CL1P78423 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC3.41□□□□□ -1.86
CX3CL1P78423 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC3.41□□□□□ -1.86
CX3CL1P78423 AL161631.1-201ENST00000417933 486 ntBASIC3.41□□□□□ -1.86
CX3CL1P78423 FTH1P6-201ENST00000430768 320 ntBASIC3.41□□□□□ -1.86
CX3CL1P78423 AC098826.1-201ENST00000433943 471 ntBASIC3.41□□□□□ -1.86
CX3CL1P78423 TRIM60P18-201ENST00000441518 828 ntBASIC3.41□□□□□ -1.86
CX3CL1P78423 GDI2P2-201ENST00000445131 608 ntBASIC3.41□□□□□ -1.86
CX3CL1P78423 BMI1P1-201ENST00000445879 941 ntBASIC3.41□□□□□ -1.86
CX3CL1P78423 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC3.41□□□□□ -1.86
CX3CL1P78423 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC3.41□□□□□ -1.86
CX3CL1P78423 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC3.41□□□□□ -1.86
CX3CL1P78423 RPL31P3-201ENST00000458430 332 ntBASIC3.41□□□□□ -1.86
CX3CL1P78423 AC034222.1-201ENST00000494052 532 ntBASIC3.41□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 91.9 ms