Protein–RNA interactions for Protein: P78363

ABCA4, Retinal-specific ATP-binding cassette transporter, humanhuman

Predictions only

Length 2,273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4P78363 AC055876.1-202ENST00000567053 138 ntBASIC2.19□□□□□ -2.06
ABCA4P78363 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
ABCA4P78363 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.19□□□□□ -2.06
ABCA4P78363 DCAF13P3-201ENST00000561147 1334 ntBASIC2.19□□□□□ -2.06
ABCA4P78363 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC2.19□□□□□ -2.06
ABCA4P78363 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC2.19□□□□□ -2.06
ABCA4P78363 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
ABCA4P78363 AC091152.2-201ENST00000591628 2569 ntBASIC2.19□□□□□ -2.06
ABCA4P78363 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
ABCA4P78363 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
ABCA4P78363 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC2.19□□□□□ -2.06
ABCA4P78363 PRELID3BP11-201ENST00000414230 479 ntBASIC2.19□□□□□ -2.06
ABCA4P78363 AC093084.1-201ENST00000424233 687 ntBASIC2.19□□□□□ -2.06
ABCA4P78363 NANOGP5-201ENST00000424456 877 ntBASIC2.19□□□□□ -2.06
ABCA4P78363 AL590103.1-201ENST00000434488 307 ntBASIC2.19□□□□□ -2.06
ABCA4P78363 USP9YP7-201ENST00000436723 430 ntBASIC2.19□□□□□ -2.06
ABCA4P78363 AC009969.1-201ENST00000438726 172 ntBASIC2.19□□□□□ -2.06
ABCA4P78363 AC000111.1-201ENST00000441019 221 ntTSL 3 BASIC2.19□□□□□ -2.06
ABCA4P78363 USP9YP32-201ENST00000452432 430 ntBASIC2.19□□□□□ -2.06
ABCA4P78363 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC2.19□□□□□ -2.06
ABCA4P78363 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC2.19□□□□□ -2.06
ABCA4P78363 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC2.19□□□□□ -2.06
ABCA4P78363 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
ABCA4P78363 PTP4A1P6-201ENST00000531034 478 ntBASIC2.19□□□□□ -2.06
ABCA4P78363 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC2.19□□□□□ -2.06
ABCA4P78363 FAM106CP-201ENST00000582212 507 ntBASIC2.19□□□□□ -2.06
ABCA4P78363 AC022069.1-201ENST00000582910 658 ntBASIC2.19□□□□□ -2.06
ABCA4P78363 MIR4635-201ENST00000583759 79 ntBASIC2.19□□□□□ -2.06
ABCA4P78363 AL450489.1-201ENST00000612071 468 ntBASIC2.19□□□□□ -2.06
ABCA4P78363 AC099063.3-201ENST00000642066 185 ntBASIC2.19□□□□□ -2.06
ABCA4P78363 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC2.18□□□□□ -2.06
ABCA4P78363 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC2.18□□□□□ -2.06
ABCA4P78363 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC2.18□□□□□ -2.06
ABCA4P78363 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.18□□□□□ -2.06
ABCA4P78363 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.18□□□□□ -2.06
ABCA4P78363 SNORA31-201ENST00000362607 130 ntBASIC2.18□□□□□ -2.06
ABCA4P78363 RPL31P45-201ENST00000419532 356 ntBASIC2.18□□□□□ -2.06
ABCA4P78363 OR2B8P-201ENST00000432841 938 ntBASIC2.18□□□□□ -2.06
ABCA4P78363 VDAC1P3-201ENST00000434069 851 ntBASIC2.18□□□□□ -2.06
ABCA4P78363 GAPDHP27-201ENST00000447427 1020 ntBASIC2.18□□□□□ -2.06
ABCA4P78363 HMGN1P5-201ENST00000448591 263 ntBASIC2.18□□□□□ -2.06
ABCA4P78363 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC2.18□□□□□ -2.06
ABCA4P78363 NDUFB4P9-201ENST00000511646 388 ntBASIC2.18□□□□□ -2.06
ABCA4P78363 C5orf46-203ENST00000515291 573 ntAPPRIS ALT1 TSL 1 (best) BASIC2.18□□□□□ -2.06
ABCA4P78363 RNA5SP309-201ENST00000516670 106 ntBASIC2.18□□□□□ -2.06
ABCA4P78363 HIGD1AP10-201ENST00000527837 282 ntBASIC2.18□□□□□ -2.06
ABCA4P78363 AL355836.1-201ENST00000555951 870 ntBASIC2.18□□□□□ -2.06
ABCA4P78363 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC2.18□□□□□ -2.06
ABCA4P78363 NTAN1P1-201ENST00000603150 646 ntBASIC2.18□□□□□ -2.06
ABCA4P78363 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC2.18□□□□□ -2.06
ABCA4P78363 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC2.18□□□□□ -2.06
ABCA4P78363 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC2.18□□□□□ -2.06
ABCA4P78363 HSPA8P4-201ENST00000511877 1920 ntBASIC2.18□□□□□ -2.06
ABCA4P78363 ZNF33CP-201ENST00000432492 2030 ntBASIC2.18□□□□□ -2.06
ABCA4P78363 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
ABCA4P78363 RNA5SP295-201ENST00000362655 121 ntBASIC2.17□□□□□ -2.06
ABCA4P78363 RNU6-328P-201ENST00000390887 106 ntBASIC2.17□□□□□ -2.06
ABCA4P78363 EIF5P1-201ENST00000400019 1231 ntBASIC2.17□□□□□ -2.06
ABCA4P78363 ATF1P1-201ENST00000406040 927 ntBASIC2.17□□□□□ -2.06
ABCA4P78363 RPL31P52-201ENST00000407532 367 ntBASIC2.17□□□□□ -2.06
ABCA4P78363 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
ABCA4P78363 HNRNPDLP3-201ENST00000456745 380 ntBASIC2.17□□□□□ -2.06
ABCA4P78363 AC093278.1-201ENST00000494700 600 ntBASIC2.17□□□□□ -2.06
ABCA4P78363 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC2.17□□□□□ -2.06
ABCA4P78363 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC2.17□□□□□ -2.06
ABCA4P78363 AL355432.1-201ENST00000522960 564 ntTSL 3 BASIC2.17□□□□□ -2.06
ABCA4P78363 AC061975.8-201ENST00000587058 721 ntBASIC2.17□□□□□ -2.06
ABCA4P78363 AC008277.2-201ENST00000605196 797 ntBASIC2.17□□□□□ -2.06
ABCA4P78363 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC2.17□□□□□ -2.06
ABCA4P78363 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC2.17□□□□□ -2.06
ABCA4P78363 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC2.17□□□□□ -2.06
ABCA4P78363 TAS2R20-201ENST00000538986 1381 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
ABCA4P78363 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
ABCA4P78363 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
ABCA4P78363 AP001148.1-201ENST00000624124 2359 ntBASIC2.17□□□□□ -2.06
ABCA4P78363 OR5M3-201ENST00000312240 1051 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
ABCA4P78363 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC2.17□□□□□ -2.06
ABCA4P78363 RNA5SP99-201ENST00000364020 114 ntBASIC2.17□□□□□ -2.06
ABCA4P78363 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC2.17□□□□□ -2.06
ABCA4P78363 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC2.17□□□□□ -2.06
ABCA4P78363 Z99127.2-201ENST00000441426 334 ntBASIC2.17□□□□□ -2.06
ABCA4P78363 AL662791.1-201ENST00000441992 928 ntBASIC2.17□□□□□ -2.06
ABCA4P78363 OR4G11P-201ENST00000492842 939 ntBASIC2.17□□□□□ -2.06
ABCA4P78363 KCTD9P5-201ENST00000504141 1170 ntBASIC2.17□□□□□ -2.06
ABCA4P78363 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC2.17□□□□□ -2.06
ABCA4P78363 AC107222.1-201ENST00000510899 637 ntBASIC2.17□□□□□ -2.06
ABCA4P78363 USP9YP5-201ENST00000511770 630 ntBASIC2.17□□□□□ -2.06
ABCA4P78363 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC2.17□□□□□ -2.06
ABCA4P78363 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC2.17□□□□□ -2.06
ABCA4P78363 AP001317.1-201ENST00000531194 960 ntBASIC2.17□□□□□ -2.06
ABCA4P78363 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC2.17□□□□□ -2.06
ABCA4P78363 LINC02446-201ENST00000544591 868 ntTSL 2 BASIC2.17□□□□□ -2.06
ABCA4P78363 AC005046.1-201ENST00000608515 625 ntBASIC2.17□□□□□ -2.06
ABCA4P78363 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC2.17□□□□□ -2.06
ABCA4P78363 AP006248.2-201ENST00000623309 592 ntBASIC2.17□□□□□ -2.06
ABCA4P78363 AC145207.9-201ENST00000623802 325 ntBASIC2.17□□□□□ -2.06
ABCA4P78363 AL035425.3-201ENST00000564206 4996 ntBASIC2.17□□□□□ -2.06
ABCA4P78363 GABPAP-201ENST00000419271 1356 ntBASIC2.17□□□□□ -2.06
ABCA4P78363 SYT14P1-202ENST00000600441 1448 ntBASIC2.17□□□□□ -2.06
ABCA4P78363 OR4G2P-202ENST00000641004 1759 ntBASIC2.17□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 106.7 ms