Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC3.12□□□□□ -1.91
TPM4P67936 AL162400.1-201ENST00000418091 359 ntTSL 5 BASIC3.12□□□□□ -1.91
TPM4P67936 RPL36AP36-201ENST00000418616 301 ntBASIC3.12□□□□□ -1.91
TPM4P67936 UBE2D3P2-201ENST00000424409 445 ntBASIC3.12□□□□□ -1.91
TPM4P67936 USP9YP36-201ENST00000424581 829 ntBASIC3.12□□□□□ -1.91
TPM4P67936 DUTP6-201ENST00000425573 462 ntBASIC3.12□□□□□ -1.91
TPM4P67936 MRPL50P4-201ENST00000446432 475 ntBASIC3.12□□□□□ -1.91
TPM4P67936 NIPA2P5-201ENST00000452282 464 ntBASIC3.12□□□□□ -1.91
TPM4P67936 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC3.12□□□□□ -1.91
TPM4P67936 snoU13.4-201ENST00000458916 104 ntBASIC3.12□□□□□ -1.91
TPM4P67936 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
TPM4P67936 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
TPM4P67936 HSPD1P15-201ENST00000505573 1122 ntBASIC3.12□□□□□ -1.91
TPM4P67936 TBCAP3-201ENST00000512475 312 ntBASIC3.12□□□□□ -1.91
TPM4P67936 AC133963.2-201ENST00000513686 578 ntBASIC3.12□□□□□ -1.91
TPM4P67936 SCGB1D5P-201ENST00000515134 247 ntBASIC3.12□□□□□ -1.91
TPM4P67936 IGLVIV-66-1-201ENST00000521832 460 ntBASIC3.12□□□□□ -1.91
TPM4P67936 AC022690.1-201ENST00000526681 550 ntBASIC3.12□□□□□ -1.91
TPM4P67936 MAL2-203ENST00000534619 578 ntTSL 4 BASIC3.12□□□□□ -1.91
TPM4P67936 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC3.12□□□□□ -1.91
TPM4P67936 AL355836.1-201ENST00000555951 870 ntBASIC3.12□□□□□ -1.91
TPM4P67936 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
TPM4P67936 AC006130.2-201ENST00000586202 326 ntBASIC3.12□□□□□ -1.91
TPM4P67936 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC3.12□□□□□ -1.91
TPM4P67936 AL356575.1-201ENST00000603008 283 ntBASIC3.12□□□□□ -1.91
TPM4P67936 MTCO3P22-201ENST00000603219 784 ntBASIC3.12□□□□□ -1.91
TPM4P67936 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC3.12□□□□□ -1.91
TPM4P67936 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC3.12□□□□□ -1.91
TPM4P67936 CR381653.2-201ENST00000624041 768 ntBASIC3.12□□□□□ -1.91
TPM4P67936 AC079228.1-201ENST00000624774 1049 ntBASIC3.12□□□□□ -1.91
TPM4P67936 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC3.12□□□□□ -1.91
TPM4P67936 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
TPM4P67936 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC3.12□□□□□ -1.91
TPM4P67936 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
TPM4P67936 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC3.11□□□□□ -1.91
TPM4P67936 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC3.11□□□□□ -1.91
TPM4P67936 RNU6-263P-201ENST00000363811 107 ntBASIC3.11□□□□□ -1.91
TPM4P67936 RNU6-374P-201ENST00000364146 108 ntBASIC3.11□□□□□ -1.91
TPM4P67936 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
TPM4P67936 RPL21P75-201ENST00000396599 483 ntBASIC3.11□□□□□ -1.91
TPM4P67936 RPL21P28-201ENST00000401418 483 ntBASIC3.11□□□□□ -1.91
TPM4P67936 AL592114.1-201ENST00000403842 483 ntBASIC3.11□□□□□ -1.91
TPM4P67936 AC007403.1-201ENST00000427579 567 ntTSL 4 BASIC3.11□□□□□ -1.91
TPM4P67936 AC005300.1-201ENST00000428401 373 ntBASIC3.11□□□□□ -1.91
TPM4P67936 AC005326.1-201ENST00000429197 123 ntBASIC3.11□□□□□ -1.91
TPM4P67936 UBE2V1P6-201ENST00000430840 422 ntBASIC3.11□□□□□ -1.91
TPM4P67936 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC3.11□□□□□ -1.91
TPM4P67936 RPL21P39-201ENST00000463605 483 ntBASIC3.11□□□□□ -1.91
TPM4P67936 AC011979.1-201ENST00000472300 483 ntBASIC3.11□□□□□ -1.91
TPM4P67936 RPL21P93-201ENST00000480465 489 ntBASIC3.11□□□□□ -1.91
TPM4P67936 AC233702.1-201ENST00000482905 502 ntBASIC3.11□□□□□ -1.91
TPM4P67936 AC093591.1-201ENST00000491435 481 ntBASIC3.11□□□□□ -1.91
TPM4P67936 RPL21P129-201ENST00000491732 478 ntBASIC3.11□□□□□ -1.91
TPM4P67936 RPL21P16-201ENST00000495531 483 ntBASIC3.11□□□□□ -1.91
TPM4P67936 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC3.11□□□□□ -1.91
TPM4P67936 AC111000.2-201ENST00000507775 550 ntBASIC3.11□□□□□ -1.91
TPM4P67936 AC004062.1-201ENST00000509926 645 ntBASIC3.11□□□□□ -1.91
TPM4P67936 AC026412.2-201ENST00000512270 1075 ntBASIC3.11□□□□□ -1.91
TPM4P67936 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC3.11□□□□□ -1.91
TPM4P67936 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC3.11□□□□□ -1.91
TPM4P67936 AC008885.1-201ENST00000514930 301 ntBASIC3.11□□□□□ -1.91
TPM4P67936 AC104997.1-201ENST00000519761 717 ntBASIC3.11□□□□□ -1.91
TPM4P67936 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC3.11□□□□□ -1.91
TPM4P67936 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC3.11□□□□□ -1.91
TPM4P67936 SMILR-201ENST00000533992 553 ntTSL 4 BASIC3.11□□□□□ -1.91
TPM4P67936 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC3.11□□□□□ -1.91
TPM4P67936 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC3.11□□□□□ -1.91
TPM4P67936 CR383656.14-201ENST00000551951 406 ntBASIC3.11□□□□□ -1.91
TPM4P67936 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC3.11□□□□□ -1.91
TPM4P67936 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC3.11□□□□□ -1.91
TPM4P67936 AC008277.2-201ENST00000605196 797 ntBASIC3.11□□□□□ -1.91
TPM4P67936 AC018755.4-201ENST00000619715 454 ntBASIC3.11□□□□□ -1.91
TPM4P67936 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
TPM4P67936 AC000403.1-201ENST00000613696 3585 ntBASIC3.1□□□□□ -1.91
TPM4P67936 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
TPM4P67936 CD24P4-201ENST00000382840 243 ntBASIC3.1□□□□□ -1.91
TPM4P67936 RNU6-152P-201ENST00000384037 107 ntBASIC3.1□□□□□ -1.91
TPM4P67936 DSTNP4-201ENST00000399472 474 ntBASIC3.1□□□□□ -1.91
TPM4P67936 RNA5SP56-201ENST00000410277 118 ntBASIC3.1□□□□□ -1.91
TPM4P67936 OFD1P18Y-201ENST00000420889 959 ntBASIC3.1□□□□□ -1.91
TPM4P67936 AL513175.2-201ENST00000422071 443 ntBASIC3.1□□□□□ -1.91
TPM4P67936 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC3.1□□□□□ -1.91
TPM4P67936 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC3.1□□□□□ -1.91
TPM4P67936 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC3.1□□□□□ -1.91
TPM4P67936 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC3.1□□□□□ -1.91
TPM4P67936 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC3.1□□□□□ -1.91
TPM4P67936 AC027673.1-201ENST00000456245 405 ntBASIC3.1□□□□□ -1.91
TPM4P67936 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC3.1□□□□□ -1.91
TPM4P67936 AC117522.3-201ENST00000507974 584 ntBASIC3.1□□□□□ -1.91
TPM4P67936 MTCYBP37-201ENST00000510642 1133 ntBASIC3.1□□□□□ -1.91
TPM4P67936 AC009812.2-201ENST00000517657 457 ntBASIC3.1□□□□□ -1.91
TPM4P67936 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC3.1□□□□□ -1.91
TPM4P67936 RGS4-209ENST00000531057 544 ntTSL 4 BASIC3.1□□□□□ -1.91
TPM4P67936 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC3.1□□□□□ -1.91
TPM4P67936 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC3.1□□□□□ -1.91
TPM4P67936 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC3.1□□□□□ -1.91
TPM4P67936 AC073111.2-201ENST00000605657 1075 ntBASIC3.1□□□□□ -1.91
TPM4P67936 BX664608.1-201ENST00000610519 487 ntBASIC3.1□□□□□ -1.91
TPM4P67936 AP003122.6-201ENST00000623831 495 ntBASIC3.1□□□□□ -1.91
TPM4P67936 LINC00836-203ENST00000628620 1179 ntTSL 5 BASIC3.1□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 108 ms