Protein–RNA interactions for Protein: P55318

FOXA3, Hepatocyte nuclear factor 3-gamma, humanhuman

Predicted RBP Predictions only

Length 350 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA3P55318 AC103798.2-201ENST00000624292 632 ntBASIC2.08□□□□□ -2.08
FOXA3P55318 MIR3651-201ENST00000630427 90 ntBASIC2.08□□□□□ -2.08
FOXA3P55318 LINC02030-201ENST00000492683 1602 ntTSL 5 BASIC2.08□□□□□ -2.08
FOXA3P55318 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.08□□□□□ -2.08
FOXA3P55318 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.08□□□□□ -2.08
FOXA3P55318 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC2.08□□□□□ -2.08
FOXA3P55318 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
FOXA3P55318 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC2.07□□□□□ -2.08
FOXA3P55318 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC2.07□□□□□ -2.08
FOXA3P55318 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC2.07□□□□□ -2.08
FOXA3P55318 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.07□□□□□ -2.08
FOXA3P55318 AL672167.1-206ENST00000356293 943 ntBASIC2.07□□□□□ -2.08
FOXA3P55318 RNA5SP393-201ENST00000363423 117 ntBASIC2.07□□□□□ -2.08
FOXA3P55318 RNU1-100P-201ENST00000365255 165 ntBASIC2.07□□□□□ -2.08
FOXA3P55318 MIR142-201ENST00000384835 87 ntBASIC2.07□□□□□ -2.08
FOXA3P55318 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
FOXA3P55318 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
FOXA3P55318 AGR3-202ENST00000402239 563 ntTSL 2 BASIC2.07□□□□□ -2.08
FOXA3P55318 SFR1P1-201ENST00000403720 688 ntBASIC2.07□□□□□ -2.08
FOXA3P55318 MIR1193-201ENST00000408109 78 ntBASIC2.07□□□□□ -2.08
FOXA3P55318 Y_RNA.625-201ENST00000411256 107 ntBASIC2.07□□□□□ -2.08
FOXA3P55318 RAB28P1-201ENST00000411517 641 ntBASIC2.07□□□□□ -2.08
FOXA3P55318 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC2.07□□□□□ -2.08
FOXA3P55318 RPL21P32-201ENST00000419877 477 ntBASIC2.07□□□□□ -2.08
FOXA3P55318 AL606495.1-201ENST00000422100 813 ntBASIC2.07□□□□□ -2.08
FOXA3P55318 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC2.07□□□□□ -2.08
FOXA3P55318 AC127537.2-201ENST00000439258 465 ntBASIC2.07□□□□□ -2.08
FOXA3P55318 AL133547.1-201ENST00000448546 220 ntBASIC2.07□□□□□ -2.08
FOXA3P55318 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC2.07□□□□□ -2.08
FOXA3P55318 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
FOXA3P55318 RPS4XP10-201ENST00000465034 731 ntBASIC2.07□□□□□ -2.08
FOXA3P55318 PRELID3BP5-201ENST00000508612 460 ntBASIC2.07□□□□□ -2.08
FOXA3P55318 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC2.07□□□□□ -2.08
FOXA3P55318 AC025881.1-201ENST00000518851 512 ntBASIC2.07□□□□□ -2.08
FOXA3P55318 AC026403.1-201ENST00000518938 295 ntBASIC2.07□□□□□ -2.08
FOXA3P55318 COX6B1P6-201ENST00000522347 255 ntBASIC2.07□□□□□ -2.08
FOXA3P55318 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC2.07□□□□□ -2.08
FOXA3P55318 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC2.07□□□□□ -2.08
FOXA3P55318 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC2.07□□□□□ -2.08
FOXA3P55318 AC012409.1-202ENST00000558449 639 ntTSL 2 BASIC2.07□□□□□ -2.08
FOXA3P55318 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC2.07□□□□□ -2.08
FOXA3P55318 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC2.07□□□□□ -2.08
FOXA3P55318 MIR4446-201ENST00000578505 67 ntBASIC2.07□□□□□ -2.08
FOXA3P55318 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC2.07□□□□□ -2.08
FOXA3P55318 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC2.07□□□□□ -2.08
FOXA3P55318 AC103881.1-201ENST00000603476 538 ntBASIC2.07□□□□□ -2.08
FOXA3P55318 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC2.07□□□□□ -2.08
FOXA3P55318 AL162274.2-201ENST00000614406 332 ntBASIC2.07□□□□□ -2.08
FOXA3P55318 AP004607.9-201ENST00000618202 316 ntBASIC2.07□□□□□ -2.08
FOXA3P55318 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC2.07□□□□□ -2.08
FOXA3P55318 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
FOXA3P55318 AC016717.3-201ENST00000624730 554 ntBASIC2.07□□□□□ -2.08
FOXA3P55318 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
FOXA3P55318 AL645568.2-201ENST00000432815 1337 ntBASIC2.07□□□□□ -2.08
FOXA3P55318 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
FOXA3P55318 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC2.07□□□□□ -2.08
FOXA3P55318 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
FOXA3P55318 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
FOXA3P55318 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.06□□□□□ -2.08
FOXA3P55318 MIR554-201ENST00000384874 96 ntBASIC2.06□□□□□ -2.08
FOXA3P55318 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
FOXA3P55318 SNX10-203ENST00000409367 746 ntTSL 5 BASIC2.06□□□□□ -2.08
FOXA3P55318 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC2.06□□□□□ -2.08
FOXA3P55318 AL513477.1-202ENST00000417061 214 ntBASIC2.06□□□□□ -2.08
FOXA3P55318 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
FOXA3P55318 UBE2D3P2-201ENST00000424409 445 ntBASIC2.06□□□□□ -2.08
FOXA3P55318 AC007403.1-201ENST00000427579 567 ntTSL 4 BASIC2.06□□□□□ -2.08
FOXA3P55318 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC2.06□□□□□ -2.08
FOXA3P55318 AC018644.1-201ENST00000429934 551 ntBASIC2.06□□□□□ -2.08
FOXA3P55318 RPL37P1-201ENST00000432310 284 ntBASIC2.06□□□□□ -2.08
FOXA3P55318 AC091390.1-201ENST00000433904 331 ntBASIC2.06□□□□□ -2.08
FOXA3P55318 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC2.06□□□□□ -2.08
FOXA3P55318 AC024084.1-201ENST00000440744 455 ntTSL 5 BASIC2.06□□□□□ -2.08
FOXA3P55318 AC009961.3-201ENST00000449832 765 ntBASIC2.06□□□□□ -2.08
FOXA3P55318 RPL27AP5-201ENST00000469428 449 ntBASIC2.06□□□□□ -2.08
FOXA3P55318 AC126182.1-201ENST00000478134 357 ntBASIC2.06□□□□□ -2.08
FOXA3P55318 AC126121.1-201ENST00000482313 553 ntBASIC2.06□□□□□ -2.08
FOXA3P55318 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC2.06□□□□□ -2.08
FOXA3P55318 SRIP1-201ENST00000489235 288 ntBASIC2.06□□□□□ -2.08
FOXA3P55318 ACTR3BP4-201ENST00000503033 1244 ntBASIC2.06□□□□□ -2.08
FOXA3P55318 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC2.06□□□□□ -2.08
FOXA3P55318 UCHL1-AS1-201ENST00000507190 592 ntTSL 4 BASIC2.06□□□□□ -2.08
FOXA3P55318 AC010625.1-201ENST00000511296 403 ntBASIC2.06□□□□□ -2.08
FOXA3P55318 RNU1-45P-201ENST00000517191 141 ntBASIC2.06□□□□□ -2.08
FOXA3P55318 RN7SKP40-201ENST00000517211 242 ntBASIC2.06□□□□□ -2.08
FOXA3P55318 AC004923.2-201ENST00000529649 369 ntBASIC2.06□□□□□ -2.08
FOXA3P55318 AHI1-217ENST00000534469 680 ntTSL 3 BASIC2.06□□□□□ -2.08
FOXA3P55318 AC036103.1-201ENST00000563846 823 ntTSL 5 BASIC2.06□□□□□ -2.08
FOXA3P55318 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC2.06□□□□□ -2.08
FOXA3P55318 ZNF861P-201ENST00000588126 639 ntBASIC2.06□□□□□ -2.08
FOXA3P55318 NUTF2P8-201ENST00000604593 363 ntBASIC2.06□□□□□ -2.08
FOXA3P55318 AC008277.2-201ENST00000605196 797 ntBASIC2.06□□□□□ -2.08
FOXA3P55318 BX323046.1-201ENST00000610145 535 ntBASIC2.06□□□□□ -2.08
FOXA3P55318 AC039056.2-201ENST00000622261 511 ntBASIC2.06□□□□□ -2.08
FOXA3P55318 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC2.06□□□□□ -2.08
FOXA3P55318 TEX41-300ENST00000631048 69 ntTSL 5 BASIC2.06□□□□□ -2.08
FOXA3P55318 AC012442.3-202ENST00000636742 206 ntBASIC2.06□□□□□ -2.08
FOXA3P55318 IL33-203ENST00000456383 2501 ntTSL 5 BASIC2.06□□□□□ -2.08
FOXA3P55318 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC2.05□□□□□ -2.08
FOXA3P55318 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC2.05□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 92.6 ms