Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 MTND4LP18-201ENST00000526864 291 ntBASIC3.9□□□□□ -1.79
CDH12P55289 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC3.9□□□□□ -1.79
CDH12P55289 AC063950.1-201ENST00000552036 308 ntBASIC3.9□□□□□ -1.79
CDH12P55289 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC3.9□□□□□ -1.79
CDH12P55289 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC3.9□□□□□ -1.79
CDH12P55289 RPL23AP92-201ENST00000603609 255 ntBASIC3.9□□□□□ -1.79
CDH12P55289 AL390208.1-201ENST00000605885 644 ntBASIC3.9□□□□□ -1.79
CDH12P55289 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC3.9□□□□□ -1.79
CDH12P55289 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC3.9□□□□□ -1.79
CDH12P55289 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC3.9□□□□□ -1.79
CDH12P55289 AC008498.1-201ENST00000613012 531 ntBASIC3.9□□□□□ -1.79
CDH12P55289 AC004009.2-201ENST00000623016 728 ntBASIC3.9□□□□□ -1.79
CDH12P55289 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC3.9□□□□□ -1.79
CDH12P55289 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC3.9□□□□□ -1.79
CDH12P55289 AC008013.2-202ENST00000637965 364 ntBASIC3.9□□□□□ -1.79
CDH12P55289 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
CDH12P55289 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
CDH12P55289 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC3.9□□□□□ -1.79
CDH12P55289 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
CDH12P55289 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC3.9□□□□□ -1.79
CDH12P55289 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
CDH12P55289 AC010300.1-201ENST00000600671 5134 ntBASIC3.89□□□□□ -1.79
CDH12P55289 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
CDH12P55289 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC3.89□□□□□ -1.79
CDH12P55289 RNA5SP505-201ENST00000364748 108 ntBASIC3.89□□□□□ -1.79
CDH12P55289 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
CDH12P55289 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
CDH12P55289 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC3.89□□□□□ -1.79
CDH12P55289 RNU6-1215P-201ENST00000384441 102 ntBASIC3.89□□□□□ -1.79
CDH12P55289 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
CDH12P55289 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
CDH12P55289 OR6C69P-201ENST00000394268 893 ntBASIC3.89□□□□□ -1.79
CDH12P55289 SLC9B1P2-201ENST00000398120 1184 ntBASIC3.89□□□□□ -1.79
CDH12P55289 SNORA3C-201ENST00000408792 125 ntBASIC3.89□□□□□ -1.79
CDH12P55289 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC3.89□□□□□ -1.79
CDH12P55289 RNU6-248P-201ENST00000410720 107 ntBASIC3.89□□□□□ -1.79
CDH12P55289 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC3.89□□□□□ -1.79
CDH12P55289 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC3.89□□□□□ -1.79
CDH12P55289 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC3.89□□□□□ -1.79
CDH12P55289 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC3.89□□□□□ -1.79
CDH12P55289 AC104651.1-201ENST00000427559 735 ntBASIC3.89□□□□□ -1.79
CDH12P55289 AL590233.1-201ENST00000430017 456 ntBASIC3.89□□□□□ -1.79
CDH12P55289 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC3.89□□□□□ -1.79
CDH12P55289 AC011998.1-201ENST00000433403 117 ntBASIC3.89□□□□□ -1.79
CDH12P55289 LYPLA1P1-201ENST00000434514 622 ntBASIC3.89□□□□□ -1.79
CDH12P55289 AL356276.2-201ENST00000435919 558 ntBASIC3.89□□□□□ -1.79
CDH12P55289 AC127537.2-201ENST00000439258 465 ntBASIC3.89□□□□□ -1.79
CDH12P55289 AL512326.1-201ENST00000443050 721 ntBASIC3.89□□□□□ -1.79
CDH12P55289 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC3.89□□□□□ -1.79
CDH12P55289 RPL7P36-201ENST00000444633 681 ntBASIC3.89□□□□□ -1.79
CDH12P55289 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC3.89□□□□□ -1.79
CDH12P55289 PHBP16-201ENST00000446318 950 ntBASIC3.89□□□□□ -1.79
CDH12P55289 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC3.89□□□□□ -1.79
CDH12P55289 MTCO1P42-201ENST00000457379 726 ntBASIC3.89□□□□□ -1.79
CDH12P55289 CREM-226ENST00000469949 721 ntTSL 3 BASIC3.89□□□□□ -1.79
CDH12P55289 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC3.89□□□□□ -1.79
CDH12P55289 RPS29P19-201ENST00000479709 171 ntBASIC3.89□□□□□ -1.79
CDH12P55289 AK3P4-201ENST00000504283 583 ntBASIC3.89□□□□□ -1.79
CDH12P55289 RPL37P25-201ENST00000507308 276 ntBASIC3.89□□□□□ -1.79
CDH12P55289 AL117351.2-201ENST00000513571 157 ntBASIC3.89□□□□□ -1.79
CDH12P55289 RNU4ATAC10P-201ENST00000516967 122 ntBASIC3.89□□□□□ -1.79
CDH12P55289 PAICSP4-201ENST00000517543 1253 ntBASIC3.89□□□□□ -1.79
CDH12P55289 TRAPPC2P2-201ENST00000517589 409 ntBASIC3.89□□□□□ -1.79
CDH12P55289 MTND1P5-201ENST00000517906 940 ntBASIC3.89□□□□□ -1.79
CDH12P55289 DUXAP2-201ENST00000519198 589 ntBASIC3.89□□□□□ -1.79
CDH12P55289 AP003392.2-201ENST00000527269 208 ntBASIC3.89□□□□□ -1.79
CDH12P55289 AP002453.2-201ENST00000533503 320 ntBASIC3.89□□□□□ -1.79
CDH12P55289 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC3.89□□□□□ -1.79
CDH12P55289 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC3.89□□□□□ -1.79
CDH12P55289 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC3.89□□□□□ -1.79
CDH12P55289 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC3.89□□□□□ -1.79
CDH12P55289 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC3.89□□□□□ -1.79
CDH12P55289 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC3.89□□□□□ -1.79
CDH12P55289 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC3.89□□□□□ -1.79
CDH12P55289 TTN-AS1-232ENST00000589487 1077 ntTSL 5 BASIC3.89□□□□□ -1.79
CDH12P55289 AL589743.7-201ENST00000612637 233 ntBASIC3.89□□□□□ -1.79
CDH12P55289 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC3.89□□□□□ -1.79
CDH12P55289 AC103858.2-201ENST00000621471 543 ntBASIC3.89□□□□□ -1.79
CDH12P55289 AC140479.6-201ENST00000633535 357 ntBASIC3.89□□□□□ -1.79
CDH12P55289 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
CDH12P55289 DCAF13P1-201ENST00000495256 1330 ntBASIC3.89□□□□□ -1.79
CDH12P55289 AC018555.1-201ENST00000567548 1980 ntBASIC3.89□□□□□ -1.79
CDH12P55289 AC092447.7-201ENST00000422212 1621 ntBASIC3.88□□□□□ -1.79
CDH12P55289 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC3.88□□□□□ -1.79
CDH12P55289 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC3.88□□□□□ -1.79
CDH12P55289 THUMPD3P1-201ENST00000506556 1480 ntBASIC3.88□□□□□ -1.79
CDH12P55289 MFSD8-216ENST00000641147 4009 ntBASIC3.88□□□□□ -1.79
CDH12P55289 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC3.88□□□□□ -1.79
CDH12P55289 RNU6-744P-201ENST00000365557 107 ntBASIC3.88□□□□□ -1.79
CDH12P55289 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC3.88□□□□□ -1.79
CDH12P55289 RNU6-533P-201ENST00000384144 107 ntBASIC3.88□□□□□ -1.79
CDH12P55289 RNU6-1316P-201ENST00000384242 108 ntBASIC3.88□□□□□ -1.79
CDH12P55289 Y_RNA.516-201ENST00000384541 124 ntBASIC3.88□□□□□ -1.79
CDH12P55289 SNORA40.3-201ENST00000390964 122 ntBASIC3.88□□□□□ -1.79
CDH12P55289 MTCO1P17-201ENST00000411522 491 ntBASIC3.88□□□□□ -1.79
CDH12P55289 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC3.88□□□□□ -1.79
CDH12P55289 AC119751.6-201ENST00000416712 186 ntBASIC3.88□□□□□ -1.79
CDH12P55289 RPL36AP36-201ENST00000418616 301 ntBASIC3.88□□□□□ -1.79
CDH12P55289 RPL31P45-201ENST00000419532 356 ntBASIC3.88□□□□□ -1.79
CDH12P55289 AC012065.2-201ENST00000421295 375 ntBASIC3.88□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 103.7 ms