Protein–RNA interactions for Protein: P53667

LIMK1, LIM domain kinase 1, humanhuman

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1P53667 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC3.89□□□□□ -1.79
LIMK1P53667 PCF11-AS1-201ENST00000602322 1516 ntBASIC3.89□□□□□ -1.79
LIMK1P53667 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
LIMK1P53667 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
LIMK1P53667 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
LIMK1P53667 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC3.88□□□□□ -1.79
LIMK1P53667 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC3.88□□□□□ -1.79
LIMK1P53667 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
LIMK1P53667 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
LIMK1P53667 CDR1-202ENST00000625883 1485 ntBASIC3.88□□□□□ -1.79
LIMK1P53667 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
LIMK1P53667 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC3.88□□□□□ -1.79
LIMK1P53667 RNU6-50P-201ENST00000362356 103 ntBASIC3.88□□□□□ -1.79
LIMK1P53667 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
LIMK1P53667 SNORA51.6-201ENST00000384151 125 ntBASIC3.88□□□□□ -1.79
LIMK1P53667 Y_RNA.493-201ENST00000384422 102 ntBASIC3.88□□□□□ -1.79
LIMK1P53667 RNU1-89P-201ENST00000384592 164 ntBASIC3.88□□□□□ -1.79
LIMK1P53667 TAF9BP1-201ENST00000396646 746 ntBASIC3.88□□□□□ -1.79
LIMK1P53667 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.88□□□□□ -1.79
LIMK1P53667 SNORA3C-201ENST00000408792 125 ntBASIC3.88□□□□□ -1.79
LIMK1P53667 RNA5SP129-201ENST00000410276 118 ntBASIC3.88□□□□□ -1.79
LIMK1P53667 RNU4-78P-201ENST00000410940 126 ntBASIC3.88□□□□□ -1.79
LIMK1P53667 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC3.88□□□□□ -1.79
LIMK1P53667 AL592310.1-201ENST00000414330 671 ntBASIC3.88□□□□□ -1.79
LIMK1P53667 TOMM22P1-201ENST00000418578 312 ntBASIC3.88□□□□□ -1.79
LIMK1P53667 Z97055.1-201ENST00000419730 712 ntBASIC3.88□□□□□ -1.79
LIMK1P53667 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC3.88□□□□□ -1.79
LIMK1P53667 AL590103.1-201ENST00000434488 307 ntBASIC3.88□□□□□ -1.79
LIMK1P53667 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC3.88□□□□□ -1.79
LIMK1P53667 Z80107.1-201ENST00000436830 412 ntBASIC3.88□□□□□ -1.79
LIMK1P53667 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC3.88□□□□□ -1.79
LIMK1P53667 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC3.88□□□□□ -1.79
LIMK1P53667 RPS24P6-201ENST00000452670 400 ntBASIC3.88□□□□□ -1.79
LIMK1P53667 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
LIMK1P53667 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC3.88□□□□□ -1.79
LIMK1P53667 AC093767.1-201ENST00000504523 156 ntBASIC3.88□□□□□ -1.79
LIMK1P53667 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
LIMK1P53667 RNU4ATAC10P-201ENST00000516967 122 ntBASIC3.88□□□□□ -1.79
LIMK1P53667 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC3.88□□□□□ -1.79
LIMK1P53667 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC3.88□□□□□ -1.79
LIMK1P53667 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC3.88□□□□□ -1.79
LIMK1P53667 MIR5187-201ENST00000583479 76 ntBASIC3.88□□□□□ -1.79
LIMK1P53667 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC3.88□□□□□ -1.79
LIMK1P53667 AC103881.1-201ENST00000603476 538 ntBASIC3.88□□□□□ -1.79
LIMK1P53667 AC023158.2-201ENST00000614876 543 ntBASIC3.88□□□□□ -1.79
LIMK1P53667 AC008083.4-201ENST00000615076 444 ntBASIC3.88□□□□□ -1.79
LIMK1P53667 AC023510.2-201ENST00000622162 746 ntBASIC3.88□□□□□ -1.79
LIMK1P53667 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC3.88□□□□□ -1.79
LIMK1P53667 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC3.88□□□□□ -1.79
LIMK1P53667 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
LIMK1P53667 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
LIMK1P53667 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.88□□□□□ -1.79
LIMK1P53667 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
LIMK1P53667 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC3.88□□□□□ -1.79
LIMK1P53667 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC3.88□□□□□ -1.79
LIMK1P53667 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC3.88□□□□□ -1.79
LIMK1P53667 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
LIMK1P53667 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC3.87□□□□□ -1.79
LIMK1P53667 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
LIMK1P53667 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
LIMK1P53667 RNU4-92P-201ENST00000363783 136 ntBASIC3.87□□□□□ -1.79
LIMK1P53667 SNORD82-201ENST00000365530 70 ntBASIC3.87□□□□□ -1.79
LIMK1P53667 SNORD116.1-201ENST00000365628 92 ntBASIC3.87□□□□□ -1.79
LIMK1P53667 Y_RNA.500-201ENST00000384466 111 ntBASIC3.87□□□□□ -1.79
LIMK1P53667 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
LIMK1P53667 RNU6-1242P-201ENST00000391052 103 ntBASIC3.87□□□□□ -1.79
LIMK1P53667 LUZP4P1-201ENST00000415420 344 ntBASIC3.87□□□□□ -1.79
LIMK1P53667 AL161631.1-201ENST00000417933 486 ntBASIC3.87□□□□□ -1.79
LIMK1P53667 RPL21P109-201ENST00000422213 475 ntBASIC3.87□□□□□ -1.79
LIMK1P53667 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC3.87□□□□□ -1.79
LIMK1P53667 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC3.87□□□□□ -1.79
LIMK1P53667 NEK4P1-201ENST00000433383 879 ntBASIC3.87□□□□□ -1.79
LIMK1P53667 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC3.87□□□□□ -1.79
LIMK1P53667 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC3.87□□□□□ -1.79
LIMK1P53667 AL356535.1-201ENST00000440335 398 ntBASIC3.87□□□□□ -1.79
LIMK1P53667 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC3.87□□□□□ -1.79
LIMK1P53667 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC3.87□□□□□ -1.79
LIMK1P53667 MTCO2P25-201ENST00000447065 681 ntBASIC3.87□□□□□ -1.79
LIMK1P53667 AC004022.1-201ENST00000447766 1066 ntBASIC3.87□□□□□ -1.79
LIMK1P53667 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC3.87□□□□□ -1.79
LIMK1P53667 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC3.87□□□□□ -1.79
LIMK1P53667 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC3.87□□□□□ -1.79
LIMK1P53667 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC3.87□□□□□ -1.79
LIMK1P53667 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC3.87□□□□□ -1.79
LIMK1P53667 AC114322.1-201ENST00000506771 926 ntBASIC3.87□□□□□ -1.79
LIMK1P53667 AC026412.2-201ENST00000512270 1075 ntBASIC3.87□□□□□ -1.79
LIMK1P53667 RNA5SP179-201ENST00000517284 121 ntBASIC3.87□□□□□ -1.79
LIMK1P53667 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC3.87□□□□□ -1.79
LIMK1P53667 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC3.87□□□□□ -1.79
LIMK1P53667 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC3.87□□□□□ -1.79
LIMK1P53667 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.87□□□□□ -1.79
LIMK1P53667 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC3.87□□□□□ -1.79
LIMK1P53667 AGGF1P5-201ENST00000567900 919 ntBASIC3.87□□□□□ -1.79
LIMK1P53667 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC3.87□□□□□ -1.79
LIMK1P53667 MIR3922-201ENST00000585192 84 ntBASIC3.87□□□□□ -1.79
LIMK1P53667 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC3.87□□□□□ -1.79
LIMK1P53667 DUXAP3-201ENST00000603616 594 ntBASIC3.87□□□□□ -1.79
LIMK1P53667 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC3.87□□□□□ -1.79
LIMK1P53667 AC006386.1-201ENST00000619436 415 ntBASIC3.87□□□□□ -1.79
LIMK1P53667 AC004925.1-201ENST00000624256 2706 ntBASIC3.87□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 100.1 ms