Protein–RNA interactions for Protein: P52435

POLR2J, DNA-directed RNA polymerase II subunit RPB11-a, humanhuman

Known RBP Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2JP52435 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC2.29□□□□□ -2.04
POLR2JP52435 AC000041.1-201ENST00000439655 175 ntBASIC2.29□□□□□ -2.04
POLR2JP52435 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC2.29□□□□□ -2.04
POLR2JP52435 AC109992.2-201ENST00000460977 765 ntTSL 3 BASIC2.29□□□□□ -2.04
POLR2JP52435 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC2.29□□□□□ -2.04
POLR2JP52435 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC2.29□□□□□ -2.04
POLR2JP52435 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC2.29□□□□□ -2.04
POLR2JP52435 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC2.29□□□□□ -2.04
POLR2JP52435 HSPE1P20-201ENST00000538133 289 ntBASIC2.29□□□□□ -2.04
POLR2JP52435 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC2.29□□□□□ -2.04
POLR2JP52435 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC2.29□□□□□ -2.04
POLR2JP52435 AC078909.1-201ENST00000559509 464 ntTSL 2 BASIC2.29□□□□□ -2.04
POLR2JP52435 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC2.29□□□□□ -2.04
POLR2JP52435 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC2.29□□□□□ -2.04
POLR2JP52435 MIR3690-201ENST00000580266 75 ntBASIC2.29□□□□□ -2.04
POLR2JP52435 AC010620.2-201ENST00000600135 313 ntBASIC2.29□□□□□ -2.04
POLR2JP52435 DUXAP3-201ENST00000603616 594 ntBASIC2.29□□□□□ -2.04
POLR2JP52435 AC092608.2-201ENST00000624427 218 ntBASIC2.29□□□□□ -2.04
POLR2JP52435 AC116563.2-201ENST00000624751 535 ntBASIC2.29□□□□□ -2.04
POLR2JP52435 AL121594.5-201ENST00000631724 573 ntBASIC2.29□□□□□ -2.04
POLR2JP52435 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.29□□□□□ -2.04
POLR2JP52435 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC2.28□□□□□ -2.04
POLR2JP52435 AC104446.1-201ENST00000613728 1321 ntBASIC2.28□□□□□ -2.04
POLR2JP52435 RNASE6-201ENST00000304677 1061 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
POLR2JP52435 RPL21P132-201ENST00000331267 462 ntBASIC2.28□□□□□ -2.04
POLR2JP52435 C1orf146-201ENST00000370373 871 ntTSL 5 BASIC2.28□□□□□ -2.04
POLR2JP52435 MIR23B-201ENST00000384832 97 ntBASIC2.28□□□□□ -2.04
POLR2JP52435 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC2.28□□□□□ -2.04
POLR2JP52435 U3.37-201ENST00000408528 213 ntBASIC2.28□□□□□ -2.04
POLR2JP52435 RNA5SP492-201ENST00000411330 114 ntBASIC2.28□□□□□ -2.04
POLR2JP52435 AF274854.1-201ENST00000413236 615 ntBASIC2.28□□□□□ -2.04
POLR2JP52435 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC2.28□□□□□ -2.04
POLR2JP52435 AL031736.2-201ENST00000426573 787 ntBASIC2.28□□□□□ -2.04
POLR2JP52435 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.28□□□□□ -2.04
POLR2JP52435 AC129850.1-201ENST00000436203 508 ntBASIC2.28□□□□□ -2.04
POLR2JP52435 RPL36AP51-201ENST00000487216 318 ntBASIC2.28□□□□□ -2.04
POLR2JP52435 RPL30P11-201ENST00000495304 339 ntBASIC2.28□□□□□ -2.04
POLR2JP52435 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC2.28□□□□□ -2.04
POLR2JP52435 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC2.28□□□□□ -2.04
POLR2JP52435 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
POLR2JP52435 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC2.28□□□□□ -2.04
POLR2JP52435 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC2.28□□□□□ -2.04
POLR2JP52435 AC078814.3-201ENST00000553036 491 ntBASIC2.28□□□□□ -2.04
POLR2JP52435 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC2.28□□□□□ -2.04
POLR2JP52435 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC2.28□□□□□ -2.04
POLR2JP52435 VN1R90P-201ENST00000595717 726 ntBASIC2.28□□□□□ -2.04
POLR2JP52435 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC2.28□□□□□ -2.04
POLR2JP52435 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC2.28□□□□□ -2.04
POLR2JP52435 AP003072.5-201ENST00000623872 773 ntBASIC2.28□□□□□ -2.04
POLR2JP52435 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC2.28□□□□□ -2.04
POLR2JP52435 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC2.28□□□□□ -2.04
POLR2JP52435 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC2.28□□□□□ -2.04
POLR2JP52435 AC002546.1-201ENST00000588041 2504 ntBASIC2.28□□□□□ -2.04
POLR2JP52435 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.05
POLR2JP52435 HSP90AA4P-202ENST00000506915 2228 ntBASIC2.27□□□□□ -2.05
POLR2JP52435 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC2.27□□□□□ -2.05
POLR2JP52435 NME5-201ENST00000265191 1198 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
POLR2JP52435 OR5J1P-201ENST00000313544 939 ntBASIC2.27□□□□□ -2.05
POLR2JP52435 SNORD46.1-201ENST00000364139 104 ntBASIC2.27□□□□□ -2.05
POLR2JP52435 MIR34A-201ENST00000385130 110 ntBASIC2.27□□□□□ -2.05
POLR2JP52435 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
POLR2JP52435 AL359511.1-201ENST00000402970 211 ntBASIC2.27□□□□□ -2.05
POLR2JP52435 HMGN2P35-201ENST00000412164 270 ntBASIC2.27□□□□□ -2.05
POLR2JP52435 AC010745.4-201ENST00000420130 740 ntTSL 5 BASIC2.27□□□□□ -2.05
POLR2JP52435 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC2.27□□□□□ -2.05
POLR2JP52435 FCF1P1-201ENST00000432690 571 ntBASIC2.27□□□□□ -2.05
POLR2JP52435 AC107083.1-201ENST00000439643 279 ntBASIC2.27□□□□□ -2.05
POLR2JP52435 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC2.27□□□□□ -2.05
POLR2JP52435 AC021205.1-201ENST00000468797 348 ntBASIC2.27□□□□□ -2.05
POLR2JP52435 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.27□□□□□ -2.05
POLR2JP52435 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC2.27□□□□□ -2.05
POLR2JP52435 SETP12-201ENST00000514068 805 ntBASIC2.27□□□□□ -2.05
POLR2JP52435 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.27□□□□□ -2.05
POLR2JP52435 SNORA31.11-201ENST00000516528 139 ntBASIC2.27□□□□□ -2.05
POLR2JP52435 IGHVII-62-1-201ENST00000519283 235 ntBASIC2.27□□□□□ -2.05
POLR2JP52435 AC012613.1-201ENST00000522685 387 ntTSL 2 BASIC2.27□□□□□ -2.05
POLR2JP52435 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC2.27□□□□□ -2.05
POLR2JP52435 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC2.27□□□□□ -2.05
POLR2JP52435 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC2.27□□□□□ -2.05
POLR2JP52435 AC007336.1-201ENST00000576365 3828 ntBASIC2.27□□□□□ -2.05
POLR2JP52435 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC2.27□□□□□ -2.05
POLR2JP52435 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.27□□□□□ -2.05
POLR2JP52435 AL109653.1-201ENST00000603091 248 ntBASIC2.27□□□□□ -2.05
POLR2JP52435 AC084373.1-201ENST00000603311 235 ntBASIC2.27□□□□□ -2.05
POLR2JP52435 AC004925.1-201ENST00000624256 2706 ntBASIC2.27□□□□□ -2.05
POLR2JP52435 CNOT6LP1-201ENST00000559681 1462 ntBASIC2.26□□□□□ -2.05
POLR2JP52435 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC2.26□□□□□ -2.05
POLR2JP52435 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC2.26□□□□□ -2.05
POLR2JP52435 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC2.26□□□□□ -2.05
POLR2JP52435 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
POLR2JP52435 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
POLR2JP52435 RNU1-109P-201ENST00000383960 147 ntBASIC2.26□□□□□ -2.05
POLR2JP52435 RNU6ATAC16P-201ENST00000408591 138 ntBASIC2.26□□□□□ -2.05
POLR2JP52435 OFD1P11Y-201ENST00000418213 1177 ntBASIC2.26□□□□□ -2.05
POLR2JP52435 AC023128.2-201ENST00000420880 1223 ntBASIC2.26□□□□□ -2.05
POLR2JP52435 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
POLR2JP52435 ATP5F1P1-201ENST00000433775 569 ntBASIC2.26□□□□□ -2.05
POLR2JP52435 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC2.26□□□□□ -2.05
POLR2JP52435 RPL34P26-201ENST00000445636 354 ntBASIC2.26□□□□□ -2.05
POLR2JP52435 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC2.26□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 93.6 ms