Protein–RNA interactions for Protein: P48061

CXCL12, Stromal cell-derived factor 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12P48061 AC104653.1-202ENST00000446401 390 ntTSL 3 BASIC2.94□□□□□ -1.94
CXCL12P48061 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC2.94□□□□□ -1.94
CXCL12P48061 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC2.94□□□□□ -1.94
CXCL12P48061 APOA2-205ENST00000468465 421 ntTSL 2 BASIC2.94□□□□□ -1.94
CXCL12P48061 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.94□□□□□ -1.94
CXCL12P48061 PDCD10-216ENST00000492396 814 ntTSL 5 BASIC2.94□□□□□ -1.94
CXCL12P48061 RPL7L1P13-201ENST00000511702 739 ntBASIC2.94□□□□□ -1.94
CXCL12P48061 AC034159.1-201ENST00000513885 583 ntBASIC2.94□□□□□ -1.94
CXCL12P48061 AC008494.2-201ENST00000514544 370 ntBASIC2.94□□□□□ -1.94
CXCL12P48061 RN7SKP283-201ENST00000517197 270 ntBASIC2.94□□□□□ -1.94
CXCL12P48061 LY96-202ENST00000518893 430 ntTSL 3 BASIC2.94□□□□□ -1.94
CXCL12P48061 AP004242.1-201ENST00000533701 349 ntBASIC2.94□□□□□ -1.94
CXCL12P48061 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
CXCL12P48061 AC104229.1-201ENST00000561364 255 ntBASIC2.94□□□□□ -1.94
CXCL12P48061 AC006270.2-201ENST00000578523 652 ntBASIC2.94□□□□□ -1.94
CXCL12P48061 AC104365.3-201ENST00000587011 625 ntTSL 5 BASIC2.94□□□□□ -1.94
CXCL12P48061 AC092474.3-201ENST00000603022 568 ntBASIC2.94□□□□□ -1.94
CXCL12P48061 AC087241.4-201ENST00000612441 480 ntBASIC2.94□□□□□ -1.94
CXCL12P48061 RMST_10.1-201ENST00000616309 154 ntBASIC2.94□□□□□ -1.94
CXCL12P48061 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC2.94□□□□□ -1.94
CXCL12P48061 MIR4278-201ENST00000636094 69 ntBASIC2.94□□□□□ -1.94
CXCL12P48061 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC2.94□□□□□ -1.94
CXCL12P48061 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
CXCL12P48061 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
CXCL12P48061 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC2.94□□□□□ -1.94
CXCL12P48061 AL049737.1-201ENST00000413920 1403 ntBASIC2.93□□□□□ -1.94
CXCL12P48061 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC2.93□□□□□ -1.94
CXCL12P48061 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC2.93□□□□□ -1.94
CXCL12P48061 AL512283.1-201ENST00000606756 1384 ntBASIC2.93□□□□□ -1.94
CXCL12P48061 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC2.93□□□□□ -1.94
CXCL12P48061 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC2.93□□□□□ -1.94
CXCL12P48061 AL360182.1-201ENST00000397433 468 ntBASIC2.93□□□□□ -1.94
CXCL12P48061 UBE2V1P11-201ENST00000411559 285 ntBASIC2.93□□□□□ -1.94
CXCL12P48061 RPL30P2-201ENST00000414021 291 ntBASIC2.93□□□□□ -1.94
CXCL12P48061 AL158050.1-201ENST00000416077 457 ntBASIC2.93□□□□□ -1.94
CXCL12P48061 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
CXCL12P48061 HSD52-202ENST00000436225 772 ntTSL 3 BASIC2.93□□□□□ -1.94
CXCL12P48061 AC105402.2-201ENST00000438503 358 ntBASIC2.93□□□□□ -1.94
CXCL12P48061 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC2.93□□□□□ -1.94
CXCL12P48061 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC2.93□□□□□ -1.94
CXCL12P48061 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC2.93□□□□□ -1.94
CXCL12P48061 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC2.93□□□□□ -1.94
CXCL12P48061 AC096992.1-201ENST00000459808 709 ntBASIC2.93□□□□□ -1.94
CXCL12P48061 RPL23AP14-201ENST00000468281 468 ntBASIC2.93□□□□□ -1.94
CXCL12P48061 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC2.93□□□□□ -1.94
CXCL12P48061 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC2.93□□□□□ -1.94
CXCL12P48061 AC008565.1-201ENST00000509046 885 ntBASIC2.93□□□□□ -1.94
CXCL12P48061 AC008562.1-201ENST00000521763 330 ntBASIC2.93□□□□□ -1.94
CXCL12P48061 AC083923.1-201ENST00000523708 376 ntBASIC2.93□□□□□ -1.94
CXCL12P48061 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC2.93□□□□□ -1.94
CXCL12P48061 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC2.93□□□□□ -1.94
CXCL12P48061 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC2.93□□□□□ -1.94
CXCL12P48061 CYP2C60P-201ENST00000566088 139 ntBASIC2.93□□□□□ -1.94
CXCL12P48061 AC106734.1-201ENST00000568646 663 ntBASIC2.93□□□□□ -1.94
CXCL12P48061 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC2.93□□□□□ -1.94
CXCL12P48061 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC2.93□□□□□ -1.94
CXCL12P48061 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC2.93□□□□□ -1.94
CXCL12P48061 NTAN1P1-201ENST00000603150 646 ntBASIC2.93□□□□□ -1.94
CXCL12P48061 AC007318.2-201ENST00000620999 243 ntBASIC2.93□□□□□ -1.94
CXCL12P48061 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
CXCL12P48061 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
CXCL12P48061 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC2.93□□□□□ -1.94
CXCL12P48061 AC022031.1-201ENST00000585985 2593 ntBASIC2.93□□□□□ -1.94
CXCL12P48061 MFSD8-213ENST00000641134 1327 ntBASIC2.93□□□□□ -1.94
CXCL12P48061 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC2.92□□□□□ -1.94
CXCL12P48061 AC046144.1-201ENST00000478559 1853 ntBASIC2.92□□□□□ -1.94
CXCL12P48061 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC2.92□□□□□ -1.94
CXCL12P48061 AC092326.2-201ENST00000624772 1561 ntBASIC2.92□□□□□ -1.94
CXCL12P48061 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC2.92□□□□□ -1.94
CXCL12P48061 ENSAP3-201ENST00000312710 333 ntBASIC2.92□□□□□ -1.94
CXCL12P48061 ATP5F1P6-201ENST00000402768 767 ntBASIC2.92□□□□□ -1.94
CXCL12P48061 HNRNPDP2-201ENST00000406475 478 ntBASIC2.92□□□□□ -1.94
CXCL12P48061 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC2.92□□□□□ -1.94
CXCL12P48061 OFD1P11Y-201ENST00000418213 1177 ntBASIC2.92□□□□□ -1.94
CXCL12P48061 AIMP1P1-201ENST00000418670 937 ntBASIC2.92□□□□□ -1.94
CXCL12P48061 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC2.92□□□□□ -1.94
CXCL12P48061 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC2.92□□□□□ -1.94
CXCL12P48061 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC2.92□□□□□ -1.94
CXCL12P48061 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC2.92□□□□□ -1.94
CXCL12P48061 AL513124.1-201ENST00000450410 614 ntBASIC2.92□□□□□ -1.94
CXCL12P48061 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC2.92□□□□□ -1.94
CXCL12P48061 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC2.92□□□□□ -1.94
CXCL12P48061 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC2.92□□□□□ -1.94
CXCL12P48061 OR5H4P-201ENST00000510851 923 ntBASIC2.92□□□□□ -1.94
CXCL12P48061 AC021146.1-201ENST00000511202 716 ntBASIC2.92□□□□□ -1.94
CXCL12P48061 AC027338.1-201ENST00000514840 825 ntBASIC2.92□□□□□ -1.94
CXCL12P48061 C1DP5-201ENST00000525775 383 ntBASIC2.92□□□□□ -1.94
CXCL12P48061 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
CXCL12P48061 MYRFL-202ENST00000535034 881 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
CXCL12P48061 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC2.92□□□□□ -1.94
CXCL12P48061 AP002770.2-201ENST00000543613 532 ntBASIC2.92□□□□□ -1.94
CXCL12P48061 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
CXCL12P48061 AC027104.1-201ENST00000563702 681 ntBASIC2.92□□□□□ -1.94
CXCL12P48061 GOLGA8M-203ENST00000568033 557 ntTSL 4 BASIC2.92□□□□□ -1.94
CXCL12P48061 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC2.92□□□□□ -1.94
CXCL12P48061 AC005776.1-201ENST00000603164 290 ntBASIC2.92□□□□□ -1.94
CXCL12P48061 AC015871.2-201ENST00000603605 948 ntBASIC2.92□□□□□ -1.94
CXCL12P48061 STMN1P1-201ENST00000617809 440 ntBASIC2.92□□□□□ -1.94
CXCL12P48061 FRG1HP-204ENST00000617940 757 ntBASIC2.92□□□□□ -1.94
CXCL12P48061 AC073569.3-201ENST00000619055 682 ntBASIC2.92□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 155.8 ms