Protein–RNA interactions for Protein: P43681

CHRNA4, Neuronal acetylcholine receptor subunit alpha-4, humanhuman

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4P43681 FAM106CP-201ENST00000582212 507 ntBASIC5.61□□□□□ -1.51
CHRNA4P43681 AC008521.2-201ENST00000591021 259 ntBASIC5.61□□□□□ -1.51
CHRNA4P43681 AC092747.3-201ENST00000603769 301 ntBASIC5.61□□□□□ -1.51
CHRNA4P43681 MZT1P2-201ENST00000604387 248 ntBASIC5.61□□□□□ -1.51
CHRNA4P43681 OR6R2P-201ENST00000609216 300 ntBASIC5.61□□□□□ -1.51
CHRNA4P43681 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
CHRNA4P43681 AL442639.1-201ENST00000625030 1899 ntBASIC5.61□□□□□ -1.51
CHRNA4P43681 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
CHRNA4P43681 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC5.61□□□□□ -1.51
CHRNA4P43681 BCORP1-203ENST00000513194 5093 ntBASIC5.61□□□□□ -1.51
CHRNA4P43681 AC009962.1-201ENST00000567327 3813 ntBASIC5.61□□□□□ -1.51
CHRNA4P43681 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
CHRNA4P43681 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
CHRNA4P43681 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
CHRNA4P43681 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC5.61□□□□□ -1.51
CHRNA4P43681 SLFN12-201ENST00000304905 2383 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CHRNA4P43681 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
CHRNA4P43681 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
CHRNA4P43681 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
CHRNA4P43681 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
CHRNA4P43681 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
CHRNA4P43681 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC5.6□□□□□ -1.51
CHRNA4P43681 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CHRNA4P43681 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CHRNA4P43681 KPNA2P2-201ENST00000419546 1489 ntBASIC5.6□□□□□ -1.51
CHRNA4P43681 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC5.6□□□□□ -1.51
CHRNA4P43681 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC5.6□□□□□ -1.51
CHRNA4P43681 RNU6-806P-201ENST00000365147 105 ntBASIC5.6□□□□□ -1.51
CHRNA4P43681 Y_RNA.473-201ENST00000384333 102 ntBASIC5.6□□□□□ -1.51
CHRNA4P43681 RNU6-39P-201ENST00000384344 107 ntBASIC5.6□□□□□ -1.51
CHRNA4P43681 POLHP1-201ENST00000411806 470 ntBASIC5.6□□□□□ -1.51
CHRNA4P43681 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC5.6□□□□□ -1.51
CHRNA4P43681 AL596448.1-201ENST00000415024 392 ntBASIC5.6□□□□□ -1.51
CHRNA4P43681 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC5.6□□□□□ -1.51
CHRNA4P43681 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC5.6□□□□□ -1.51
CHRNA4P43681 AL133173.1-201ENST00000423458 397 ntBASIC5.6□□□□□ -1.51
CHRNA4P43681 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC5.6□□□□□ -1.51
CHRNA4P43681 USMG5P1-201ENST00000425964 177 ntBASIC5.6□□□□□ -1.51
CHRNA4P43681 MTATP6P16-201ENST00000434543 526 ntBASIC5.6□□□□□ -1.51
CHRNA4P43681 OR6D1P-201ENST00000436165 939 ntBASIC5.6□□□□□ -1.51
CHRNA4P43681 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC5.6□□□□□ -1.51
CHRNA4P43681 LINC02210-201ENST00000444561 288 ntBASIC5.6□□□□□ -1.51
CHRNA4P43681 AL450023.1-201ENST00000450868 751 ntBASIC5.6□□□□□ -1.51
CHRNA4P43681 AZGP1P2-201ENST00000454506 345 ntBASIC5.6□□□□□ -1.51
CHRNA4P43681 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC5.6□□□□□ -1.51
CHRNA4P43681 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC5.6□□□□□ -1.51
CHRNA4P43681 RPL23AP41-201ENST00000484754 458 ntBASIC5.6□□□□□ -1.51
CHRNA4P43681 AC022447.4-201ENST00000504053 364 ntBASIC5.6□□□□□ -1.51
CHRNA4P43681 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC5.6□□□□□ -1.51
CHRNA4P43681 GLUD1P3-202ENST00000508551 200 ntBASIC5.6□□□□□ -1.51
CHRNA4P43681 SNORA25.11-201ENST00000515935 105 ntBASIC5.6□□□□□ -1.51
CHRNA4P43681 SCARNA21.2-201ENST00000516600 166 ntBASIC5.6□□□□□ -1.51
CHRNA4P43681 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC5.6□□□□□ -1.51
CHRNA4P43681 AC062004.1-202ENST00000524014 246 ntTSL 5 BASIC5.6□□□□□ -1.51
CHRNA4P43681 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC5.6□□□□□ -1.51
CHRNA4P43681 IGBP1P1-201ENST00000554337 1009 ntBASIC5.6□□□□□ -1.51
CHRNA4P43681 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC5.6□□□□□ -1.51
CHRNA4P43681 AC010547.6-201ENST00000571789 193 ntBASIC5.6□□□□□ -1.51
CHRNA4P43681 AC012669.1-201ENST00000603209 283 ntBASIC5.6□□□□□ -1.51
CHRNA4P43681 AC073657.2-201ENST00000605661 303 ntBASIC5.6□□□□□ -1.51
CHRNA4P43681 ATP5A1P2-202ENST00000616464 443 ntBASIC5.6□□□□□ -1.51
CHRNA4P43681 AC091925.2-201ENST00000625059 256 ntBASIC5.6□□□□□ -1.51
CHRNA4P43681 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC5.6□□□□□ -1.51
CHRNA4P43681 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC5.6□□□□□ -1.51
CHRNA4P43681 DDX18P4-201ENST00000511690 1966 ntBASIC5.6□□□□□ -1.51
CHRNA4P43681 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
CHRNA4P43681 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
CHRNA4P43681 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CHRNA4P43681 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC5.6□□□□□ -1.51
CHRNA4P43681 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
CHRNA4P43681 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC5.6□□□□□ -1.51
CHRNA4P43681 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
CHRNA4P43681 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC5.59□□□□□ -1.51
CHRNA4P43681 TPTE2P4-201ENST00000258589 1605 ntBASIC5.59□□□□□ -1.51
CHRNA4P43681 AC097714.1-201ENST00000511272 1647 ntBASIC5.59□□□□□ -1.51
CHRNA4P43681 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.51
CHRNA4P43681 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CHRNA4P43681 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CHRNA4P43681 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CHRNA4P43681 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CHRNA4P43681 AC083837.1-201ENST00000565297 2994 ntBASIC5.59□□□□□ -1.51
CHRNA4P43681 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC5.59□□□□□ -1.51
CHRNA4P43681 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CHRNA4P43681 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CHRNA4P43681 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC5.59□□□□□ -1.51
CHRNA4P43681 AC007938.2-201ENST00000604666 2634 ntBASIC5.59□□□□□ -1.51
CHRNA4P43681 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC5.59□□□□□ -1.51
CHRNA4P43681 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CHRNA4P43681 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CHRNA4P43681 RNA5SP46-201ENST00000362370 120 ntBASIC5.59□□□□□ -1.51
CHRNA4P43681 RNA5SP453-201ENST00000362503 119 ntBASIC5.59□□□□□ -1.51
CHRNA4P43681 RNU6-562P-201ENST00000362731 107 ntBASIC5.59□□□□□ -1.51
CHRNA4P43681 RNU6-1290P-201ENST00000362957 109 ntBASIC5.59□□□□□ -1.51
CHRNA4P43681 RNU6-343P-201ENST00000364709 104 ntBASIC5.59□□□□□ -1.51
CHRNA4P43681 SNORD50.2-201ENST00000365465 70 ntBASIC5.59□□□□□ -1.51
CHRNA4P43681 RNU6-532P-201ENST00000384318 107 ntBASIC5.59□□□□□ -1.51
CHRNA4P43681 SNORD58.1-201ENST00000391313 66 ntBASIC5.59□□□□□ -1.51
CHRNA4P43681 RNU2-20P-201ENST00000410425 191 ntBASIC5.59□□□□□ -1.51
CHRNA4P43681 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC5.59□□□□□ -1.51
CHRNA4P43681 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC5.59□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 101.4 ms