Protein–RNA interactions for Protein: P43489

TNFRSF4, Tumor necrosis factor receptor superfamily member 4, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF4P43489 RPL21P109-201ENST00000422213 475 ntBASIC3.5□□□□□ -1.85
TNFRSF4P43489 AC006548.1-201ENST00000427470 102 ntBASIC3.5□□□□□ -1.85
TNFRSF4P43489 AC006028.1-201ENST00000438379 402 ntBASIC3.5□□□□□ -1.85
TNFRSF4P43489 USP9YP22-201ENST00000438971 294 ntBASIC3.5□□□□□ -1.85
TNFRSF4P43489 MTCO1P53-201ENST00000441633 699 ntBASIC3.5□□□□□ -1.85
TNFRSF4P43489 EXOSC3P1-201ENST00000448649 500 ntBASIC3.5□□□□□ -1.85
TNFRSF4P43489 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC3.5□□□□□ -1.85
TNFRSF4P43489 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC3.5□□□□□ -1.85
TNFRSF4P43489 AC092451.1-201ENST00000480211 153 ntBASIC3.5□□□□□ -1.85
TNFRSF4P43489 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC3.5□□□□□ -1.85
TNFRSF4P43489 RPS26P15-201ENST00000488067 348 ntBASIC3.5□□□□□ -1.85
TNFRSF4P43489 AC108078.3-201ENST00000502633 489 ntBASIC3.5□□□□□ -1.85
TNFRSF4P43489 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC3.5□□□□□ -1.85
TNFRSF4P43489 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC3.5□□□□□ -1.85
TNFRSF4P43489 GMPSP1-201ENST00000514075 579 ntBASIC3.5□□□□□ -1.85
TNFRSF4P43489 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC3.5□□□□□ -1.85
TNFRSF4P43489 AC110760.3-202ENST00000515177 371 ntBASIC3.5□□□□□ -1.85
TNFRSF4P43489 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC3.5□□□□□ -1.85
TNFRSF4P43489 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC3.5□□□□□ -1.85
TNFRSF4P43489 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC3.5□□□□□ -1.85
TNFRSF4P43489 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC3.5□□□□□ -1.85
TNFRSF4P43489 UBE2NP1-201ENST00000545592 458 ntBASIC3.5□□□□□ -1.85
TNFRSF4P43489 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC3.5□□□□□ -1.85
TNFRSF4P43489 MTCYBP23-201ENST00000558717 1102 ntBASIC3.5□□□□□ -1.85
TNFRSF4P43489 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC3.5□□□□□ -1.85
TNFRSF4P43489 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC3.5□□□□□ -1.85
TNFRSF4P43489 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC3.5□□□□□ -1.85
TNFRSF4P43489 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC3.5□□□□□ -1.85
TNFRSF4P43489 AL390838.2-201ENST00000602394 274 ntBASIC3.5□□□□□ -1.85
TNFRSF4P43489 AC069545.1-201ENST00000605671 358 ntBASIC3.5□□□□□ -1.85
TNFRSF4P43489 AL353600.1-201ENST00000608148 251 ntBASIC3.5□□□□□ -1.85
TNFRSF4P43489 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC3.5□□□□□ -1.85
TNFRSF4P43489 AC015813.4-201ENST00000610469 179 ntBASIC3.5□□□□□ -1.85
TNFRSF4P43489 AC010975.3-201ENST00000618727 978 ntBASIC3.5□□□□□ -1.85
TNFRSF4P43489 AC018816.2-201ENST00000621460 353 ntBASIC3.5□□□□□ -1.85
TNFRSF4P43489 CR381572.1-201ENST00000625098 102 ntBASIC3.5□□□□□ -1.85
TNFRSF4P43489 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC3.5□□□□□ -1.85
TNFRSF4P43489 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC3.5□□□□□ -1.85
TNFRSF4P43489 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.5□□□□□ -1.85
TNFRSF4P43489 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
TNFRSF4P43489 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
TNFRSF4P43489 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC3.5□□□□□ -1.85
TNFRSF4P43489 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.49□□□□□ -1.85
TNFRSF4P43489 GDI2P1-201ENST00000429312 1336 ntBASIC3.49□□□□□ -1.85
TNFRSF4P43489 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.49□□□□□ -1.85
TNFRSF4P43489 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.49□□□□□ -1.85
TNFRSF4P43489 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
TNFRSF4P43489 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC3.49□□□□□ -1.85
TNFRSF4P43489 RNU6-657P-201ENST00000383904 107 ntBASIC3.49□□□□□ -1.85
TNFRSF4P43489 SNORA48.2-201ENST00000390926 124 ntBASIC3.49□□□□□ -1.85
TNFRSF4P43489 SLC9B1P2-201ENST00000398120 1184 ntBASIC3.49□□□□□ -1.85
TNFRSF4P43489 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC3.49□□□□□ -1.85
TNFRSF4P43489 AL583834.1-201ENST00000406943 343 ntBASIC3.49□□□□□ -1.85
TNFRSF4P43489 AC017079.2-201ENST00000416102 485 ntBASIC3.49□□□□□ -1.85
TNFRSF4P43489 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC3.49□□□□□ -1.85
TNFRSF4P43489 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC3.49□□□□□ -1.85
TNFRSF4P43489 ELOCP13-201ENST00000443934 329 ntBASIC3.49□□□□□ -1.85
TNFRSF4P43489 AC115115.1-201ENST00000449927 248 ntBASIC3.49□□□□□ -1.85
TNFRSF4P43489 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC3.49□□□□□ -1.85
TNFRSF4P43489 AL121877.1-201ENST00000453704 622 ntBASIC3.49□□□□□ -1.85
TNFRSF4P43489 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC3.49□□□□□ -1.85
TNFRSF4P43489 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC3.49□□□□□ -1.85
TNFRSF4P43489 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC3.49□□□□□ -1.85
TNFRSF4P43489 RPL31P13-201ENST00000484151 370 ntBASIC3.49□□□□□ -1.85
TNFRSF4P43489 RPL21P13-201ENST00000488305 481 ntBASIC3.49□□□□□ -1.85
TNFRSF4P43489 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
TNFRSF4P43489 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC3.49□□□□□ -1.85
TNFRSF4P43489 TMPRSS11BNL-205ENST00000514295 1262 ntBASIC3.49□□□□□ -1.85
TNFRSF4P43489 RN7SKP83-201ENST00000516512 178 ntBASIC3.49□□□□□ -1.85
TNFRSF4P43489 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC3.49□□□□□ -1.85
TNFRSF4P43489 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.49□□□□□ -1.85
TNFRSF4P43489 AC008489.1-201ENST00000524271 483 ntBASIC3.49□□□□□ -1.85
TNFRSF4P43489 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC3.49□□□□□ -1.85
TNFRSF4P43489 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.49□□□□□ -1.85
TNFRSF4P43489 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC3.49□□□□□ -1.85
TNFRSF4P43489 SMILR-201ENST00000533992 553 ntTSL 4 BASIC3.49□□□□□ -1.85
TNFRSF4P43489 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC3.49□□□□□ -1.85
TNFRSF4P43489 AL389895.1-201ENST00000554127 252 ntBASIC3.49□□□□□ -1.85
TNFRSF4P43489 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC3.49□□□□□ -1.85
TNFRSF4P43489 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC3.49□□□□□ -1.85
TNFRSF4P43489 AC138915.2-201ENST00000569776 97 ntBASIC3.49□□□□□ -1.85
TNFRSF4P43489 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC3.49□□□□□ -1.85
TNFRSF4P43489 MIR5680-201ENST00000577577 84 ntBASIC3.49□□□□□ -1.85
TNFRSF4P43489 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.49□□□□□ -1.85
TNFRSF4P43489 AC012493.2-201ENST00000595083 291 ntBASIC3.49□□□□□ -1.85
TNFRSF4P43489 AF131215.7-201ENST00000602443 707 ntBASIC3.49□□□□□ -1.85
TNFRSF4P43489 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.49□□□□□ -1.85
TNFRSF4P43489 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC3.49□□□□□ -1.85
TNFRSF4P43489 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC3.49□□□□□ -1.85
TNFRSF4P43489 MTND2P41-201ENST00000637599 773 ntBASIC3.49□□□□□ -1.85
TNFRSF4P43489 MKKS-204ENST00000639674 192 ntBASIC3.49□□□□□ -1.85
TNFRSF4P43489 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
TNFRSF4P43489 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
TNFRSF4P43489 MFF-206ENST00000392059 1710 ntTSL 5 BASIC3.49□□□□□ -1.85
TNFRSF4P43489 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC3.49□□□□□ -1.85
TNFRSF4P43489 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC3.49□□□□□ -1.85
TNFRSF4P43489 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC3.49□□□□□ -1.85
TNFRSF4P43489 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
TNFRSF4P43489 USP8P1-201ENST00000494673 3183 ntBASIC3.49□□□□□ -1.85
TNFRSF4P43489 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 199.8 ms