Protein–RNA interactions for Protein: P20585

MSH3, DNA mismatch repair protein Msh3, humanhuman

Predictions only

Length 1,137 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH3P20585 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC3.77□□□□□ -1.81
MSH3P20585 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC3.77□□□□□ -1.81
MSH3P20585 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC3.77□□□□□ -1.81
MSH3P20585 MTND2P19-201ENST00000449129 1012 ntBASIC3.77□□□□□ -1.81
MSH3P20585 AC097262.1-201ENST00000452559 548 ntBASIC3.77□□□□□ -1.81
MSH3P20585 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC3.77□□□□□ -1.81
MSH3P20585 RPL18AP17-201ENST00000455326 198 ntBASIC3.77□□□□□ -1.81
MSH3P20585 SYPL1P1-201ENST00000473622 768 ntBASIC3.77□□□□□ -1.81
MSH3P20585 MTND3P7-201ENST00000474435 343 ntBASIC3.77□□□□□ -1.81
MSH3P20585 AC087385.1-201ENST00000475062 312 ntBASIC3.77□□□□□ -1.81
MSH3P20585 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC3.77□□□□□ -1.81
MSH3P20585 XKRY-201ENST00000510392 1100 ntBASIC3.77□□□□□ -1.81
MSH3P20585 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC3.77□□□□□ -1.81
MSH3P20585 AC090502.2-201ENST00000549267 280 ntBASIC3.77□□□□□ -1.81
MSH3P20585 AL389895.1-201ENST00000554127 252 ntBASIC3.77□□□□□ -1.81
MSH3P20585 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC3.77□□□□□ -1.81
MSH3P20585 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC3.77□□□□□ -1.81
MSH3P20585 AC107982.3-201ENST00000584957 985 ntBASIC3.77□□□□□ -1.81
MSH3P20585 AL358072.1-201ENST00000604156 575 ntBASIC3.77□□□□□ -1.81
MSH3P20585 CLPTM1LP1-201ENST00000604519 484 ntBASIC3.77□□□□□ -1.81
MSH3P20585 AC010738.1-201ENST00000604970 987 ntBASIC3.77□□□□□ -1.81
MSH3P20585 AC018714.1-201ENST00000605028 208 ntBASIC3.77□□□□□ -1.81
MSH3P20585 HSPE1P14-201ENST00000605812 302 ntBASIC3.77□□□□□ -1.81
MSH3P20585 AC006270.3-201ENST00000605967 1036 ntBASIC3.77□□□□□ -1.81
MSH3P20585 C2orf27A-204ENST00000623058 969 ntBASIC3.77□□□□□ -1.81
MSH3P20585 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC3.77□□□□□ -1.81
MSH3P20585 AC087359.1-201ENST00000508335 1740 ntBASIC3.77□□□□□ -1.81
MSH3P20585 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.77□□□□□ -1.81
MSH3P20585 AL390862.1-201ENST00000635467 1469 ntBASIC3.77□□□□□ -1.81
MSH3P20585 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC3.77□□□□□ -1.81
MSH3P20585 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.76□□□□□ -1.81
MSH3P20585 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC3.76□□□□□ -1.81
MSH3P20585 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
MSH3P20585 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
MSH3P20585 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
MSH3P20585 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC3.76□□□□□ -1.81
MSH3P20585 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.76□□□□□ -1.81
MSH3P20585 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
MSH3P20585 AC117529.2-201ENST00000512159 2068 ntBASIC3.76□□□□□ -1.81
MSH3P20585 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
MSH3P20585 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
MSH3P20585 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
MSH3P20585 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
MSH3P20585 RN7SKP156-201ENST00000410308 342 ntBASIC3.76□□□□□ -1.81
MSH3P20585 RHEBP3-201ENST00000411920 351 ntBASIC3.76□□□□□ -1.81
MSH3P20585 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC3.76□□□□□ -1.81
MSH3P20585 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC3.76□□□□□ -1.81
MSH3P20585 SDCBPP2-201ENST00000424643 885 ntBASIC3.76□□□□□ -1.81
MSH3P20585 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC3.76□□□□□ -1.81
MSH3P20585 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
MSH3P20585 ISCA1P2-201ENST00000438679 421 ntBASIC3.76□□□□□ -1.81
MSH3P20585 RPS26P56-201ENST00000444468 240 ntBASIC3.76□□□□□ -1.81
MSH3P20585 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC3.76□□□□□ -1.81
MSH3P20585 ANP32BP2-201ENST00000454525 545 ntBASIC3.76□□□□□ -1.81
MSH3P20585 snoU13.7-201ENST00000459220 104 ntBASIC3.76□□□□□ -1.81
MSH3P20585 RPL30P6-201ENST00000475925 342 ntBASIC3.76□□□□□ -1.81
MSH3P20585 NCOR1P1-202ENST00000486162 291 ntBASIC3.76□□□□□ -1.81
MSH3P20585 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC3.76□□□□□ -1.81
MSH3P20585 MTCO3P28-201ENST00000513351 515 ntBASIC3.76□□□□□ -1.81
MSH3P20585 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC3.76□□□□□ -1.81
MSH3P20585 RNA5SP309-201ENST00000516670 106 ntBASIC3.76□□□□□ -1.81
MSH3P20585 SUMO2P20-201ENST00000520803 283 ntBASIC3.76□□□□□ -1.81
MSH3P20585 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC3.76□□□□□ -1.81
MSH3P20585 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
MSH3P20585 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC3.76□□□□□ -1.81
MSH3P20585 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC3.76□□□□□ -1.81
MSH3P20585 AC074029.1-201ENST00000552531 1044 ntBASIC3.76□□□□□ -1.81
MSH3P20585 SULT1C2P1-202ENST00000562418 459 ntBASIC3.76□□□□□ -1.81
MSH3P20585 AC106785.1-201ENST00000565935 262 ntBASIC3.76□□□□□ -1.81
MSH3P20585 AL512347.1-201ENST00000566420 503 ntBASIC3.76□□□□□ -1.81
MSH3P20585 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC3.76□□□□□ -1.81
MSH3P20585 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC3.76□□□□□ -1.81
MSH3P20585 AP005136.1-201ENST00000579765 429 ntBASIC3.76□□□□□ -1.81
MSH3P20585 AC244505.7-201ENST00000599675 272 ntBASIC3.76□□□□□ -1.81
MSH3P20585 AP000811.1-201ENST00000603803 651 ntBASIC3.76□□□□□ -1.81
MSH3P20585 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
MSH3P20585 AL163642.2-201ENST00000604722 1019 ntBASIC3.76□□□□□ -1.81
MSH3P20585 AL451086.1-201ENST00000605596 223 ntBASIC3.76□□□□□ -1.81
MSH3P20585 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC3.76□□□□□ -1.81
MSH3P20585 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
MSH3P20585 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
MSH3P20585 AC092650.2-201ENST00000619984 902 ntBASIC3.76□□□□□ -1.81
MSH3P20585 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
MSH3P20585 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
MSH3P20585 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC3.76□□□□□ -1.81
MSH3P20585 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
MSH3P20585 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC3.76□□□□□ -1.81
MSH3P20585 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
MSH3P20585 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.76□□□□□ -1.81
MSH3P20585 AL445523.1-201ENST00000451184 1362 ntBASIC3.76□□□□□ -1.81
MSH3P20585 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
MSH3P20585 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
MSH3P20585 RNU6-657P-201ENST00000383904 107 ntBASIC3.75□□□□□ -1.81
MSH3P20585 AL445189.1-201ENST00000405722 338 ntBASIC3.75□□□□□ -1.81
MSH3P20585 Z98941.1-201ENST00000407764 100 ntBASIC3.75□□□□□ -1.81
MSH3P20585 SNORA57.3-201ENST00000411095 141 ntBASIC3.75□□□□□ -1.81
MSH3P20585 RPS3AP9-201ENST00000417027 792 ntBASIC3.75□□□□□ -1.81
MSH3P20585 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC3.75□□□□□ -1.81
MSH3P20585 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC3.75□□□□□ -1.81
MSH3P20585 AL591419.1-201ENST00000427423 339 ntBASIC3.75□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 120.8 ms