Protein–RNA interactions for Protein: P08670

VIM, Vimentin, humanhuman

Known RBP Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VIMP08670 ATP5F1P1-201ENST00000433775 569 ntBASIC3.67□□□□□ -1.82
VIMP08670 VDAC1P3-201ENST00000434069 851 ntBASIC3.67□□□□□ -1.82
VIMP08670 PTENP1-201ENST00000447117 1215 ntBASIC3.67□□□□□ -1.82
VIMP08670 RPL18AP17-201ENST00000455326 198 ntBASIC3.67□□□□□ -1.82
VIMP08670 RPS3AP6-201ENST00000484430 795 ntBASIC3.67□□□□□ -1.82
VIMP08670 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC3.67□□□□□ -1.82
VIMP08670 AC006390.1-201ENST00000508068 283 ntBASIC3.67□□□□□ -1.82
VIMP08670 RNU6-583P-201ENST00000516012 92 ntBASIC3.67□□□□□ -1.82
VIMP08670 RNA5SP380-201ENST00000517190 98 ntBASIC3.67□□□□□ -1.82
VIMP08670 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC3.67□□□□□ -1.82
VIMP08670 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC3.67□□□□□ -1.82
VIMP08670 AC022695.1-201ENST00000522089 237 ntBASIC3.67□□□□□ -1.82
VIMP08670 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC3.67□□□□□ -1.82
VIMP08670 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC3.67□□□□□ -1.82
VIMP08670 REXO2-218ENST00000544827 880 ntTSL 3 BASIC3.67□□□□□ -1.82
VIMP08670 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.67□□□□□ -1.82
VIMP08670 AC137768.1-201ENST00000549998 553 ntBASIC3.67□□□□□ -1.82
VIMP08670 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC3.67□□□□□ -1.82
VIMP08670 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC3.67□□□□□ -1.82
VIMP08670 AC012669.1-201ENST00000603209 283 ntBASIC3.67□□□□□ -1.82
VIMP08670 SNORA51-201ENST00000606420 132 ntBASIC3.67□□□□□ -1.82
VIMP08670 AC131235.4-201ENST00000609288 620 ntBASIC3.67□□□□□ -1.82
VIMP08670 AL590282.1-201ENST00000610379 1136 ntBASIC3.67□□□□□ -1.82
VIMP08670 AC109809.1-201ENST00000619665 545 ntBASIC3.67□□□□□ -1.82
VIMP08670 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC3.67□□□□□ -1.82
VIMP08670 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
VIMP08670 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
VIMP08670 AL049780.3-201ENST00000624612 1583 ntBASIC3.67□□□□□ -1.82
VIMP08670 MTND5P27-201ENST00000428871 1720 ntBASIC3.67□□□□□ -1.82
VIMP08670 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.66□□□□□ -1.82
VIMP08670 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
VIMP08670 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
VIMP08670 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC3.66□□□□□ -1.82
VIMP08670 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
VIMP08670 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
VIMP08670 SNORD51-201ENST00000384320 80 ntBASIC3.66□□□□□ -1.82
VIMP08670 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
VIMP08670 SKINT1L-201ENST00000401057 817 ntBASIC3.66□□□□□ -1.82
VIMP08670 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC3.66□□□□□ -1.82
VIMP08670 MTND2P5-201ENST00000432656 1006 ntBASIC3.66□□□□□ -1.82
VIMP08670 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC3.66□□□□□ -1.82
VIMP08670 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC3.66□□□□□ -1.82
VIMP08670 AC125238.1-201ENST00000448842 249 ntBASIC3.66□□□□□ -1.82
VIMP08670 AC005297.2-201ENST00000450430 606 ntBASIC3.66□□□□□ -1.82
VIMP08670 snoU109.4-201ENST00000458953 143 ntBASIC3.66□□□□□ -1.82
VIMP08670 AC006463.2-201ENST00000473326 348 ntBASIC3.66□□□□□ -1.82
VIMP08670 MTCO3P35-201ENST00000485582 781 ntBASIC3.66□□□□□ -1.82
VIMP08670 RPL7P38-201ENST00000488396 739 ntBASIC3.66□□□□□ -1.82
VIMP08670 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC3.66□□□□□ -1.82
VIMP08670 NDUFA5P2-201ENST00000519723 344 ntBASIC3.66□□□□□ -1.82
VIMP08670 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC3.66□□□□□ -1.82
VIMP08670 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
VIMP08670 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC3.66□□□□□ -1.82
VIMP08670 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC3.66□□□□□ -1.82
VIMP08670 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC3.66□□□□□ -1.82
VIMP08670 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC3.66□□□□□ -1.82
VIMP08670 OR4T1P-201ENST00000554933 911 ntBASIC3.66□□□□□ -1.82
VIMP08670 HSPE1P3-201ENST00000559254 309 ntBASIC3.66□□□□□ -1.82
VIMP08670 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC3.66□□□□□ -1.82
VIMP08670 AC012182.1-201ENST00000570133 895 ntBASIC3.66□□□□□ -1.82
VIMP08670 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC3.66□□□□□ -1.82
VIMP08670 CCDC58P3-201ENST00000590792 430 ntBASIC3.66□□□□□ -1.82
VIMP08670 AC006116.5-201ENST00000591936 559 ntBASIC3.66□□□□□ -1.82
VIMP08670 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC3.66□□□□□ -1.82
VIMP08670 AC055876.5-201ENST00000605667 259 ntBASIC3.66□□□□□ -1.82
VIMP08670 AL050303.3-201ENST00000613704 284 ntBASIC3.66□□□□□ -1.82
VIMP08670 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC3.66□□□□□ -1.82
VIMP08670 AC116618.1-201ENST00000634617 774 ntBASIC3.66□□□□□ -1.82
VIMP08670 AC004925.1-201ENST00000624256 2706 ntBASIC3.66□□□□□ -1.82
VIMP08670 AL365440.1-201ENST00000436135 2167 ntBASIC3.66□□□□□ -1.82
VIMP08670 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.66□□□□□ -1.82
VIMP08670 AC007496.3-201ENST00000624987 3443 ntBASIC3.66□□□□□ -1.82
VIMP08670 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC3.65□□□□□ -1.82
VIMP08670 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC3.65□□□□□ -1.82
VIMP08670 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
VIMP08670 SNORA72.3-201ENST00000365074 132 ntBASIC3.65□□□□□ -1.83
VIMP08670 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
VIMP08670 DHFRP6-201ENST00000401776 268 ntBASIC3.65□□□□□ -1.83
VIMP08670 MTCO3P12-201ENST00000416718 547 ntBASIC3.65□□□□□ -1.83
VIMP08670 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC3.65□□□□□ -1.83
VIMP08670 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC3.65□□□□□ -1.83
VIMP08670 AL691449.1-201ENST00000426570 421 ntBASIC3.65□□□□□ -1.83
VIMP08670 RPL23AP22-201ENST00000437556 453 ntBASIC3.65□□□□□ -1.83
VIMP08670 LINC00972-202ENST00000438065 788 ntTSL 3 BASIC3.65□□□□□ -1.83
VIMP08670 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC3.65□□□□□ -1.83
VIMP08670 AL606517.1-201ENST00000446914 387 ntBASIC3.65□□□□□ -1.83
VIMP08670 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC3.65□□□□□ -1.83
VIMP08670 RPL21P134-201ENST00000453468 483 ntBASIC3.65□□□□□ -1.83
VIMP08670 USP9YP25-201ENST00000457708 443 ntBASIC3.65□□□□□ -1.83
VIMP08670 RPS4XP2-201ENST00000458402 793 ntBASIC3.65□□□□□ -1.83
VIMP08670 OR9M1P-201ENST00000459641 921 ntBASIC3.65□□□□□ -1.83
VIMP08670 MTND1P16-201ENST00000465177 898 ntBASIC3.65□□□□□ -1.83
VIMP08670 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
VIMP08670 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC3.65□□□□□ -1.83
VIMP08670 AC110792.1-201ENST00000491826 472 ntBASIC3.65□□□□□ -1.83
VIMP08670 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
VIMP08670 AC079395.1-201ENST00000510981 262 ntBASIC3.65□□□□□ -1.83
VIMP08670 AC116353.3-201ENST00000511215 249 ntBASIC3.65□□□□□ -1.83
VIMP08670 AC010625.1-201ENST00000511296 403 ntBASIC3.65□□□□□ -1.83
VIMP08670 CDH12P4-201ENST00000517835 295 ntBASIC3.65□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 78 ms