Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
RB1P06400 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC4.08□□□□□ -1.76
RB1P06400 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC4.08□□□□□ -1.76
RB1P06400 MIR4637-201ENST00000582405 84 ntBASIC4.08□□□□□ -1.76
RB1P06400 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC4.08□□□□□ -1.76
RB1P06400 AL669831.4-202ENST00000590817 238 ntBASIC4.08□□□□□ -1.76
RB1P06400 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC4.08□□□□□ -1.76
RB1P06400 TUSC7.1-201ENST00000610969 165 ntBASIC4.08□□□□□ -1.76
RB1P06400 AC087683.2-201ENST00000611384 326 ntBASIC4.08□□□□□ -1.76
RB1P06400 AC243773.3-201ENST00000613270 256 ntBASIC4.08□□□□□ -1.76
RB1P06400 AC140725.3-201ENST00000616193 880 ntBASIC4.08□□□□□ -1.76
RB1P06400 Xist_exon1.1-201ENST00000618930 85 ntBASIC4.08□□□□□ -1.76
RB1P06400 AP000676.4-201ENST00000624659 623 ntBASIC4.08□□□□□ -1.76
RB1P06400 AL390862.1-201ENST00000635467 1469 ntBASIC4.08□□□□□ -1.76
RB1P06400 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC4.08□□□□□ -1.76
RB1P06400 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
RB1P06400 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
RB1P06400 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC4.07□□□□□ -1.76
RB1P06400 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC4.07□□□□□ -1.76
RB1P06400 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC4.07□□□□□ -1.76
RB1P06400 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC4.07□□□□□ -1.76
RB1P06400 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC4.07□□□□□ -1.76
RB1P06400 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
RB1P06400 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC4.07□□□□□ -1.76
RB1P06400 ZNF962P-201ENST00000443465 3140 ntBASIC4.07□□□□□ -1.76
RB1P06400 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
RB1P06400 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
RB1P06400 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC4.07□□□□□ -1.76
RB1P06400 CUBN-201ENST00000377823 705 ntTSL 3 BASIC4.07□□□□□ -1.76
RB1P06400 MIR93-201ENST00000385024 80 ntBASIC4.07□□□□□ -1.76
RB1P06400 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC4.07□□□□□ -1.76
RB1P06400 RNA5SP56-201ENST00000410277 118 ntBASIC4.07□□□□□ -1.76
RB1P06400 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC4.07□□□□□ -1.76
RB1P06400 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC4.07□□□□□ -1.76
RB1P06400 AC006960.1-201ENST00000419980 153 ntBASIC4.07□□□□□ -1.76
RB1P06400 CYCSP32-201ENST00000440548 321 ntBASIC4.07□□□□□ -1.76
RB1P06400 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC4.07□□□□□ -1.76
RB1P06400 UBDP1-202ENST00000457888 382 ntBASIC4.07□□□□□ -1.76
RB1P06400 AC026410.2-201ENST00000460281 156 ntBASIC4.07□□□□□ -1.76
RB1P06400 AP000873.1-201ENST00000463987 400 ntBASIC4.07□□□□□ -1.76
RB1P06400 RN7SL585P-201ENST00000470538 280 ntBASIC4.07□□□□□ -1.76
RB1P06400 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC4.07□□□□□ -1.76
RB1P06400 MTCYBP17-201ENST00000503579 789 ntBASIC4.07□□□□□ -1.76
RB1P06400 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC4.07□□□□□ -1.76
RB1P06400 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC4.07□□□□□ -1.76
RB1P06400 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC4.07□□□□□ -1.76
RB1P06400 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC4.07□□□□□ -1.76
RB1P06400 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC4.07□□□□□ -1.76
RB1P06400 AC022695.1-201ENST00000522089 237 ntBASIC4.07□□□□□ -1.76
RB1P06400 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC4.07□□□□□ -1.76
RB1P06400 PDCL2P2-201ENST00000533651 189 ntBASIC4.07□□□□□ -1.76
RB1P06400 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC4.07□□□□□ -1.76
RB1P06400 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC4.07□□□□□ -1.76
RB1P06400 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
RB1P06400 DUXAP1-201ENST00000556632 463 ntBASIC4.07□□□□□ -1.76
RB1P06400 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC4.07□□□□□ -1.76
RB1P06400 AL512347.1-201ENST00000566420 503 ntBASIC4.07□□□□□ -1.76
RB1P06400 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC4.07□□□□□ -1.76
RB1P06400 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC4.07□□□□□ -1.76
RB1P06400 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC4.07□□□□□ -1.76
RB1P06400 AL158042.1-201ENST00000605338 460 ntBASIC4.07□□□□□ -1.76
RB1P06400 HMGN2P28-201ENST00000606102 262 ntBASIC4.07□□□□□ -1.76
RB1P06400 AC021755.4-201ENST00000616620 456 ntBASIC4.07□□□□□ -1.76
RB1P06400 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC4.07□□□□□ -1.76
RB1P06400 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC4.07□□□□□ -1.76
RB1P06400 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
RB1P06400 AC138649.5-201ENST00000637456 137 ntBASIC4.07□□□□□ -1.76
RB1P06400 AL392088.2-201ENST00000637607 285 ntBASIC4.07□□□□□ -1.76
RB1P06400 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC4.07□□□□□ -1.76
RB1P06400 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC4.07□□□□□ -1.76
RB1P06400 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
RB1P06400 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC4.07□□□□□ -1.76
RB1P06400 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
RB1P06400 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC4.07□□□□□ -1.76
RB1P06400 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC4.07□□□□□ -1.76
RB1P06400 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC4.07□□□□□ -1.76
RB1P06400 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
RB1P06400 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
RB1P06400 NUP58P1-201ENST00000502546 1738 ntBASIC4.07□□□□□ -1.76
RB1P06400 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
RB1P06400 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC4.06□□□□□ -1.76
RB1P06400 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
RB1P06400 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
RB1P06400 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
RB1P06400 RNA5SP52-201ENST00000362448 134 ntBASIC4.06□□□□□ -1.76
RB1P06400 RNU6-157P-201ENST00000383957 107 ntBASIC4.06□□□□□ -1.76
RB1P06400 OFD1P12Y-201ENST00000427963 1207 ntBASIC4.06□□□□□ -1.76
RB1P06400 AC097713.2-201ENST00000430199 356 ntBASIC4.06□□□□□ -1.76
RB1P06400 OFD1P13Y-201ENST00000431179 1232 ntBASIC4.06□□□□□ -1.76
RB1P06400 MTND1P32-201ENST00000433043 938 ntBASIC4.06□□□□□ -1.76
RB1P06400 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC4.06□□□□□ -1.76
RB1P06400 RPS25P9-201ENST00000435591 252 ntBASIC4.06□□□□□ -1.76
RB1P06400 RPL7P28-201ENST00000437739 740 ntBASIC4.06□□□□□ -1.76
RB1P06400 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC4.06□□□□□ -1.76
RB1P06400 RPL26P28-201ENST00000451325 435 ntBASIC4.06□□□□□ -1.76
RB1P06400 AC073387.1-201ENST00000453261 709 ntBASIC4.06□□□□□ -1.76
RB1P06400 ANKRD26P4-201ENST00000455755 950 ntBASIC4.06□□□□□ -1.76
RB1P06400 snoU13.3-201ENST00000459441 104 ntBASIC4.06□□□□□ -1.76
RB1P06400 AC006517.1-201ENST00000480485 328 ntBASIC4.06□□□□□ -1.76
RB1P06400 AC026412.2-201ENST00000512270 1075 ntBASIC4.06□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 154.3 ms