Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
CNOT4O95628 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC4.73□□□□□ -1.65
CNOT4O95628 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
CNOT4O95628 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC4.73□□□□□ -1.65
CNOT4O95628 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC4.73□□□□□ -1.65
CNOT4O95628 AL592148.3-201ENST00000608771 2646 ntBASIC4.73□□□□□ -1.65
CNOT4O95628 C17orf78-204ENST00000615133 1862 ntAPPRIS P3 TSL 1 (best) BASIC4.73□□□□□ -1.65
CNOT4O95628 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
CNOT4O95628 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC4.72□□□□□ -1.65
CNOT4O95628 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC4.72□□□□□ -1.65
CNOT4O95628 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
CNOT4O95628 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC4.72□□□□□ -1.65
CNOT4O95628 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
CNOT4O95628 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
CNOT4O95628 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC4.72□□□□□ -1.65
CNOT4O95628 RNU1-130P-201ENST00000363930 160 ntBASIC4.72□□□□□ -1.65
CNOT4O95628 RNU6-744P-201ENST00000365557 107 ntBASIC4.72□□□□□ -1.65
CNOT4O95628 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
CNOT4O95628 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC4.72□□□□□ -1.65
CNOT4O95628 RNU6-1316P-201ENST00000384242 108 ntBASIC4.72□□□□□ -1.65
CNOT4O95628 AL031679.1-201ENST00000400616 525 ntBASIC4.72□□□□□ -1.65
CNOT4O95628 PPIAP9-201ENST00000403866 498 ntBASIC4.72□□□□□ -1.65
CNOT4O95628 TXNP7-201ENST00000406296 293 ntBASIC4.72□□□□□ -1.65
CNOT4O95628 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC4.72□□□□□ -1.65
CNOT4O95628 FABP7P2-201ENST00000429946 379 ntBASIC4.72□□□□□ -1.65
CNOT4O95628 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC4.72□□□□□ -1.65
CNOT4O95628 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC4.72□□□□□ -1.65
CNOT4O95628 NDUFB4P8-201ENST00000435351 367 ntBASIC4.72□□□□□ -1.65
CNOT4O95628 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
CNOT4O95628 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC4.72□□□□□ -1.65
CNOT4O95628 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC4.72□□□□□ -1.65
CNOT4O95628 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC4.72□□□□□ -1.65
CNOT4O95628 AL035090.1-201ENST00000454835 332 ntBASIC4.72□□□□□ -1.65
CNOT4O95628 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC4.72□□□□□ -1.65
CNOT4O95628 IGBP1P4-201ENST00000503202 879 ntBASIC4.72□□□□□ -1.65
CNOT4O95628 AC010587.1-201ENST00000505809 469 ntBASIC4.72□□□□□ -1.65
CNOT4O95628 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC4.72□□□□□ -1.65
CNOT4O95628 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC4.72□□□□□ -1.65
CNOT4O95628 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC4.72□□□□□ -1.65
CNOT4O95628 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC4.72□□□□□ -1.65
CNOT4O95628 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC4.72□□□□□ -1.65
CNOT4O95628 SNORD60.2-201ENST00000516883 86 ntBASIC4.72□□□□□ -1.65
CNOT4O95628 SCARNA20.4-201ENST00000516969 131 ntBASIC4.72□□□□□ -1.65
CNOT4O95628 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC4.72□□□□□ -1.65
CNOT4O95628 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC4.72□□□□□ -1.65
CNOT4O95628 AC100784.1-201ENST00000522790 310 ntBASIC4.72□□□□□ -1.65
CNOT4O95628 AP005597.4-201ENST00000526762 229 ntBASIC4.72□□□□□ -1.65
CNOT4O95628 AP000676.2-201ENST00000529711 301 ntBASIC4.72□□□□□ -1.65
CNOT4O95628 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC4.72□□□□□ -1.65
CNOT4O95628 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC4.72□□□□□ -1.65
CNOT4O95628 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC4.72□□□□□ -1.65
CNOT4O95628 AC024940.3-201ENST00000538551 316 ntBASIC4.72□□□□□ -1.65
CNOT4O95628 AC023050.3-201ENST00000541142 333 ntBASIC4.72□□□□□ -1.65
CNOT4O95628 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC4.72□□□□□ -1.65
CNOT4O95628 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC4.72□□□□□ -1.65
CNOT4O95628 AC005668.1-201ENST00000571142 476 ntBASIC4.72□□□□□ -1.65
CNOT4O95628 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC4.72□□□□□ -1.65
CNOT4O95628 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC4.72□□□□□ -1.65
CNOT4O95628 MIR4436B2-201ENST00000581415 91 ntBASIC4.72□□□□□ -1.65
CNOT4O95628 MIR4436B1-201ENST00000583272 91 ntBASIC4.72□□□□□ -1.65
CNOT4O95628 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC4.72□□□□□ -1.65
CNOT4O95628 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC4.72□□□□□ -1.65
CNOT4O95628 AC069307.1-201ENST00000602820 447 ntBASIC4.72□□□□□ -1.65
CNOT4O95628 RNA5SP108-201ENST00000605921 117 ntBASIC4.72□□□□□ -1.65
CNOT4O95628 Z98200.1-201ENST00000607298 470 ntBASIC4.72□□□□□ -1.65
CNOT4O95628 AC093838.1-201ENST00000613014 469 ntBASIC4.72□□□□□ -1.65
CNOT4O95628 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC4.72□□□□□ -1.65
CNOT4O95628 AC100827.5-201ENST00000615883 426 ntBASIC4.72□□□□□ -1.65
CNOT4O95628 AC006065.5-201ENST00000623427 349 ntBASIC4.72□□□□□ -1.65
CNOT4O95628 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC4.72□□□□□ -1.65
CNOT4O95628 MTND5P42-201ENST00000637720 498 ntBASIC4.72□□□□□ -1.65
CNOT4O95628 MTND4P27-201ENST00000450813 1354 ntBASIC4.72□□□□□ -1.65
CNOT4O95628 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC4.72□□□□□ -1.65
CNOT4O95628 AL672167.1-205ENST00000641112 3080 ntBASIC4.72□□□□□ -1.65
CNOT4O95628 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC4.72□□□□□ -1.65
CNOT4O95628 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC4.72□□□□□ -1.65
CNOT4O95628 ZNF652P1-201ENST00000442420 1309 ntBASIC4.72□□□□□ -1.65
CNOT4O95628 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
CNOT4O95628 ZNF736P3Y-201ENST00000428264 1465 ntBASIC4.71□□□□□ -1.66
CNOT4O95628 RN7SKP153-201ENST00000365026 316 ntBASIC4.71□□□□□ -1.66
CNOT4O95628 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
CNOT4O95628 IARS-201ENST00000375627 697 ntTSL 3 BASIC4.71□□□□□ -1.66
CNOT4O95628 RNU6-510P-201ENST00000391239 108 ntBASIC4.71□□□□□ -1.66
CNOT4O95628 AC078974.1-201ENST00000411597 223 ntBASIC4.71□□□□□ -1.66
CNOT4O95628 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC4.71□□□□□ -1.66
CNOT4O95628 AC092832.1-201ENST00000422934 400 ntBASIC4.71□□□□□ -1.66
CNOT4O95628 IGKV1OR9-1-201ENST00000424370 284 ntBASIC4.71□□□□□ -1.66
CNOT4O95628 RPL36AP15-201ENST00000444514 266 ntBASIC4.71□□□□□ -1.66
CNOT4O95628 RPS20P32-201ENST00000456044 356 ntBASIC4.71□□□□□ -1.66
CNOT4O95628 AC108161.1-201ENST00000461060 402 ntBASIC4.71□□□□□ -1.66
CNOT4O95628 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC4.71□□□□□ -1.66
CNOT4O95628 AC090453.1-201ENST00000495560 436 ntBASIC4.71□□□□□ -1.66
CNOT4O95628 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC4.71□□□□□ -1.66
CNOT4O95628 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC4.71□□□□□ -1.66
CNOT4O95628 GAPDHP56-201ENST00000506031 988 ntBASIC4.71□□□□□ -1.66
CNOT4O95628 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC4.71□□□□□ -1.66
CNOT4O95628 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC4.71□□□□□ -1.66
CNOT4O95628 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC4.71□□□□□ -1.66
CNOT4O95628 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC4.71□□□□□ -1.66
CNOT4O95628 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC4.71□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms