Protein–RNA interactions for Protein: O14627

CDX4, Homeobox protein CDX-4, humanhuman

Predicted RBP Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX4O14627 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC3.28□□□□□ -1.88
CDX4O14627 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC3.28□□□□□ -1.88
CDX4O14627 OR10V3P-201ENST00000525712 725 ntBASIC3.28□□□□□ -1.88
CDX4O14627 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
CDX4O14627 CASP1-212ENST00000531166 300 ntTSL 5 BASIC3.28□□□□□ -1.88
CDX4O14627 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC3.28□□□□□ -1.88
CDX4O14627 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC3.28□□□□□ -1.88
CDX4O14627 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC3.28□□□□□ -1.88
CDX4O14627 AC067852.3-201ENST00000589177 561 ntBASIC3.28□□□□□ -1.88
CDX4O14627 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC3.28□□□□□ -1.88
CDX4O14627 AC008687.2-201ENST00000597865 520 ntBASIC3.28□□□□□ -1.88
CDX4O14627 AC234772.3-201ENST00000602277 528 ntBASIC3.28□□□□□ -1.88
CDX4O14627 OR2AS2P-201ENST00000606902 342 ntBASIC3.28□□□□□ -1.88
CDX4O14627 AC106052.1-201ENST00000608029 497 ntBASIC3.28□□□□□ -1.88
CDX4O14627 AL592148.2-201ENST00000612210 372 ntBASIC3.28□□□□□ -1.88
CDX4O14627 AC110801.1-201ENST00000623590 212 ntBASIC3.28□□□□□ -1.88
CDX4O14627 FAM157B-203ENST00000639350 358 ntBASIC3.28□□□□□ -1.88
CDX4O14627 ZNF663P-202ENST00000641770 1131 ntBASIC3.28□□□□□ -1.88
CDX4O14627 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
CDX4O14627 ZNF33CP-201ENST00000432492 2030 ntBASIC3.27□□□□□ -1.89
CDX4O14627 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
CDX4O14627 SRP72P2-201ENST00000344851 1979 ntBASIC3.27□□□□□ -1.89
CDX4O14627 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC3.27□□□□□ -1.89
CDX4O14627 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.27□□□□□ -1.89
CDX4O14627 MTND5P28-201ENST00000438005 1594 ntBASIC3.27□□□□□ -1.89
CDX4O14627 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
CDX4O14627 MIR449A-201ENST00000362113 91 ntBASIC3.27□□□□□ -1.89
CDX4O14627 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.27□□□□□ -1.89
CDX4O14627 RNU6-1293P-201ENST00000384077 107 ntBASIC3.27□□□□□ -1.89
CDX4O14627 MTND4LP20-201ENST00000402379 270 ntBASIC3.27□□□□□ -1.89
CDX4O14627 AL079342.2-201ENST00000403367 482 ntBASIC3.27□□□□□ -1.89
CDX4O14627 RNA5SP104-201ENST00000410989 118 ntBASIC3.27□□□□□ -1.89
CDX4O14627 MTND4P22-201ENST00000413116 1169 ntBASIC3.27□□□□□ -1.89
CDX4O14627 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC3.27□□□□□ -1.89
CDX4O14627 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC3.27□□□□□ -1.89
CDX4O14627 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC3.27□□□□□ -1.89
CDX4O14627 ELOCP8-201ENST00000439309 332 ntBASIC3.27□□□□□ -1.89
CDX4O14627 ELOCP15-201ENST00000442090 332 ntBASIC3.27□□□□□ -1.89
CDX4O14627 AL591719.1-201ENST00000444669 744 ntBASIC3.27□□□□□ -1.89
CDX4O14627 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC3.27□□□□□ -1.89
CDX4O14627 MRPL42P4-201ENST00000453267 443 ntBASIC3.27□□□□□ -1.89
CDX4O14627 ANP32BP2-201ENST00000454525 545 ntBASIC3.27□□□□□ -1.89
CDX4O14627 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC3.27□□□□□ -1.89
CDX4O14627 KC877373.1-201ENST00000479066 408 ntBASIC3.27□□□□□ -1.89
CDX4O14627 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
CDX4O14627 MTCYBP35-201ENST00000503630 1137 ntBASIC3.27□□□□□ -1.89
CDX4O14627 AC093534.1-201ENST00000504977 132 ntBASIC3.27□□□□□ -1.89
CDX4O14627 SNX5P1-201ENST00000505757 1041 ntBASIC3.27□□□□□ -1.89
CDX4O14627 AC113420.1-201ENST00000507903 571 ntBASIC3.27□□□□□ -1.89
CDX4O14627 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC3.27□□□□□ -1.89
CDX4O14627 AC048346.1-201ENST00000510247 144 ntBASIC3.27□□□□□ -1.89
CDX4O14627 RPL12P22-201ENST00000519073 490 ntBASIC3.27□□□□□ -1.89
CDX4O14627 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC3.27□□□□□ -1.89
CDX4O14627 AC087276.1-201ENST00000529659 480 ntBASIC3.27□□□□□ -1.89
CDX4O14627 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC3.27□□□□□ -1.89
CDX4O14627 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC3.27□□□□□ -1.89
CDX4O14627 AC008638.3-201ENST00000603341 463 ntBASIC3.27□□□□□ -1.89
CDX4O14627 AC025946.2-201ENST00000603398 234 ntBASIC3.27□□□□□ -1.89
CDX4O14627 Z99289.3-201ENST00000605586 594 ntBASIC3.27□□□□□ -1.89
CDX4O14627 AC073657.2-201ENST00000605661 303 ntBASIC3.27□□□□□ -1.89
CDX4O14627 BRDTP1-201ENST00000605735 677 ntBASIC3.27□□□□□ -1.89
CDX4O14627 AC024060.1-201ENST00000607052 494 ntBASIC3.27□□□□□ -1.89
CDX4O14627 AC105429.2-201ENST00000610567 517 ntBASIC3.27□□□□□ -1.89
CDX4O14627 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC3.27□□□□□ -1.89
CDX4O14627 ATP5A1P2-202ENST00000616464 443 ntBASIC3.27□□□□□ -1.89
CDX4O14627 AP000484.1-201ENST00000620067 1252 ntBASIC3.27□□□□□ -1.89
CDX4O14627 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC3.27□□□□□ -1.89
CDX4O14627 RNU6-156P-201ENST00000621869 107 ntBASIC3.27□□□□□ -1.89
CDX4O14627 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC3.27□□□□□ -1.89
CDX4O14627 AP000676.4-201ENST00000624659 623 ntBASIC3.27□□□□□ -1.89
CDX4O14627 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
CDX4O14627 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
CDX4O14627 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.27□□□□□ -1.89
CDX4O14627 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC3.27□□□□□ -1.89
CDX4O14627 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
CDX4O14627 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
CDX4O14627 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
CDX4O14627 MTND4P8-201ENST00000514997 1362 ntBASIC3.26□□□□□ -1.89
CDX4O14627 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC3.26□□□□□ -1.89
CDX4O14627 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.26□□□□□ -1.89
CDX4O14627 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.26□□□□□ -1.89
CDX4O14627 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
CDX4O14627 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
CDX4O14627 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.26□□□□□ -1.89
CDX4O14627 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
CDX4O14627 RNA5SP197-201ENST00000363357 119 ntBASIC3.26□□□□□ -1.89
CDX4O14627 RNU4-51P-201ENST00000364206 140 ntBASIC3.26□□□□□ -1.89
CDX4O14627 AL121978.1-201ENST00000402778 359 ntBASIC3.26□□□□□ -1.89
CDX4O14627 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC3.26□□□□□ -1.89
CDX4O14627 OFD1P2Y-201ENST00000421895 1149 ntBASIC3.26□□□□□ -1.89
CDX4O14627 AC092648.1-201ENST00000425870 423 ntBASIC3.26□□□□□ -1.89
CDX4O14627 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC3.26□□□□□ -1.89
CDX4O14627 AC010881.1-201ENST00000433830 235 ntBASIC3.26□□□□□ -1.89
CDX4O14627 USP9YP7-201ENST00000436723 430 ntBASIC3.26□□□□□ -1.89
CDX4O14627 RPL7P28-201ENST00000437739 740 ntBASIC3.26□□□□□ -1.89
CDX4O14627 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC3.26□□□□□ -1.89
CDX4O14627 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC3.26□□□□□ -1.89
CDX4O14627 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC3.26□□□□□ -1.89
CDX4O14627 RPL7P59-201ENST00000447700 943 ntBASIC3.26□□□□□ -1.89
CDX4O14627 USP9YP32-201ENST00000452432 430 ntBASIC3.26□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 123.2 ms