Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 Y_RNA.194-201ENST00000363985 102 ntBASIC4.55□□□□□ -1.68
FOXN3O00409 Y_RNA.553-201ENST00000384670 102 ntBASIC4.55□□□□□ -1.68
FOXN3O00409 RNU6-821P-201ENST00000390995 107 ntBASIC4.55□□□□□ -1.68
FOXN3O00409 RN7SKP266-201ENST00000410232 287 ntBASIC4.55□□□□□ -1.68
FOXN3O00409 RNA5SP56-201ENST00000410277 118 ntBASIC4.55□□□□□ -1.68
FOXN3O00409 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC4.55□□□□□ -1.68
FOXN3O00409 RPL26P29-201ENST00000415623 438 ntBASIC4.55□□□□□ -1.68
FOXN3O00409 MTCO2P34-201ENST00000421994 607 ntBASIC4.55□□□□□ -1.68
FOXN3O00409 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC4.55□□□□□ -1.68
FOXN3O00409 AL445669.1-201ENST00000426743 755 ntBASIC4.55□□□□□ -1.68
FOXN3O00409 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC4.55□□□□□ -1.68
FOXN3O00409 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC4.55□□□□□ -1.68
FOXN3O00409 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC4.55□□□□□ -1.68
FOXN3O00409 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC4.55□□□□□ -1.68
FOXN3O00409 AC239367.2-201ENST00000447309 705 ntBASIC4.55□□□□□ -1.68
FOXN3O00409 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC4.55□□□□□ -1.68
FOXN3O00409 DNAJC19P1-201ENST00000455312 319 ntBASIC4.55□□□□□ -1.68
FOXN3O00409 RPL23AP24-201ENST00000458203 385 ntBASIC4.55□□□□□ -1.68
FOXN3O00409 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC4.55□□□□□ -1.68
FOXN3O00409 RN7SL691P-201ENST00000494487 301 ntBASIC4.55□□□□□ -1.68
FOXN3O00409 COX7A2P2-201ENST00000505291 250 ntBASIC4.55□□□□□ -1.68
FOXN3O00409 AC022447.3-201ENST00000506865 495 ntBASIC4.55□□□□□ -1.68
FOXN3O00409 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC4.55□□□□□ -1.68
FOXN3O00409 RNA5SP49-201ENST00000516450 115 ntBASIC4.55□□□□□ -1.68
FOXN3O00409 OR4R3P-201ENST00000525084 838 ntBASIC4.55□□□□□ -1.68
FOXN3O00409 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.55□□□□□ -1.68
FOXN3O00409 RFPL1S-203ENST00000539579 330 ntBASIC4.55□□□□□ -1.68
FOXN3O00409 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC4.55□□□□□ -1.68
FOXN3O00409 AL391156.1-201ENST00000554965 554 ntBASIC4.55□□□□□ -1.68
FOXN3O00409 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC4.55□□□□□ -1.68
FOXN3O00409 AC027807.1-201ENST00000559921 996 ntBASIC4.55□□□□□ -1.68
FOXN3O00409 AC091489.2-201ENST00000566263 604 ntBASIC4.55□□□□□ -1.68
FOXN3O00409 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC4.55□□□□□ -1.68
FOXN3O00409 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC4.55□□□□□ -1.68
FOXN3O00409 AC083760.1-201ENST00000589621 670 ntBASIC4.55□□□□□ -1.68
FOXN3O00409 AC064872.1-201ENST00000604823 1072 ntBASIC4.55□□□□□ -1.68
FOXN3O00409 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC4.55□□□□□ -1.68
FOXN3O00409 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC4.55□□□□□ -1.68
FOXN3O00409 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
FOXN3O00409 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
FOXN3O00409 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.54□□□□□ -1.68
FOXN3O00409 MARK2P15-201ENST00000432204 2186 ntBASIC4.54□□□□□ -1.68
FOXN3O00409 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC4.54□□□□□ -1.68
FOXN3O00409 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
FOXN3O00409 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
FOXN3O00409 RNU1-14P-201ENST00000362759 152 ntBASIC4.54□□□□□ -1.68
FOXN3O00409 RNU6-192P-201ENST00000391253 100 ntBASIC4.54□□□□□ -1.68
FOXN3O00409 MIR1305-201ENST00000408300 86 ntBASIC4.54□□□□□ -1.68
FOXN3O00409 RPL17P12-201ENST00000413391 526 ntBASIC4.54□□□□□ -1.68
FOXN3O00409 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC4.54□□□□□ -1.68
FOXN3O00409 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC4.54□□□□□ -1.68
FOXN3O00409 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC4.54□□□□□ -1.68
FOXN3O00409 RPS3AP54-201ENST00000435535 734 ntBASIC4.54□□□□□ -1.68
FOXN3O00409 RSU1P2-202ENST00000437884 485 ntBASIC4.54□□□□□ -1.68
FOXN3O00409 MTCO1P19-201ENST00000443487 500 ntBASIC4.54□□□□□ -1.68
FOXN3O00409 RPL7P36-201ENST00000444633 681 ntBASIC4.54□□□□□ -1.68
FOXN3O00409 GDI2P2-201ENST00000445131 608 ntBASIC4.54□□□□□ -1.68
FOXN3O00409 Z95327.1-201ENST00000446082 482 ntBASIC4.54□□□□□ -1.68
FOXN3O00409 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC4.54□□□□□ -1.68
FOXN3O00409 AC146507.1-201ENST00000468335 354 ntBASIC4.54□□□□□ -1.68
FOXN3O00409 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC4.54□□□□□ -1.68
FOXN3O00409 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC4.54□□□□□ -1.68
FOXN3O00409 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC4.54□□□□□ -1.68
FOXN3O00409 TMEM248P1-201ENST00000510579 951 ntBASIC4.54□□□□□ -1.68
FOXN3O00409 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC4.54□□□□□ -1.68
FOXN3O00409 AC022880.1-201ENST00000534017 973 ntBASIC4.54□□□□□ -1.68
FOXN3O00409 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC4.54□□□□□ -1.68
FOXN3O00409 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC4.54□□□□□ -1.68
FOXN3O00409 AP001094.1-201ENST00000579805 193 ntBASIC4.54□□□□□ -1.68
FOXN3O00409 MIR4307-201ENST00000582802 84 ntBASIC4.54□□□□□ -1.68
FOXN3O00409 TTN-AS1-232ENST00000589487 1077 ntTSL 5 BASIC4.54□□□□□ -1.68
FOXN3O00409 AP000403.1-201ENST00000603349 851 ntBASIC4.54□□□□□ -1.68
FOXN3O00409 AC112187.2-201ENST00000604345 283 ntBASIC4.54□□□□□ -1.68
FOXN3O00409 AL139286.2-201ENST00000606838 396 ntBASIC4.54□□□□□ -1.68
FOXN3O00409 AC091965.4-201ENST00000607691 587 ntBASIC4.54□□□□□ -1.68
FOXN3O00409 AC019193.2-201ENST00000610012 634 ntBASIC4.54□□□□□ -1.68
FOXN3O00409 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC4.54□□□□□ -1.68
FOXN3O00409 SNX18P1Y-201ENST00000616231 511 ntBASIC4.54□□□□□ -1.68
FOXN3O00409 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC4.54□□□□□ -1.68
FOXN3O00409 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC4.54□□□□□ -1.68
FOXN3O00409 CRYM-AS1-204ENST00000637983 556 ntBASIC4.54□□□□□ -1.68
FOXN3O00409 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
FOXN3O00409 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC4.54□□□□□ -1.68
FOXN3O00409 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC4.54□□□□□ -1.68
FOXN3O00409 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC4.54□□□□□ -1.68
FOXN3O00409 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.53□□□□□ -1.68
FOXN3O00409 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
FOXN3O00409 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
FOXN3O00409 ZNF33BP1-201ENST00000452497 1834 ntBASIC4.53□□□□□ -1.68
FOXN3O00409 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC4.53□□□□□ -1.68
FOXN3O00409 AC006378.2-201ENST00000623178 2476 ntBASIC4.53□□□□□ -1.68
FOXN3O00409 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.53□□□□□ -1.68
FOXN3O00409 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
FOXN3O00409 DCAF13P1-201ENST00000495256 1330 ntBASIC4.53□□□□□ -1.68
FOXN3O00409 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC4.53□□□□□ -1.68
FOXN3O00409 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC4.53□□□□□ -1.68
FOXN3O00409 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC4.53□□□□□ -1.68
FOXN3O00409 AL121657.1-201ENST00000327215 531 ntBASIC4.53□□□□□ -1.68
FOXN3O00409 RNU6-97P-201ENST00000363387 104 ntBASIC4.53□□□□□ -1.68
FOXN3O00409 RNU1-132P-201ENST00000364300 164 ntBASIC4.53□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 91.1 ms