Protein–RNA interactions for Protein: Q9Y587

AP4S1, AP-4 complex subunit sigma-1, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1Q9Y587 HMGB1P3-201ENST00000502802 616 ntBASIC2.28□□□□□ -2.04
AP4S1Q9Y587 AC010625.1-201ENST00000511296 403 ntBASIC2.28□□□□□ -2.04
AP4S1Q9Y587 TTC39CP1-201ENST00000512513 755 ntBASIC2.28□□□□□ -2.04
AP4S1Q9Y587 RN7SKP82-201ENST00000516786 223 ntBASIC2.28□□□□□ -2.04
AP4S1Q9Y587 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC2.28□□□□□ -2.04
AP4S1Q9Y587 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
AP4S1Q9Y587 AC079600.2-201ENST00000550076 130 ntBASIC2.28□□□□□ -2.04
AP4S1Q9Y587 BDH2P1-201ENST00000602288 736 ntBASIC2.28□□□□□ -2.04
AP4S1Q9Y587 AP003117.1-201ENST00000602771 554 ntBASIC2.28□□□□□ -2.04
AP4S1Q9Y587 CKAP2P1-201ENST00000555477 2049 ntBASIC2.28□□□□□ -2.04
AP4S1Q9Y587 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC2.28□□□□□ -2.04
AP4S1Q9Y587 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC2.28□□□□□ -2.04
AP4S1Q9Y587 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
AP4S1Q9Y587 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC2.27□□□□□ -2.05
AP4S1Q9Y587 WARS2P1-201ENST00000429678 537 ntBASIC2.27□□□□□ -2.05
AP4S1Q9Y587 AC091390.1-201ENST00000433904 331 ntBASIC2.27□□□□□ -2.05
AP4S1Q9Y587 RPL21P112-201ENST00000434403 463 ntBASIC2.27□□□□□ -2.05
AP4S1Q9Y587 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC2.27□□□□□ -2.05
AP4S1Q9Y587 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.27□□□□□ -2.05
AP4S1Q9Y587 AC020898.1-201ENST00000474167 787 ntBASIC2.27□□□□□ -2.05
AP4S1Q9Y587 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC2.27□□□□□ -2.05
AP4S1Q9Y587 AC090096.1-201ENST00000489168 390 ntBASIC2.27□□□□□ -2.05
AP4S1Q9Y587 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC2.27□□□□□ -2.05
AP4S1Q9Y587 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.27□□□□□ -2.05
AP4S1Q9Y587 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC2.27□□□□□ -2.05
AP4S1Q9Y587 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC2.27□□□□□ -2.05
AP4S1Q9Y587 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC2.27□□□□□ -2.05
AP4S1Q9Y587 ISCA1P3-201ENST00000577104 373 ntBASIC2.27□□□□□ -2.05
AP4S1Q9Y587 MIR5694-201ENST00000581190 76 ntBASIC2.27□□□□□ -2.05
AP4S1Q9Y587 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC2.27□□□□□ -2.05
AP4S1Q9Y587 AC067747.1-201ENST00000608026 250 ntBASIC2.27□□□□□ -2.05
AP4S1Q9Y587 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC2.27□□□□□ -2.05
AP4S1Q9Y587 U4.3-201ENST00000621047 82 ntBASIC2.27□□□□□ -2.05
AP4S1Q9Y587 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
AP4S1Q9Y587 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
AP4S1Q9Y587 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
AP4S1Q9Y587 RNU6-1331P-201ENST00000363658 106 ntBASIC2.26□□□□□ -2.05
AP4S1Q9Y587 SNORA7.2-201ENST00000364446 145 ntBASIC2.26□□□□□ -2.05
AP4S1Q9Y587 SNORD114-30-201ENST00000364448 72 ntBASIC2.26□□□□□ -2.05
AP4S1Q9Y587 SNORA62.3-201ENST00000365110 153 ntBASIC2.26□□□□□ -2.05
AP4S1Q9Y587 RNU6-301P-201ENST00000384277 107 ntBASIC2.26□□□□□ -2.05
AP4S1Q9Y587 MIR449B-201ENST00000384995 97 ntBASIC2.26□□□□□ -2.05
AP4S1Q9Y587 AC025750.1-201ENST00000399891 379 ntBASIC2.26□□□□□ -2.05
AP4S1Q9Y587 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC2.26□□□□□ -2.05
AP4S1Q9Y587 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC2.26□□□□□ -2.05
AP4S1Q9Y587 AC104435.1-201ENST00000483483 166 ntBASIC2.26□□□□□ -2.05
AP4S1Q9Y587 AC006063.1-201ENST00000512511 560 ntTSL 4 BASIC2.26□□□□□ -2.05
AP4S1Q9Y587 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC2.26□□□□□ -2.05
AP4S1Q9Y587 AP000889.2-201ENST00000532684 490 ntBASIC2.26□□□□□ -2.05
AP4S1Q9Y587 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC2.26□□□□□ -2.05
AP4S1Q9Y587 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC2.26□□□□□ -2.05
AP4S1Q9Y587 AC100844.1-201ENST00000580622 440 ntTSL 5 BASIC2.26□□□□□ -2.05
AP4S1Q9Y587 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC2.26□□□□□ -2.05
AP4S1Q9Y587 AC073387.2-201ENST00000604797 784 ntBASIC2.26□□□□□ -2.05
AP4S1Q9Y587 AC140725.3-201ENST00000616193 880 ntBASIC2.26□□□□□ -2.05
AP4S1Q9Y587 AC091046.2-201ENST00000620775 665 ntBASIC2.26□□□□□ -2.05
AP4S1Q9Y587 AL161637.1-201ENST00000622380 412 ntBASIC2.26□□□□□ -2.05
AP4S1Q9Y587 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
AP4S1Q9Y587 AC073055.1-201ENST00000456901 1621 ntBASIC2.26□□□□□ -2.05
AP4S1Q9Y587 AL049780.3-201ENST00000624612 1583 ntBASIC2.26□□□□□ -2.05
AP4S1Q9Y587 MTND5P3-201ENST00000438536 1800 ntBASIC2.26□□□□□ -2.05
AP4S1Q9Y587 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC2.26□□□□□ -2.05
AP4S1Q9Y587 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
AP4S1Q9Y587 AC244517.1-201ENST00000606030 2086 ntBASIC2.26□□□□□ -2.05
AP4S1Q9Y587 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC2.25□□□□□ -2.05
AP4S1Q9Y587 SNORA51.2-201ENST00000364595 132 ntBASIC2.25□□□□□ -2.05
AP4S1Q9Y587 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC2.25□□□□□ -2.05
AP4S1Q9Y587 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC2.25□□□□□ -2.05
AP4S1Q9Y587 RNVU1-14-201ENST00000384770 164 ntBASIC2.25□□□□□ -2.05
AP4S1Q9Y587 RN7SKP222-201ENST00000410651 315 ntBASIC2.25□□□□□ -2.05
AP4S1Q9Y587 RAB28P1-201ENST00000411517 641 ntBASIC2.25□□□□□ -2.05
AP4S1Q9Y587 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC2.25□□□□□ -2.05
AP4S1Q9Y587 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC2.25□□□□□ -2.05
AP4S1Q9Y587 MORF4L1P7-201ENST00000426038 703 ntBASIC2.25□□□□□ -2.05
AP4S1Q9Y587 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC2.25□□□□□ -2.05
AP4S1Q9Y587 RPS24P13-201ENST00000442520 397 ntBASIC2.25□□□□□ -2.05
AP4S1Q9Y587 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC2.25□□□□□ -2.05
AP4S1Q9Y587 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC2.25□□□□□ -2.05
AP4S1Q9Y587 AC104472.2-201ENST00000469035 601 ntBASIC2.25□□□□□ -2.05
AP4S1Q9Y587 AC068587.1-201ENST00000483613 781 ntBASIC2.25□□□□□ -2.05
AP4S1Q9Y587 AC090255.1-201ENST00000495779 349 ntBASIC2.25□□□□□ -2.05
AP4S1Q9Y587 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC2.25□□□□□ -2.05
AP4S1Q9Y587 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC2.25□□□□□ -2.05
AP4S1Q9Y587 AC096725.1-201ENST00000514266 313 ntBASIC2.25□□□□□ -2.05
AP4S1Q9Y587 CCNG2P1-201ENST00000549521 1000 ntBASIC2.25□□□□□ -2.05
AP4S1Q9Y587 CKS1BP1-201ENST00000555221 240 ntBASIC2.25□□□□□ -2.05
AP4S1Q9Y587 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.25□□□□□ -2.05
AP4S1Q9Y587 AC034102.8-201ENST00000615146 484 ntBASIC2.25□□□□□ -2.05
AP4S1Q9Y587 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC2.25□□□□□ -2.05
AP4S1Q9Y587 AC069528.2-201ENST00000624849 1991 ntBASIC2.25□□□□□ -2.05
AP4S1Q9Y587 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC2.25□□□□□ -2.05
AP4S1Q9Y587 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
AP4S1Q9Y587 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.24□□□□□ -2.05
AP4S1Q9Y587 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC2.24□□□□□ -2.05
AP4S1Q9Y587 RNA5SP72-201ENST00000364442 117 ntBASIC2.24□□□□□ -2.05
AP4S1Q9Y587 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC2.24□□□□□ -2.05
AP4S1Q9Y587 C1orf146-201ENST00000370373 871 ntTSL 5 BASIC2.24□□□□□ -2.05
AP4S1Q9Y587 RNU6-356P-201ENST00000384140 107 ntBASIC2.24□□□□□ -2.05
AP4S1Q9Y587 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC2.24□□□□□ -2.05
AP4S1Q9Y587 MIR1289-1-201ENST00000408836 144 ntBASIC2.24□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 81.9 ms