Protein–RNA interactions for Protein: Q9UJQ4

SALL4, Sal-like protein 4, humanhuman

Predictions only

Length 1,053 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SALL4Q9UJQ4 RPL21P89-201ENST00000444021 467 ntBASIC5.71□□□□□ -1.5
SALL4Q9UJQ4 RPL23AP43-201ENST00000446445 471 ntBASIC5.71□□□□□ -1.5
SALL4Q9UJQ4 AL118520.1-201ENST00000450770 291 ntBASIC5.71□□□□□ -1.5
SALL4Q9UJQ4 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC5.71□□□□□ -1.5
SALL4Q9UJQ4 AC245028.2-201ENST00000458673 253 ntBASIC5.71□□□□□ -1.5
SALL4Q9UJQ4 RNU7-66P-201ENST00000459469 62 ntBASIC5.71□□□□□ -1.5
SALL4Q9UJQ4 AC108161.1-201ENST00000461060 402 ntBASIC5.71□□□□□ -1.5
SALL4Q9UJQ4 SIAH1P1-201ENST00000479411 923 ntBASIC5.71□□□□□ -1.5
SALL4Q9UJQ4 AC106872.2-201ENST00000494303 480 ntBASIC5.71□□□□□ -1.5
SALL4Q9UJQ4 AC025164.1-201ENST00000496249 478 ntBASIC5.71□□□□□ -1.5
SALL4Q9UJQ4 Y_RNA.654-201ENST00000497848 106 ntBASIC5.71□□□□□ -1.5
SALL4Q9UJQ4 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC5.71□□□□□ -1.5
SALL4Q9UJQ4 AC126768.1-201ENST00000511698 490 ntTSL 3 BASIC5.71□□□□□ -1.5
SALL4Q9UJQ4 COPS8P3-201ENST00000526024 482 ntBASIC5.71□□□□□ -1.5
SALL4Q9UJQ4 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC5.71□□□□□ -1.5
SALL4Q9UJQ4 AL049872.1-201ENST00000556323 322 ntBASIC5.71□□□□□ -1.5
SALL4Q9UJQ4 AC004817.2-201ENST00000561794 651 ntBASIC5.71□□□□□ -1.5
SALL4Q9UJQ4 MIR4790-201ENST00000577799 79 ntBASIC5.71□□□□□ -1.5
SALL4Q9UJQ4 RN7SL802P-201ENST00000577858 299 ntBASIC5.71□□□□□ -1.5
SALL4Q9UJQ4 MIR4503-201ENST00000582187 83 ntBASIC5.71□□□□□ -1.5
SALL4Q9UJQ4 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC5.71□□□□□ -1.5
SALL4Q9UJQ4 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC5.71□□□□□ -1.5
SALL4Q9UJQ4 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC5.71□□□□□ -1.5
SALL4Q9UJQ4 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC5.71□□□□□ -1.5
SALL4Q9UJQ4 RMST_9.1-201ENST00000619945 193 ntBASIC5.71□□□□□ -1.5
SALL4Q9UJQ4 AC119674.1-207ENST00000641355 633 ntBASIC5.71□□□□□ -1.5
SALL4Q9UJQ4 OR52H1-202ENST00000641796 1061 ntBASIC5.71□□□□□ -1.5
SALL4Q9UJQ4 HELZ-207ENST00000580168 6279 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
SALL4Q9UJQ4 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
SALL4Q9UJQ4 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
SALL4Q9UJQ4 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
SALL4Q9UJQ4 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC5.71□□□□□ -1.5
SALL4Q9UJQ4 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.5
SALL4Q9UJQ4 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC5.71□□□□□ -1.5
SALL4Q9UJQ4 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
SALL4Q9UJQ4 AC235565.1-201ENST00000456962 1325 ntBASIC5.71□□□□□ -1.5
SALL4Q9UJQ4 MPHOSPH9-220ENST00000606320 6351 ntAPPRIS P2 TSL 5 BASIC5.71□□□□□ -1.5
SALL4Q9UJQ4 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
SALL4Q9UJQ4 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
SALL4Q9UJQ4 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
SALL4Q9UJQ4 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC5.7□□□□□ -1.5
SALL4Q9UJQ4 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC5.7□□□□□ -1.5
SALL4Q9UJQ4 MPDZ-219ENST00000546205 6342 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
SALL4Q9UJQ4 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
SALL4Q9UJQ4 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
SALL4Q9UJQ4 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC5.7□□□□□ -1.5
SALL4Q9UJQ4 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
SALL4Q9UJQ4 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
SALL4Q9UJQ4 Y_RNA.378-201ENST00000365652 113 ntBASIC5.7□□□□□ -1.5
SALL4Q9UJQ4 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
SALL4Q9UJQ4 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC5.7□□□□□ -1.5
SALL4Q9UJQ4 AL133173.1-201ENST00000423458 397 ntBASIC5.7□□□□□ -1.5
SALL4Q9UJQ4 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC5.7□□□□□ -1.5
SALL4Q9UJQ4 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC5.7□□□□□ -1.5
SALL4Q9UJQ4 SNRPEP4-201ENST00000435815 279 ntBASIC5.7□□□□□ -1.5
SALL4Q9UJQ4 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC5.7□□□□□ -1.5
SALL4Q9UJQ4 AL137792.2-201ENST00000443484 235 ntBASIC5.7□□□□□ -1.5
SALL4Q9UJQ4 AL163193.1-201ENST00000444895 788 ntBASIC5.7□□□□□ -1.5
SALL4Q9UJQ4 AC079804.1-201ENST00000461922 436 ntBASIC5.7□□□□□ -1.5
SALL4Q9UJQ4 AC058823.1-201ENST00000485315 474 ntBASIC5.7□□□□□ -1.5
SALL4Q9UJQ4 AL139099.1-201ENST00000497398 403 ntBASIC5.7□□□□□ -1.5
SALL4Q9UJQ4 ENPP7P11-201ENST00000505915 627 ntBASIC5.7□□□□□ -1.5
SALL4Q9UJQ4 AC098591.2-201ENST00000510152 315 ntBASIC5.7□□□□□ -1.5
SALL4Q9UJQ4 AP004607.2-201ENST00000533949 322 ntBASIC5.7□□□□□ -1.5
SALL4Q9UJQ4 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC5.7□□□□□ -1.5
SALL4Q9UJQ4 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC5.7□□□□□ -1.5
SALL4Q9UJQ4 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC5.7□□□□□ -1.5
SALL4Q9UJQ4 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC5.7□□□□□ -1.5
SALL4Q9UJQ4 AL118558.2-201ENST00000556294 238 ntBASIC5.7□□□□□ -1.5
SALL4Q9UJQ4 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC5.7□□□□□ -1.5
SALL4Q9UJQ4 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC5.7□□□□□ -1.5
SALL4Q9UJQ4 MIR3149-201ENST00000584629 83 ntBASIC5.7□□□□□ -1.5
SALL4Q9UJQ4 NF1P5-201ENST00000588287 448 ntBASIC5.7□□□□□ -1.5
SALL4Q9UJQ4 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC5.7□□□□□ -1.5
SALL4Q9UJQ4 AC005191.1-201ENST00000603950 358 ntBASIC5.7□□□□□ -1.5
SALL4Q9UJQ4 SUMO2P15-201ENST00000604285 278 ntBASIC5.7□□□□□ -1.5
SALL4Q9UJQ4 AC023813.4-201ENST00000607580 580 ntBASIC5.7□□□□□ -1.5
SALL4Q9UJQ4 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC5.7□□□□□ -1.5
SALL4Q9UJQ4 AL118522.2-201ENST00000616045 615 ntBASIC5.7□□□□□ -1.5
SALL4Q9UJQ4 AC087588.2-201ENST00000617667 426 ntBASIC5.7□□□□□ -1.5
SALL4Q9UJQ4 HOTTIP_3.1-201ENST00000619957 337 ntBASIC5.7□□□□□ -1.5
SALL4Q9UJQ4 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC5.7□□□□□ -1.5
SALL4Q9UJQ4 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
SALL4Q9UJQ4 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
SALL4Q9UJQ4 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
SALL4Q9UJQ4 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
SALL4Q9UJQ4 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
SALL4Q9UJQ4 AL445437.1-201ENST00000623157 3087 ntBASIC5.69□□□□□ -1.5
SALL4Q9UJQ4 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC5.69□□□□□ -1.5
SALL4Q9UJQ4 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC5.69□□□□□ -1.5
SALL4Q9UJQ4 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
SALL4Q9UJQ4 AC097461.1-201ENST00000568928 2821 ntBASIC5.69□□□□□ -1.5
SALL4Q9UJQ4 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
SALL4Q9UJQ4 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
SALL4Q9UJQ4 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC5.69□□□□□ -1.5
SALL4Q9UJQ4 RNU6-179P-201ENST00000363350 107 ntBASIC5.69□□□□□ -1.5
SALL4Q9UJQ4 RNU1-130P-201ENST00000363930 160 ntBASIC5.69□□□□□ -1.5
SALL4Q9UJQ4 RNU6-1243P-201ENST00000364028 107 ntBASIC5.69□□□□□ -1.5
SALL4Q9UJQ4 PARD3-204ENST00000374768 799 ntTSL 3 BASIC5.69□□□□□ -1.5
SALL4Q9UJQ4 MIR551A-201ENST00000385042 96 ntBASIC5.69□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 101.4 ms