Protein–RNA interactions for Protein: Q9H0F5

RNF38, E3 ubiquitin-protein ligase RNF38, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38Q9H0F5 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC5.15□□□□□ -1.59
RNF38Q9H0F5 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC5.15□□□□□ -1.59
RNF38Q9H0F5 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC5.15□□□□□ -1.59
RNF38Q9H0F5 ANKRD62P1-201ENST00000434304 1623 ntBASIC5.15□□□□□ -1.59
RNF38Q9H0F5 AC083843.3-201ENST00000623679 2186 ntBASIC5.15□□□□□ -1.59
RNF38Q9H0F5 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
RNF38Q9H0F5 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.59
RNF38Q9H0F5 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC5.15□□□□□ -1.59
RNF38Q9H0F5 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC5.15□□□□□ -1.59
RNF38Q9H0F5 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
RNF38Q9H0F5 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
RNF38Q9H0F5 AP002907.1-201ENST00000606361 1430 ntBASIC5.14□□□□□ -1.59
RNF38Q9H0F5 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
RNF38Q9H0F5 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
RNF38Q9H0F5 CKAP2P1-201ENST00000555477 2049 ntBASIC5.14□□□□□ -1.59
RNF38Q9H0F5 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC5.14□□□□□ -1.59
RNF38Q9H0F5 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.59
RNF38Q9H0F5 SAGE2P-201ENST00000420011 2126 ntBASIC5.14□□□□□ -1.59
RNF38Q9H0F5 ZNF33BP1-201ENST00000452497 1834 ntBASIC5.14□□□□□ -1.59
RNF38Q9H0F5 Y_RNA.157-201ENST00000363638 102 ntBASIC5.14□□□□□ -1.59
RNF38Q9H0F5 Y_RNA.166-201ENST00000363730 102 ntBASIC5.14□□□□□ -1.59
RNF38Q9H0F5 RNU6-1243P-201ENST00000364028 107 ntBASIC5.14□□□□□ -1.59
RNF38Q9H0F5 SNORA51.2-201ENST00000364595 132 ntBASIC5.14□□□□□ -1.59
RNF38Q9H0F5 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
RNF38Q9H0F5 RNU1-39P-201ENST00000383897 165 ntBASIC5.14□□□□□ -1.59
RNF38Q9H0F5 AL023807.1-201ENST00000407932 359 ntBASIC5.14□□□□□ -1.59
RNF38Q9H0F5 AC069218.2-201ENST00000411665 344 ntBASIC5.14□□□□□ -1.59
RNF38Q9H0F5 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC5.14□□□□□ -1.59
RNF38Q9H0F5 MRPL50P2-201ENST00000416821 482 ntBASIC5.14□□□□□ -1.59
RNF38Q9H0F5 MTATP6P18-201ENST00000417994 673 ntBASIC5.14□□□□□ -1.59
RNF38Q9H0F5 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC5.14□□□□□ -1.59
RNF38Q9H0F5 OR51AB1P-201ENST00000429046 620 ntBASIC5.14□□□□□ -1.59
RNF38Q9H0F5 AL606489.2-201ENST00000433886 234 ntBASIC5.14□□□□□ -1.59
RNF38Q9H0F5 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC5.14□□□□□ -1.59
RNF38Q9H0F5 BNIP3P2-201ENST00000441221 577 ntBASIC5.14□□□□□ -1.59
RNF38Q9H0F5 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC5.14□□□□□ -1.59
RNF38Q9H0F5 H2AFZP6-201ENST00000444403 394 ntBASIC5.14□□□□□ -1.59
RNF38Q9H0F5 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC5.14□□□□□ -1.59
RNF38Q9H0F5 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC5.14□□□□□ -1.59
RNF38Q9H0F5 AL691482.1-201ENST00000453255 87 ntBASIC5.14□□□□□ -1.59
RNF38Q9H0F5 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC5.14□□□□□ -1.59
RNF38Q9H0F5 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC5.14□□□□□ -1.59
RNF38Q9H0F5 AC103851.1-201ENST00000506833 274 ntBASIC5.14□□□□□ -1.59
RNF38Q9H0F5 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC5.14□□□□□ -1.59
RNF38Q9H0F5 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC5.14□□□□□ -1.59
RNF38Q9H0F5 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC5.14□□□□□ -1.59
RNF38Q9H0F5 AP005597.4-201ENST00000526762 229 ntBASIC5.14□□□□□ -1.59
RNF38Q9H0F5 ZNF705CP-201ENST00000530515 889 ntBASIC5.14□□□□□ -1.59
RNF38Q9H0F5 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC5.14□□□□□ -1.59
RNF38Q9H0F5 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC5.14□□□□□ -1.59
RNF38Q9H0F5 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC5.14□□□□□ -1.59
RNF38Q9H0F5 TVP23CP2-201ENST00000571473 623 ntBASIC5.14□□□□□ -1.59
RNF38Q9H0F5 MIR3667-201ENST00000581025 74 ntBASIC5.14□□□□□ -1.59
RNF38Q9H0F5 MIR4270-201ENST00000581799 70 ntBASIC5.14□□□□□ -1.59
RNF38Q9H0F5 MAGOH2P-202ENST00000584384 429 ntBASIC5.14□□□□□ -1.59
RNF38Q9H0F5 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC5.14□□□□□ -1.59
RNF38Q9H0F5 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC5.14□□□□□ -1.59
RNF38Q9H0F5 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC5.14□□□□□ -1.59
RNF38Q9H0F5 ADAM5-202ENST00000399789 1942 ntBASIC5.14□□□□□ -1.59
RNF38Q9H0F5 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC5.14□□□□□ -1.59
RNF38Q9H0F5 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
RNF38Q9H0F5 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC5.14□□□□□ -1.59
RNF38Q9H0F5 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
RNF38Q9H0F5 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
RNF38Q9H0F5 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC5.14□□□□□ -1.59
RNF38Q9H0F5 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC5.13□□□□□ -1.59
RNF38Q9H0F5 ASNSP1-201ENST00000518311 1939 ntBASIC5.13□□□□□ -1.59
RNF38Q9H0F5 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC5.13□□□□□ -1.59
RNF38Q9H0F5 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
RNF38Q9H0F5 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC5.13□□□□□ -1.59
RNF38Q9H0F5 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC5.13□□□□□ -1.59
RNF38Q9H0F5 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
RNF38Q9H0F5 SDAD1P1-202ENST00000524156 2051 ntBASIC5.13□□□□□ -1.59
RNF38Q9H0F5 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC5.13□□□□□ -1.59
RNF38Q9H0F5 Y_RNA.46-201ENST00000362695 102 ntBASIC5.13□□□□□ -1.59
RNF38Q9H0F5 MRPL42P2-201ENST00000403169 426 ntBASIC5.13□□□□□ -1.59
RNF38Q9H0F5 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC5.13□□□□□ -1.59
RNF38Q9H0F5 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC5.13□□□□□ -1.59
RNF38Q9H0F5 RPL35AP12-201ENST00000425362 338 ntBASIC5.13□□□□□ -1.59
RNF38Q9H0F5 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC5.13□□□□□ -1.59
RNF38Q9H0F5 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC5.13□□□□□ -1.59
RNF38Q9H0F5 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC5.13□□□□□ -1.59
RNF38Q9H0F5 HMGB3P21-201ENST00000452483 547 ntBASIC5.13□□□□□ -1.59
RNF38Q9H0F5 AURKAPS2-201ENST00000454983 333 ntBASIC5.13□□□□□ -1.59
RNF38Q9H0F5 RPS17P2-201ENST00000461663 408 ntBASIC5.13□□□□□ -1.59
RNF38Q9H0F5 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC5.13□□□□□ -1.59
RNF38Q9H0F5 RPS20P21-201ENST00000466859 343 ntBASIC5.13□□□□□ -1.59
RNF38Q9H0F5 RPS15AP17-201ENST00000470598 390 ntBASIC5.13□□□□□ -1.59
RNF38Q9H0F5 AC083798.1-201ENST00000472671 131 ntBASIC5.13□□□□□ -1.59
RNF38Q9H0F5 AC008897.1-201ENST00000494006 347 ntBASIC5.13□□□□□ -1.59
RNF38Q9H0F5 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC5.13□□□□□ -1.59
RNF38Q9H0F5 TMEM251P1-201ENST00000503717 318 ntBASIC5.13□□□□□ -1.59
RNF38Q9H0F5 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC5.13□□□□□ -1.59
RNF38Q9H0F5 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC5.13□□□□□ -1.59
RNF38Q9H0F5 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC5.13□□□□□ -1.59
RNF38Q9H0F5 RNA5SP401-201ENST00000515920 127 ntBASIC5.13□□□□□ -1.59
RNF38Q9H0F5 SNORD116-26-201ENST00000516006 96 ntBASIC5.13□□□□□ -1.59
RNF38Q9H0F5 RNU6-277P-201ENST00000516272 106 ntBASIC5.13□□□□□ -1.59
RNF38Q9H0F5 RNU7-30P-201ENST00000516835 62 ntBASIC5.13□□□□□ -1.59
RNF38Q9H0F5 RNU6-835P-201ENST00000516974 104 ntBASIC5.13□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 114.3 ms