Protein–RNA interactions for Protein: Q9C0C9

UBE2O, (E3-independent) E2 ubiquitin-conjugating enzyme, humanhuman

Known RBP Predictions only

Length 1,292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2OQ9C0C9 TPK1-207ENST00000538212 2243 ntTSL 2 BASIC5.99□□□□□ -1.45
UBE2OQ9C0C9 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
UBE2OQ9C0C9 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
UBE2OQ9C0C9 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC5.99□□□□□ -1.45
UBE2OQ9C0C9 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC5.99□□□□□ -1.45
UBE2OQ9C0C9 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC5.99□□□□□ -1.45
UBE2OQ9C0C9 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
UBE2OQ9C0C9 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
UBE2OQ9C0C9 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
UBE2OQ9C0C9 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
UBE2OQ9C0C9 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
UBE2OQ9C0C9 Y_RNA.5-201ENST00000362334 102 ntBASIC5.98□□□□□ -1.45
UBE2OQ9C0C9 RNU6-552P-201ENST00000362869 119 ntBASIC5.98□□□□□ -1.45
UBE2OQ9C0C9 RNA5SP505-201ENST00000364748 108 ntBASIC5.98□□□□□ -1.45
UBE2OQ9C0C9 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
UBE2OQ9C0C9 RNU6-921P-201ENST00000384361 107 ntBASIC5.98□□□□□ -1.45
UBE2OQ9C0C9 MIR130A-201ENST00000385274 89 ntBASIC5.98□□□□□ -1.45
UBE2OQ9C0C9 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
UBE2OQ9C0C9 RNU2-3P-201ENST00000410144 191 ntBASIC5.98□□□□□ -1.45
UBE2OQ9C0C9 RNU2-50P-201ENST00000410494 143 ntBASIC5.98□□□□□ -1.45
UBE2OQ9C0C9 RNU4-61P-201ENST00000411243 107 ntBASIC5.98□□□□□ -1.45
UBE2OQ9C0C9 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC5.98□□□□□ -1.45
UBE2OQ9C0C9 AC119751.6-201ENST00000416712 186 ntBASIC5.98□□□□□ -1.45
UBE2OQ9C0C9 MCFD2P1-201ENST00000417812 300 ntBASIC5.98□□□□□ -1.45
UBE2OQ9C0C9 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC5.98□□□□□ -1.45
UBE2OQ9C0C9 AC137499.1-201ENST00000427602 88 ntBASIC5.98□□□□□ -1.45
UBE2OQ9C0C9 BX276092.6-201ENST00000430476 250 ntBASIC5.98□□□□□ -1.45
UBE2OQ9C0C9 OR4K11P-201ENST00000431829 904 ntBASIC5.98□□□□□ -1.45
UBE2OQ9C0C9 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC5.98□□□□□ -1.45
UBE2OQ9C0C9 ZDHHC20P1-204ENST00000435787 423 ntBASIC5.98□□□□□ -1.45
UBE2OQ9C0C9 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC5.98□□□□□ -1.45
UBE2OQ9C0C9 TXNP1-201ENST00000441872 371 ntBASIC5.98□□□□□ -1.45
UBE2OQ9C0C9 BX276092.8-201ENST00000455722 250 ntBASIC5.98□□□□□ -1.45
UBE2OQ9C0C9 RPL7L1P8-201ENST00000469911 741 ntBASIC5.98□□□□□ -1.45
UBE2OQ9C0C9 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC5.98□□□□□ -1.45
UBE2OQ9C0C9 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC5.98□□□□□ -1.45
UBE2OQ9C0C9 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC5.98□□□□□ -1.45
UBE2OQ9C0C9 RNU6-976P-201ENST00000516086 111 ntBASIC5.98□□□□□ -1.45
UBE2OQ9C0C9 HMGB1P19-201ENST00000517578 577 ntBASIC5.98□□□□□ -1.45
UBE2OQ9C0C9 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC5.98□□□□□ -1.45
UBE2OQ9C0C9 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
UBE2OQ9C0C9 AC103843.2-201ENST00000530523 682 ntBASIC5.98□□□□□ -1.45
UBE2OQ9C0C9 AP000907.2-201ENST00000530827 353 ntBASIC5.98□□□□□ -1.45
UBE2OQ9C0C9 AC024940.3-201ENST00000538551 316 ntBASIC5.98□□□□□ -1.45
UBE2OQ9C0C9 IMMP1LP2-201ENST00000552954 492 ntBASIC5.98□□□□□ -1.45
UBE2OQ9C0C9 AL118558.2-201ENST00000556294 238 ntBASIC5.98□□□□□ -1.45
UBE2OQ9C0C9 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC5.98□□□□□ -1.45
UBE2OQ9C0C9 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC5.98□□□□□ -1.45
UBE2OQ9C0C9 MYL12BP1-201ENST00000569826 507 ntBASIC5.98□□□□□ -1.45
UBE2OQ9C0C9 TVP23CP2-201ENST00000571473 623 ntBASIC5.98□□□□□ -1.45
UBE2OQ9C0C9 AC136624.4-201ENST00000573044 370 ntBASIC5.98□□□□□ -1.45
UBE2OQ9C0C9 OR4K8P-201ENST00000578842 1048 ntBASIC5.98□□□□□ -1.45
UBE2OQ9C0C9 MIR4311-201ENST00000580794 100 ntBASIC5.98□□□□□ -1.45
UBE2OQ9C0C9 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC5.98□□□□□ -1.45
UBE2OQ9C0C9 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC5.98□□□□□ -1.45
UBE2OQ9C0C9 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
UBE2OQ9C0C9 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
UBE2OQ9C0C9 AC239868.2-201ENST00000564237 4527 ntBASIC5.98□□□□□ -1.45
UBE2OQ9C0C9 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
UBE2OQ9C0C9 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC5.98□□□□□ -1.45
UBE2OQ9C0C9 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
UBE2OQ9C0C9 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
UBE2OQ9C0C9 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
UBE2OQ9C0C9 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
UBE2OQ9C0C9 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC5.98□□□□□ -1.45
UBE2OQ9C0C9 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC5.97□□□□□ -1.45
UBE2OQ9C0C9 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC5.97□□□□□ -1.45
UBE2OQ9C0C9 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
UBE2OQ9C0C9 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC5.97□□□□□ -1.45
UBE2OQ9C0C9 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC5.97□□□□□ -1.45
UBE2OQ9C0C9 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC5.97□□□□□ -1.45
UBE2OQ9C0C9 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC5.97□□□□□ -1.45
UBE2OQ9C0C9 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC5.97□□□□□ -1.45
UBE2OQ9C0C9 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
UBE2OQ9C0C9 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
UBE2OQ9C0C9 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
UBE2OQ9C0C9 RNU6-1115P-201ENST00000362490 106 ntBASIC5.97□□□□□ -1.45
UBE2OQ9C0C9 Y_RNA.22-201ENST00000362492 102 ntBASIC5.97□□□□□ -1.45
UBE2OQ9C0C9 SNORA16A-201ENST00000384342 137 ntBASIC5.97□□□□□ -1.45
UBE2OQ9C0C9 SNORD3H-201ENST00000384486 214 ntBASIC5.97□□□□□ -1.45
UBE2OQ9C0C9 RNU6-903P-201ENST00000391270 109 ntBASIC5.97□□□□□ -1.45
UBE2OQ9C0C9 AC017078.1-201ENST00000416146 368 ntBASIC5.97□□□□□ -1.45
UBE2OQ9C0C9 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC5.97□□□□□ -1.45
UBE2OQ9C0C9 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC5.97□□□□□ -1.45
UBE2OQ9C0C9 AL031663.1-201ENST00000437445 219 ntBASIC5.97□□□□□ -1.45
UBE2OQ9C0C9 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC5.97□□□□□ -1.45
UBE2OQ9C0C9 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC5.97□□□□□ -1.45
UBE2OQ9C0C9 RPL30P15-201ENST00000457129 321 ntBASIC5.97□□□□□ -1.45
UBE2OQ9C0C9 RPL23AP11-201ENST00000475260 469 ntBASIC5.97□□□□□ -1.45
UBE2OQ9C0C9 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC5.97□□□□□ -1.45
UBE2OQ9C0C9 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC5.97□□□□□ -1.45
UBE2OQ9C0C9 DUTP1-201ENST00000493631 470 ntBASIC5.97□□□□□ -1.45
UBE2OQ9C0C9 RPS4XP20-201ENST00000505751 772 ntBASIC5.97□□□□□ -1.45
UBE2OQ9C0C9 OR7H2P-201ENST00000513483 306 ntBASIC5.97□□□□□ -1.45
UBE2OQ9C0C9 RNU6-273P-201ENST00000516937 96 ntBASIC5.97□□□□□ -1.45
UBE2OQ9C0C9 AP005902.1-201ENST00000521358 186 ntBASIC5.97□□□□□ -1.45
UBE2OQ9C0C9 AP002404.1-201ENST00000532005 451 ntBASIC5.97□□□□□ -1.45
UBE2OQ9C0C9 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
UBE2OQ9C0C9 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC5.97□□□□□ -1.45
UBE2OQ9C0C9 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 104.6 ms