Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 AL359535.1-201ENST00000612100 1087 ntBASIC3.45□□□□□ -1.86
UPF3BQ9BZI7 ATP5A1P2-202ENST00000616464 443 ntBASIC3.45□□□□□ -1.86
UPF3BQ9BZI7 AC010149.2-201ENST00000637608 315 ntBASIC3.45□□□□□ -1.86
UPF3BQ9BZI7 AC108206.1-201ENST00000570186 4159 ntBASIC3.45□□□□□ -1.86
UPF3BQ9BZI7 AC011978.2-201ENST00000569835 2054 ntBASIC3.45□□□□□ -1.86
UPF3BQ9BZI7 FAM35CP-201ENST00000554755 2470 ntBASIC3.45□□□□□ -1.86
UPF3BQ9BZI7 AL161431.1-201ENST00000618966 4205 ntBASIC3.45□□□□□ -1.86
UPF3BQ9BZI7 SAGE4P-201ENST00000442271 3381 ntBASIC3.45□□□□□ -1.86
UPF3BQ9BZI7 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
UPF3BQ9BZI7 AC000403.1-201ENST00000613696 3585 ntBASIC3.44□□□□□ -1.86
UPF3BQ9BZI7 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC3.44□□□□□ -1.86
UPF3BQ9BZI7 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC3.44□□□□□ -1.86
UPF3BQ9BZI7 DNAJC19P6-201ENST00000401853 280 ntBASIC3.44□□□□□ -1.86
UPF3BQ9BZI7 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC3.44□□□□□ -1.86
UPF3BQ9BZI7 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC3.44□□□□□ -1.86
UPF3BQ9BZI7 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC3.44□□□□□ -1.86
UPF3BQ9BZI7 MTCO1P43-201ENST00000431831 488 ntBASIC3.44□□□□□ -1.86
UPF3BQ9BZI7 AL606490.7-201ENST00000433136 191 ntBASIC3.44□□□□□ -1.86
UPF3BQ9BZI7 AL121890.1-201ENST00000435457 205 ntBASIC3.44□□□□□ -1.86
UPF3BQ9BZI7 HMGB1P45-201ENST00000435986 653 ntBASIC3.44□□□□□ -1.86
UPF3BQ9BZI7 RPL23AP33-201ENST00000442301 452 ntBASIC3.44□□□□□ -1.86
UPF3BQ9BZI7 RPL34P26-201ENST00000445636 354 ntBASIC3.44□□□□□ -1.86
UPF3BQ9BZI7 NECAP1P2-201ENST00000455668 727 ntBASIC3.44□□□□□ -1.86
UPF3BQ9BZI7 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC3.44□□□□□ -1.86
UPF3BQ9BZI7 RPL21P18-201ENST00000469899 480 ntBASIC3.44□□□□□ -1.86
UPF3BQ9BZI7 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.44□□□□□ -1.86
UPF3BQ9BZI7 AC068724.1-201ENST00000487100 792 ntBASIC3.44□□□□□ -1.86
UPF3BQ9BZI7 IGKV2-36-201ENST00000519999 223 ntBASIC3.44□□□□□ -1.86
UPF3BQ9BZI7 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC3.44□□□□□ -1.86
UPF3BQ9BZI7 AL049874.4-201ENST00000557593 255 ntBASIC3.44□□□□□ -1.86
UPF3BQ9BZI7 AC010735.1-201ENST00000567305 1026 ntBASIC3.44□□□□□ -1.86
UPF3BQ9BZI7 AC090616.5-202ENST00000582111 297 ntBASIC3.44□□□□□ -1.86
UPF3BQ9BZI7 AC138473.1-201ENST00000605717 526 ntBASIC3.44□□□□□ -1.86
UPF3BQ9BZI7 AL355493.4-201ENST00000618530 292 ntBASIC3.44□□□□□ -1.86
UPF3BQ9BZI7 IGHVIII-44-202ENST00000636235 289 ntBASIC3.44□□□□□ -1.86
UPF3BQ9BZI7 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
UPF3BQ9BZI7 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.43□□□□□ -1.86
UPF3BQ9BZI7 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
UPF3BQ9BZI7 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
UPF3BQ9BZI7 OR5J1P-201ENST00000313544 939 ntBASIC3.43□□□□□ -1.86
UPF3BQ9BZI7 RPL9P7-201ENST00000330965 580 ntBASIC3.43□□□□□ -1.86
UPF3BQ9BZI7 AL356806.1-201ENST00000422524 916 ntBASIC3.43□□□□□ -1.86
UPF3BQ9BZI7 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC3.43□□□□□ -1.86
UPF3BQ9BZI7 Z93242.1-201ENST00000427102 353 ntBASIC3.43□□□□□ -1.86
UPF3BQ9BZI7 AL035407.1-201ENST00000429211 571 ntBASIC3.43□□□□□ -1.86
UPF3BQ9BZI7 HMGN2P20-201ENST00000437531 273 ntBASIC3.43□□□□□ -1.86
UPF3BQ9BZI7 AC089999.1-201ENST00000460336 374 ntBASIC3.43□□□□□ -1.86
UPF3BQ9BZI7 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC3.43□□□□□ -1.86
UPF3BQ9BZI7 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
UPF3BQ9BZI7 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC3.43□□□□□ -1.86
UPF3BQ9BZI7 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC3.43□□□□□ -1.86
UPF3BQ9BZI7 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC3.43□□□□□ -1.86
UPF3BQ9BZI7 AL390838.2-201ENST00000602394 274 ntBASIC3.43□□□□□ -1.86
UPF3BQ9BZI7 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
UPF3BQ9BZI7 FAM157B-203ENST00000639350 358 ntBASIC3.43□□□□□ -1.86
UPF3BQ9BZI7 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC3.43□□□□□ -1.86
UPF3BQ9BZI7 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC3.43□□□□□ -1.86
UPF3BQ9BZI7 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.43□□□□□ -1.86
UPF3BQ9BZI7 ASNSP3-201ENST00000451989 1306 ntBASIC3.43□□□□□ -1.86
UPF3BQ9BZI7 AL136360.1-201ENST00000503377 1900 ntBASIC3.42□□□□□ -1.86
UPF3BQ9BZI7 GABRG2-229ENST00000641017 3628 ntBASIC3.42□□□□□ -1.86
UPF3BQ9BZI7 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC3.42□□□□□ -1.86
UPF3BQ9BZI7 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC3.42□□□□□ -1.86
UPF3BQ9BZI7 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
UPF3BQ9BZI7 RNU6-386P-201ENST00000362650 107 ntBASIC3.42□□□□□ -1.86
UPF3BQ9BZI7 AC241520.1-201ENST00000422654 1099 ntBASIC3.42□□□□□ -1.86
UPF3BQ9BZI7 HMGB1P12-201ENST00000438594 598 ntBASIC3.42□□□□□ -1.86
UPF3BQ9BZI7 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC3.42□□□□□ -1.86
UPF3BQ9BZI7 HSPE1P28-201ENST00000443139 211 ntBASIC3.42□□□□□ -1.86
UPF3BQ9BZI7 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC3.42□□□□□ -1.86
UPF3BQ9BZI7 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC3.42□□□□□ -1.86
UPF3BQ9BZI7 LINC01192-206ENST00000489012 818 ntTSL 5 BASIC3.42□□□□□ -1.86
UPF3BQ9BZI7 YWHAEP4-201ENST00000505390 198 ntBASIC3.42□□□□□ -1.86
UPF3BQ9BZI7 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC3.42□□□□□ -1.86
UPF3BQ9BZI7 RNA5SP385-201ENST00000515947 110 ntBASIC3.42□□□□□ -1.86
UPF3BQ9BZI7 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC3.42□□□□□ -1.86
UPF3BQ9BZI7 GTF3AP2-201ENST00000557014 266 ntBASIC3.42□□□□□ -1.86
UPF3BQ9BZI7 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC3.42□□□□□ -1.86
UPF3BQ9BZI7 AC006116.7-201ENST00000590141 756 ntBASIC3.42□□□□□ -1.86
UPF3BQ9BZI7 ZNF92P3-201ENST00000596594 954 ntBASIC3.42□□□□□ -1.86
UPF3BQ9BZI7 AC004832.5-201ENST00000608677 401 ntBASIC3.42□□□□□ -1.86
UPF3BQ9BZI7 XPOTP1-201ENST00000443317 2398 ntBASIC3.42□□□□□ -1.86
UPF3BQ9BZI7 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC3.42□□□□□ -1.86
UPF3BQ9BZI7 MTND5P7-201ENST00000413558 1798 ntBASIC3.42□□□□□ -1.86
UPF3BQ9BZI7 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.41□□□□□ -1.86
UPF3BQ9BZI7 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.41□□□□□ -1.86
UPF3BQ9BZI7 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
UPF3BQ9BZI7 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC3.41□□□□□ -1.86
UPF3BQ9BZI7 RNU2-21P-201ENST00000410368 188 ntBASIC3.41□□□□□ -1.86
UPF3BQ9BZI7 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC3.41□□□□□ -1.86
UPF3BQ9BZI7 RPL21P112-201ENST00000434403 463 ntBASIC3.41□□□□□ -1.86
UPF3BQ9BZI7 AL035706.1-201ENST00000439186 683 ntTSL 3 BASIC3.41□□□□□ -1.86
UPF3BQ9BZI7 AL353764.1-201ENST00000442072 474 ntTSL 2 BASIC3.41□□□□□ -1.86
UPF3BQ9BZI7 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC3.41□□□□□ -1.86
UPF3BQ9BZI7 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.41□□□□□ -1.86
UPF3BQ9BZI7 UBL5P3-201ENST00000475112 231 ntBASIC3.41□□□□□ -1.86
UPF3BQ9BZI7 RN7SL432P-201ENST00000484057 298 ntBASIC3.41□□□□□ -1.86
UPF3BQ9BZI7 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC3.41□□□□□ -1.86
UPF3BQ9BZI7 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC3.41□□□□□ -1.86
UPF3BQ9BZI7 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC3.41□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 100.4 ms