Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 AC108075.1-201ENST00000424692 529 ntBASIC4.47□□□□□ -1.69
SSBP3Q9BWW4 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC4.47□□□□□ -1.69
SSBP3Q9BWW4 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
SSBP3Q9BWW4 AC073465.2-201ENST00000440938 498 ntBASIC4.47□□□□□ -1.69
SSBP3Q9BWW4 AL035666.1-201ENST00000446195 348 ntBASIC4.47□□□□□ -1.69
SSBP3Q9BWW4 MRPS31P2-201ENST00000451581 518 ntBASIC4.47□□□□□ -1.69
SSBP3Q9BWW4 RN7SL799P-201ENST00000475891 298 ntBASIC4.47□□□□□ -1.69
SSBP3Q9BWW4 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC4.47□□□□□ -1.69
SSBP3Q9BWW4 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC4.47□□□□□ -1.69
SSBP3Q9BWW4 AC104136.1-201ENST00000512969 394 ntBASIC4.47□□□□□ -1.69
SSBP3Q9BWW4 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC4.47□□□□□ -1.69
SSBP3Q9BWW4 AC108471.1-201ENST00000513977 287 ntBASIC4.47□□□□□ -1.69
SSBP3Q9BWW4 RN7SKP219-201ENST00000516825 296 ntBASIC4.47□□□□□ -1.69
SSBP3Q9BWW4 AC027308.1-201ENST00000517993 110 ntBASIC4.47□□□□□ -1.69
SSBP3Q9BWW4 RANP9-201ENST00000519957 271 ntBASIC4.47□□□□□ -1.69
SSBP3Q9BWW4 AP005902.1-201ENST00000521358 186 ntBASIC4.47□□□□□ -1.69
SSBP3Q9BWW4 AP000676.2-201ENST00000529711 301 ntBASIC4.47□□□□□ -1.69
SSBP3Q9BWW4 CASP1-212ENST00000531166 300 ntTSL 5 BASIC4.47□□□□□ -1.69
SSBP3Q9BWW4 AC125612.1-201ENST00000547580 377 ntBASIC4.47□□□□□ -1.69
SSBP3Q9BWW4 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC4.47□□□□□ -1.69
SSBP3Q9BWW4 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC4.47□□□□□ -1.69
SSBP3Q9BWW4 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC4.47□□□□□ -1.69
SSBP3Q9BWW4 AC018552.3-201ENST00000567416 561 ntBASIC4.47□□□□□ -1.69
SSBP3Q9BWW4 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC4.47□□□□□ -1.69
SSBP3Q9BWW4 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC4.47□□□□□ -1.69
SSBP3Q9BWW4 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC4.47□□□□□ -1.69
SSBP3Q9BWW4 AC068790.3-201ENST00000602988 553 ntBASIC4.47□□□□□ -1.69
SSBP3Q9BWW4 AL592436.1-201ENST00000605135 558 ntBASIC4.47□□□□□ -1.69
SSBP3Q9BWW4 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC4.47□□□□□ -1.69
SSBP3Q9BWW4 AL022394.1-201ENST00000606979 292 ntBASIC4.47□□□□□ -1.69
SSBP3Q9BWW4 AC126915.2-201ENST00000610957 190 ntBASIC4.47□□□□□ -1.69
SSBP3Q9BWW4 AL121612.2-201ENST00000612261 482 ntBASIC4.47□□□□□ -1.69
SSBP3Q9BWW4 AC109583.2-201ENST00000617367 129 ntBASIC4.47□□□□□ -1.69
SSBP3Q9BWW4 ATM-230ENST00000640388 578 ntTSL 5 BASIC4.47□□□□□ -1.69
SSBP3Q9BWW4 AC073869.8-201ENST00000641806 335 ntBASIC4.47□□□□□ -1.69
SSBP3Q9BWW4 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
SSBP3Q9BWW4 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC4.47□□□□□ -1.69
SSBP3Q9BWW4 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC4.47□□□□□ -1.69
SSBP3Q9BWW4 OFD1P9Y-201ENST00000417699 1491 ntBASIC4.47□□□□□ -1.69
SSBP3Q9BWW4 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC4.47□□□□□ -1.69
SSBP3Q9BWW4 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC4.47□□□□□ -1.69
SSBP3Q9BWW4 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC4.47□□□□□ -1.69
SSBP3Q9BWW4 OR9K1P-202ENST00000641111 3217 ntBASIC4.47□□□□□ -1.69
SSBP3Q9BWW4 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC4.47□□□□□ -1.69
SSBP3Q9BWW4 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
SSBP3Q9BWW4 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC4.47□□□□□ -1.69
SSBP3Q9BWW4 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
SSBP3Q9BWW4 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
SSBP3Q9BWW4 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
SSBP3Q9BWW4 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC4.47□□□□□ -1.69
SSBP3Q9BWW4 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
SSBP3Q9BWW4 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC4.46□□□□□ -1.69
SSBP3Q9BWW4 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC4.46□□□□□ -1.69
SSBP3Q9BWW4 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC4.46□□□□□ -1.69
SSBP3Q9BWW4 USP44-208ENST00000552440 1818 ntTSL 5 BASIC4.46□□□□□ -1.69
SSBP3Q9BWW4 AL049641.1-201ENST00000441055 1948 ntBASIC4.46□□□□□ -1.69
SSBP3Q9BWW4 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
SSBP3Q9BWW4 AC007938.2-201ENST00000604666 2634 ntBASIC4.46□□□□□ -1.69
SSBP3Q9BWW4 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC4.46□□□□□ -1.69
SSBP3Q9BWW4 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.69
SSBP3Q9BWW4 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC4.46□□□□□ -1.69
SSBP3Q9BWW4 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
SSBP3Q9BWW4 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
SSBP3Q9BWW4 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
SSBP3Q9BWW4 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
SSBP3Q9BWW4 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC4.46□□□□□ -1.7
SSBP3Q9BWW4 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
SSBP3Q9BWW4 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC4.46□□□□□ -1.7
SSBP3Q9BWW4 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
SSBP3Q9BWW4 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC4.46□□□□□ -1.7
SSBP3Q9BWW4 TRIM51GP-201ENST00000534741 1350 ntBASIC4.46□□□□□ -1.7
SSBP3Q9BWW4 RNU6-552P-201ENST00000362869 119 ntBASIC4.46□□□□□ -1.7
SSBP3Q9BWW4 RNU6-1188P-201ENST00000363795 107 ntBASIC4.46□□□□□ -1.7
SSBP3Q9BWW4 RNU6-522P-201ENST00000364497 107 ntBASIC4.46□□□□□ -1.7
SSBP3Q9BWW4 Y_RNA.557-201ENST00000384680 107 ntBASIC4.46□□□□□ -1.7
SSBP3Q9BWW4 MIR105-2-201ENST00000385083 81 ntBASIC4.46□□□□□ -1.7
SSBP3Q9BWW4 MIR105-1-201ENST00000385222 81 ntBASIC4.46□□□□□ -1.7
SSBP3Q9BWW4 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
SSBP3Q9BWW4 ARF4P3-201ENST00000397387 509 ntBASIC4.46□□□□□ -1.7
SSBP3Q9BWW4 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC4.46□□□□□ -1.7
SSBP3Q9BWW4 AL078604.1-201ENST00000404609 466 ntBASIC4.46□□□□□ -1.7
SSBP3Q9BWW4 OR6C66P-201ENST00000414917 930 ntBASIC4.46□□□□□ -1.7
SSBP3Q9BWW4 AL139396.1-201ENST00000421137 167 ntBASIC4.46□□□□□ -1.7
SSBP3Q9BWW4 AC093655.2-201ENST00000425735 631 ntBASIC4.46□□□□□ -1.7
SSBP3Q9BWW4 AL139148.1-201ENST00000427122 680 ntBASIC4.46□□□□□ -1.7
SSBP3Q9BWW4 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC4.46□□□□□ -1.7
SSBP3Q9BWW4 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC4.46□□□□□ -1.7
SSBP3Q9BWW4 AC114495.1-201ENST00000441274 436 ntBASIC4.46□□□□□ -1.7
SSBP3Q9BWW4 IGKV1OR-3-201ENST00000446944 348 ntBASIC4.46□□□□□ -1.7
SSBP3Q9BWW4 RBMY2TP-201ENST00000451162 947 ntBASIC4.46□□□□□ -1.7
SSBP3Q9BWW4 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC4.46□□□□□ -1.7
SSBP3Q9BWW4 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC4.46□□□□□ -1.7
SSBP3Q9BWW4 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC4.46□□□□□ -1.7
SSBP3Q9BWW4 RNU6-941P-201ENST00000516346 108 ntBASIC4.46□□□□□ -1.7
SSBP3Q9BWW4 SOD1P3-201ENST00000518682 454 ntBASIC4.46□□□□□ -1.7
SSBP3Q9BWW4 AP001804.3-201ENST00000525146 880 ntBASIC4.46□□□□□ -1.7
SSBP3Q9BWW4 AP000889.2-201ENST00000532684 490 ntBASIC4.46□□□□□ -1.7
SSBP3Q9BWW4 AP004607.2-201ENST00000533949 322 ntBASIC4.46□□□□□ -1.7
SSBP3Q9BWW4 AC051619.2-201ENST00000559063 397 ntBASIC4.46□□□□□ -1.7
SSBP3Q9BWW4 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC4.46□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 81.8 ms