Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC2.13□□□□□ -2.07
AP1S3Q96PC3 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC2.13□□□□□ -2.07
AP1S3Q96PC3 RN7SKP40-201ENST00000517211 242 ntBASIC2.13□□□□□ -2.07
AP1S3Q96PC3 AC067904.2-201ENST00000517322 1283 ntBASIC2.13□□□□□ -2.07
AP1S3Q96PC3 AC025881.1-201ENST00000518851 512 ntBASIC2.13□□□□□ -2.07
AP1S3Q96PC3 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC2.13□□□□□ -2.07
AP1S3Q96PC3 MAL2-203ENST00000534619 578 ntTSL 4 BASIC2.13□□□□□ -2.07
AP1S3Q96PC3 AC084824.1-201ENST00000550917 1005 ntBASIC2.13□□□□□ -2.07
AP1S3Q96PC3 AC012409.1-202ENST00000558449 639 ntTSL 2 BASIC2.13□□□□□ -2.07
AP1S3Q96PC3 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC2.13□□□□□ -2.07
AP1S3Q96PC3 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC2.13□□□□□ -2.07
AP1S3Q96PC3 RPL12P50-201ENST00000603116 116 ntBASIC2.13□□□□□ -2.07
AP1S3Q96PC3 AL137843.1-201ENST00000605078 385 ntBASIC2.13□□□□□ -2.07
AP1S3Q96PC3 LINC00458-206ENST00000607494 849 ntTSL 3 BASIC2.13□□□□□ -2.07
AP1S3Q96PC3 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC2.13□□□□□ -2.07
AP1S3Q96PC3 AC009570.1-201ENST00000609599 745 ntBASIC2.13□□□□□ -2.07
AP1S3Q96PC3 MIR6748-201ENST00000610433 71 ntBASIC2.13□□□□□ -2.07
AP1S3Q96PC3 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC2.13□□□□□ -2.07
AP1S3Q96PC3 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.13□□□□□ -2.07
AP1S3Q96PC3 FRG1DP-201ENST00000635586 771 ntBASIC2.13□□□□□ -2.07
AP1S3Q96PC3 FO624990.1-201ENST00000636373 85 ntBASIC2.13□□□□□ -2.07
AP1S3Q96PC3 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
AP1S3Q96PC3 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC2.13□□□□□ -2.07
AP1S3Q96PC3 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.13□□□□□ -2.07
AP1S3Q96PC3 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC2.12□□□□□ -2.07
AP1S3Q96PC3 AC099654.7-201ENST00000635788 2127 ntBASIC2.12□□□□□ -2.07
AP1S3Q96PC3 AC009501.3-201ENST00000605001 1352 ntBASIC2.12□□□□□ -2.07
AP1S3Q96PC3 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
AP1S3Q96PC3 RNU1-35P-201ENST00000362782 153 ntBASIC2.12□□□□□ -2.07
AP1S3Q96PC3 RNU1-64P-201ENST00000365443 163 ntBASIC2.12□□□□□ -2.07
AP1S3Q96PC3 OR6K3-202ENST00000368146 996 ntBASIC2.12□□□□□ -2.07
AP1S3Q96PC3 SNORD21-201ENST00000383953 95 ntBASIC2.12□□□□□ -2.07
AP1S3Q96PC3 RNU1-138P-201ENST00000384093 164 ntBASIC2.12□□□□□ -2.07
AP1S3Q96PC3 MIR1250-201ENST00000408098 113 ntBASIC2.12□□□□□ -2.07
AP1S3Q96PC3 RNU2-25P-201ENST00000411041 191 ntBASIC2.12□□□□□ -2.07
AP1S3Q96PC3 RAB28P1-201ENST00000411517 641 ntBASIC2.12□□□□□ -2.07
AP1S3Q96PC3 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC2.12□□□□□ -2.07
AP1S3Q96PC3 TRIM60P8Y-201ENST00000436338 762 ntBASIC2.12□□□□□ -2.07
AP1S3Q96PC3 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC2.12□□□□□ -2.07
AP1S3Q96PC3 CDC27P1-201ENST00000445384 715 ntBASIC2.12□□□□□ -2.07
AP1S3Q96PC3 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC2.12□□□□□ -2.07
AP1S3Q96PC3 AL031183.1-201ENST00000457667 207 ntBASIC2.12□□□□□ -2.07
AP1S3Q96PC3 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC2.12□□□□□ -2.07
AP1S3Q96PC3 AC015908.1-201ENST00000478739 476 ntBASIC2.12□□□□□ -2.07
AP1S3Q96PC3 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC2.12□□□□□ -2.07
AP1S3Q96PC3 RPL37P25-201ENST00000507308 276 ntBASIC2.12□□□□□ -2.07
AP1S3Q96PC3 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC2.12□□□□□ -2.07
AP1S3Q96PC3 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.12□□□□□ -2.07
AP1S3Q96PC3 RPPH1-2P-201ENST00000516688 293 ntBASIC2.12□□□□□ -2.07
AP1S3Q96PC3 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC2.12□□□□□ -2.07
AP1S3Q96PC3 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC2.12□□□□□ -2.07
AP1S3Q96PC3 UBL5P2-201ENST00000583788 219 ntBASIC2.12□□□□□ -2.07
AP1S3Q96PC3 AC018371.1-201ENST00000584560 640 ntTSL 3 BASIC2.12□□□□□ -2.07
AP1S3Q96PC3 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC2.12□□□□□ -2.07
AP1S3Q96PC3 GLUD1P4-201ENST00000590914 418 ntBASIC2.12□□□□□ -2.07
AP1S3Q96PC3 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC2.12□□□□□ -2.07
AP1S3Q96PC3 AC090115.4-201ENST00000609970 188 ntBASIC2.12□□□□□ -2.07
AP1S3Q96PC3 U6.48-201ENST00000618523 106 ntBASIC2.12□□□□□ -2.07
AP1S3Q96PC3 AC018692.3-201ENST00000623929 123 ntBASIC2.12□□□□□ -2.07
AP1S3Q96PC3 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC2.12□□□□□ -2.07
AP1S3Q96PC3 ZNF93-209ENST00000638737 1020 ntTSL 5 BASIC2.12□□□□□ -2.07
AP1S3Q96PC3 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC2.12□□□□□ -2.07
AP1S3Q96PC3 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC2.12□□□□□ -2.07
AP1S3Q96PC3 AC026241.1-201ENST00000517873 2142 ntBASIC2.12□□□□□ -2.07
AP1S3Q96PC3 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.12□□□□□ -2.07
AP1S3Q96PC3 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.11□□□□□ -2.07
AP1S3Q96PC3 MIR6073-201ENST00000352083 89 ntBASIC2.11□□□□□ -2.07
AP1S3Q96PC3 MIR181A2-201ENST00000384863 110 ntBASIC2.11□□□□□ -2.07
AP1S3Q96PC3 AL512633.1-201ENST00000399931 655 ntBASIC2.11□□□□□ -2.07
AP1S3Q96PC3 AC105402.1-201ENST00000413336 545 ntBASIC2.11□□□□□ -2.07
AP1S3Q96PC3 AC016769.2-201ENST00000414815 475 ntBASIC2.11□□□□□ -2.07
AP1S3Q96PC3 RPL21P32-201ENST00000419877 477 ntBASIC2.11□□□□□ -2.07
AP1S3Q96PC3 RPL7P37-201ENST00000425095 738 ntBASIC2.11□□□□□ -2.07
AP1S3Q96PC3 AL445528.1-201ENST00000426330 420 ntBASIC2.11□□□□□ -2.07
AP1S3Q96PC3 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC2.11□□□□□ -2.07
AP1S3Q96PC3 AC129850.1-201ENST00000436203 508 ntBASIC2.11□□□□□ -2.07
AP1S3Q96PC3 LINC01851-201ENST00000443419 637 ntTSL 3 BASIC2.11□□□□□ -2.07
AP1S3Q96PC3 AC023512.1-201ENST00000444513 499 ntBASIC2.11□□□□□ -2.07
AP1S3Q96PC3 AL162389.1-201ENST00000449233 177 ntBASIC2.11□□□□□ -2.07
AP1S3Q96PC3 PDSS1P2-201ENST00000449397 678 ntBASIC2.11□□□□□ -2.07
AP1S3Q96PC3 AC073901.1-201ENST00000462471 408 ntBASIC2.11□□□□□ -2.07
AP1S3Q96PC3 AC117440.1-201ENST00000474107 571 ntBASIC2.11□□□□□ -2.07
AP1S3Q96PC3 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC2.11□□□□□ -2.07
AP1S3Q96PC3 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC2.11□□□□□ -2.07
AP1S3Q96PC3 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC2.11□□□□□ -2.07
AP1S3Q96PC3 AC008494.2-201ENST00000514544 370 ntBASIC2.11□□□□□ -2.07
AP1S3Q96PC3 SNORA31.11-201ENST00000516528 139 ntBASIC2.11□□□□□ -2.07
AP1S3Q96PC3 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC2.11□□□□□ -2.07
AP1S3Q96PC3 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC2.11□□□□□ -2.07
AP1S3Q96PC3 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC2.11□□□□□ -2.07
AP1S3Q96PC3 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC2.11□□□□□ -2.07
AP1S3Q96PC3 AP002404.1-201ENST00000532005 451 ntBASIC2.11□□□□□ -2.07
AP1S3Q96PC3 AP000857.1-201ENST00000532151 543 ntBASIC2.11□□□□□ -2.07
AP1S3Q96PC3 LINC02552-203ENST00000545630 583 ntTSL 2 BASIC2.11□□□□□ -2.07
AP1S3Q96PC3 AC090970.1-201ENST00000561207 381 ntTSL 5 BASIC2.11□□□□□ -2.07
AP1S3Q96PC3 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC2.11□□□□□ -2.07
AP1S3Q96PC3 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC2.11□□□□□ -2.07
AP1S3Q96PC3 AC009163.5-201ENST00000575421 637 ntBASIC2.11□□□□□ -2.07
AP1S3Q96PC3 MIR3605-201ENST00000583214 100 ntBASIC2.11□□□□□ -2.07
AP1S3Q96PC3 MIR3922-201ENST00000585192 84 ntBASIC2.11□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 104 ms