Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 CEP170P1-201ENST00000502249 4587 ntBASIC3.73□□□□□ -1.81
VPS33AQ96AX1 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
VPS33AQ96AX1 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.73□□□□□ -1.81
VPS33AQ96AX1 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.73□□□□□ -1.81
VPS33AQ96AX1 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.73□□□□□ -1.81
VPS33AQ96AX1 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC3.72□□□□□ -1.81
VPS33AQ96AX1 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
VPS33AQ96AX1 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.72□□□□□ -1.81
VPS33AQ96AX1 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
VPS33AQ96AX1 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC3.72□□□□□ -1.81
VPS33AQ96AX1 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
VPS33AQ96AX1 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.72□□□□□ -1.81
VPS33AQ96AX1 RNU6-28P-201ENST00000362378 107 ntBASIC3.72□□□□□ -1.81
VPS33AQ96AX1 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
VPS33AQ96AX1 HSPE1P8-201ENST00000406997 288 ntBASIC3.72□□□□□ -1.81
VPS33AQ96AX1 RNU2-47P-201ENST00000410649 186 ntBASIC3.72□□□□□ -1.81
VPS33AQ96AX1 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC3.72□□□□□ -1.81
VPS33AQ96AX1 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC3.72□□□□□ -1.81
VPS33AQ96AX1 MTCYBP38-201ENST00000417160 1123 ntBASIC3.72□□□□□ -1.81
VPS33AQ96AX1 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC3.72□□□□□ -1.81
VPS33AQ96AX1 BEND7P1-201ENST00000422058 457 ntBASIC3.72□□□□□ -1.81
VPS33AQ96AX1 RPL23AP38-201ENST00000423801 469 ntBASIC3.72□□□□□ -1.81
VPS33AQ96AX1 MTCO1P39-201ENST00000426148 480 ntBASIC3.72□□□□□ -1.81
VPS33AQ96AX1 AC079780.1-201ENST00000428259 207 ntBASIC3.72□□□□□ -1.81
VPS33AQ96AX1 BRWD1P3-201ENST00000428816 390 ntBASIC3.72□□□□□ -1.81
VPS33AQ96AX1 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC3.72□□□□□ -1.81
VPS33AQ96AX1 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
VPS33AQ96AX1 RPS25P9-201ENST00000435591 252 ntBASIC3.72□□□□□ -1.81
VPS33AQ96AX1 TBCAP1-201ENST00000436520 327 ntBASIC3.72□□□□□ -1.81
VPS33AQ96AX1 MTCO2P20-201ENST00000437339 673 ntBASIC3.72□□□□□ -1.81
VPS33AQ96AX1 AL121871.1-201ENST00000443413 436 ntBASIC3.72□□□□□ -1.81
VPS33AQ96AX1 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.72□□□□□ -1.81
VPS33AQ96AX1 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC3.72□□□□□ -1.81
VPS33AQ96AX1 AC098824.1-201ENST00000453565 980 ntBASIC3.72□□□□□ -1.81
VPS33AQ96AX1 USP9YP25-201ENST00000457708 443 ntBASIC3.72□□□□□ -1.81
VPS33AQ96AX1 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC3.72□□□□□ -1.81
VPS33AQ96AX1 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC3.72□□□□□ -1.81
VPS33AQ96AX1 AC078785.3-201ENST00000476607 425 ntBASIC3.72□□□□□ -1.81
VPS33AQ96AX1 RPL7P18-201ENST00000478965 734 ntBASIC3.72□□□□□ -1.81
VPS33AQ96AX1 RN7SL459P-201ENST00000481078 302 ntBASIC3.72□□□□□ -1.81
VPS33AQ96AX1 RPS23P1-201ENST00000491662 432 ntBASIC3.72□□□□□ -1.81
VPS33AQ96AX1 AL132838.2-201ENST00000492041 314 ntBASIC3.72□□□□□ -1.81
VPS33AQ96AX1 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC3.72□□□□□ -1.81
VPS33AQ96AX1 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC3.72□□□□□ -1.81
VPS33AQ96AX1 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC3.72□□□□□ -1.81
VPS33AQ96AX1 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC3.72□□□□□ -1.81
VPS33AQ96AX1 FABP5P12-201ENST00000515543 389 ntBASIC3.72□□□□□ -1.81
VPS33AQ96AX1 RNU1-61P-201ENST00000516107 151 ntBASIC3.72□□□□□ -1.81
VPS33AQ96AX1 SNORA31.8-201ENST00000516327 108 ntBASIC3.72□□□□□ -1.81
VPS33AQ96AX1 C1GALT1P3-201ENST00000522049 819 ntBASIC3.72□□□□□ -1.81
VPS33AQ96AX1 MTCO2P15-201ENST00000532655 656 ntBASIC3.72□□□□□ -1.81
VPS33AQ96AX1 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
VPS33AQ96AX1 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC3.72□□□□□ -1.81
VPS33AQ96AX1 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC3.72□□□□□ -1.81
VPS33AQ96AX1 MIR3186-201ENST00000577404 85 ntBASIC3.72□□□□□ -1.81
VPS33AQ96AX1 RN7SL600P-201ENST00000581811 299 ntBASIC3.72□□□□□ -1.81
VPS33AQ96AX1 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC3.72□□□□□ -1.81
VPS33AQ96AX1 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC3.72□□□□□ -1.81
VPS33AQ96AX1 AC091057.2-201ENST00000602594 792 ntBASIC3.72□□□□□ -1.81
VPS33AQ96AX1 DUXAP11-201ENST00000603858 526 ntBASIC3.72□□□□□ -1.81
VPS33AQ96AX1 AC008745.1-201ENST00000604064 271 ntBASIC3.72□□□□□ -1.81
VPS33AQ96AX1 AL592221.1-201ENST00000605266 382 ntBASIC3.72□□□□□ -1.81
VPS33AQ96AX1 AL139089.1-201ENST00000620372 975 ntBASIC3.72□□□□□ -1.81
VPS33AQ96AX1 MIR8059-201ENST00000620427 81 ntBASIC3.72□□□□□ -1.81
VPS33AQ96AX1 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC3.72□□□□□ -1.81
VPS33AQ96AX1 AC010608.2-201ENST00000624830 470 ntBASIC3.72□□□□□ -1.81
VPS33AQ96AX1 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC3.72□□□□□ -1.81
VPS33AQ96AX1 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.72□□□□□ -1.81
VPS33AQ96AX1 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC3.72□□□□□ -1.81
VPS33AQ96AX1 THUMPD3P1-201ENST00000506556 1480 ntBASIC3.72□□□□□ -1.81
VPS33AQ96AX1 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.72□□□□□ -1.81
VPS33AQ96AX1 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
VPS33AQ96AX1 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC3.71□□□□□ -1.81
VPS33AQ96AX1 AC118273.1-201ENST00000525324 3006 ntBASIC3.71□□□□□ -1.81
VPS33AQ96AX1 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.71□□□□□ -1.82
VPS33AQ96AX1 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
VPS33AQ96AX1 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
VPS33AQ96AX1 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.71□□□□□ -1.82
VPS33AQ96AX1 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
VPS33AQ96AX1 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
VPS33AQ96AX1 RNA5SP295-201ENST00000362655 121 ntBASIC3.71□□□□□ -1.82
VPS33AQ96AX1 RNU6-173P-201ENST00000364215 104 ntBASIC3.71□□□□□ -1.82
VPS33AQ96AX1 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.71□□□□□ -1.82
VPS33AQ96AX1 RPL26P29-201ENST00000415623 438 ntBASIC3.71□□□□□ -1.82
VPS33AQ96AX1 LINC01468-201ENST00000422763 570 ntTSL 3 BASIC3.71□□□□□ -1.82
VPS33AQ96AX1 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC3.71□□□□□ -1.82
VPS33AQ96AX1 AL590103.1-201ENST00000434488 307 ntBASIC3.71□□□□□ -1.82
VPS33AQ96AX1 AC004866.2-201ENST00000438285 481 ntBASIC3.71□□□□□ -1.82
VPS33AQ96AX1 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC3.71□□□□□ -1.82
VPS33AQ96AX1 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC3.71□□□□□ -1.82
VPS33AQ96AX1 NECAP1P2-201ENST00000455668 727 ntBASIC3.71□□□□□ -1.82
VPS33AQ96AX1 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC3.71□□□□□ -1.82
VPS33AQ96AX1 UQCRHP4-201ENST00000471686 272 ntBASIC3.71□□□□□ -1.82
VPS33AQ96AX1 RPS29P22-201ENST00000472363 168 ntBASIC3.71□□□□□ -1.82
VPS33AQ96AX1 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC3.71□□□□□ -1.82
VPS33AQ96AX1 AL049830.2-201ENST00000480072 201 ntBASIC3.71□□□□□ -1.82
VPS33AQ96AX1 AC108729.1-201ENST00000487812 947 ntBASIC3.71□□□□□ -1.82
VPS33AQ96AX1 ENSA-210ENST00000503241 574 ntTSL 3 BASIC3.71□□□□□ -1.82
VPS33AQ96AX1 AC020699.1-201ENST00000505161 445 ntBASIC3.71□□□□□ -1.82
VPS33AQ96AX1 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC3.71□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 106.6 ms