Protein–RNA interactions for Protein: Q92889

ERCC4, DNA repair endonuclease XPF, humanhuman

Predicted RBP Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4Q92889 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC5.11□□□□□ -1.59
ERCC4Q92889 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC5.11□□□□□ -1.59
ERCC4Q92889 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC5.11□□□□□ -1.59
ERCC4Q92889 HMGB1P29-201ENST00000505659 499 ntBASIC5.11□□□□□ -1.59
ERCC4Q92889 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC5.11□□□□□ -1.59
ERCC4Q92889 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC5.11□□□□□ -1.59
ERCC4Q92889 OR7H2P-201ENST00000513483 306 ntBASIC5.11□□□□□ -1.59
ERCC4Q92889 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC5.11□□□□□ -1.59
ERCC4Q92889 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC5.11□□□□□ -1.59
ERCC4Q92889 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC5.11□□□□□ -1.59
ERCC4Q92889 MIR4716-201ENST00000579628 84 ntBASIC5.11□□□□□ -1.59
ERCC4Q92889 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC5.11□□□□□ -1.59
ERCC4Q92889 MAGOH2P-202ENST00000584384 429 ntBASIC5.11□□□□□ -1.59
ERCC4Q92889 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC5.11□□□□□ -1.59
ERCC4Q92889 AL160290.3-201ENST00000604869 165 ntBASIC5.11□□□□□ -1.59
ERCC4Q92889 AC010201.1-201ENST00000605051 540 ntBASIC5.11□□□□□ -1.59
ERCC4Q92889 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC5.11□□□□□ -1.59
ERCC4Q92889 RMST_9.1-201ENST00000619945 193 ntBASIC5.11□□□□□ -1.59
ERCC4Q92889 AL445264.1-201ENST00000621719 171 ntBASIC5.11□□□□□ -1.59
ERCC4Q92889 AP001784.1-201ENST00000624107 428 ntBASIC5.11□□□□□ -1.59
ERCC4Q92889 PISRT1-201ENST00000626175 531 ntBASIC5.11□□□□□ -1.59
ERCC4Q92889 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC5.11□□□□□ -1.59
ERCC4Q92889 AP002001.2-201ENST00000529025 1469 ntBASIC5.11□□□□□ -1.59
ERCC4Q92889 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
ERCC4Q92889 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
ERCC4Q92889 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
ERCC4Q92889 NXPH1-205ENST00000602349 1953 ntBASIC5.11□□□□□ -1.59
ERCC4Q92889 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
ERCC4Q92889 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC5.1□□□□□ -1.59
ERCC4Q92889 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC5.1□□□□□ -1.59
ERCC4Q92889 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
ERCC4Q92889 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC5.1□□□□□ -1.59
ERCC4Q92889 MIR448-201ENST00000362131 111 ntBASIC5.1□□□□□ -1.59
ERCC4Q92889 U8.3-201ENST00000363321 132 ntBASIC5.1□□□□□ -1.59
ERCC4Q92889 RNY4P14-201ENST00000363656 96 ntBASIC5.1□□□□□ -1.59
ERCC4Q92889 RNU1-85P-201ENST00000364127 164 ntBASIC5.1□□□□□ -1.59
ERCC4Q92889 RNU6-343P-201ENST00000364709 104 ntBASIC5.1□□□□□ -1.59
ERCC4Q92889 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC5.1□□□□□ -1.59
ERCC4Q92889 RNU6-1103P-201ENST00000384150 107 ntBASIC5.1□□□□□ -1.59
ERCC4Q92889 EIF5P1-201ENST00000400019 1231 ntBASIC5.1□□□□□ -1.59
ERCC4Q92889 CALM2P3-201ENST00000400429 449 ntBASIC5.1□□□□□ -1.59
ERCC4Q92889 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC5.1□□□□□ -1.59
ERCC4Q92889 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC5.1□□□□□ -1.59
ERCC4Q92889 RAD23BP1-201ENST00000421404 1227 ntBASIC5.1□□□□□ -1.59
ERCC4Q92889 RPL36P19-201ENST00000430744 301 ntBASIC5.1□□□□□ -1.59
ERCC4Q92889 RPEP2-201ENST00000432149 701 ntBASIC5.1□□□□□ -1.59
ERCC4Q92889 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC5.1□□□□□ -1.59
ERCC4Q92889 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC5.1□□□□□ -1.59
ERCC4Q92889 AC069285.2-201ENST00000440210 275 ntBASIC5.1□□□□□ -1.59
ERCC4Q92889 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC5.1□□□□□ -1.59
ERCC4Q92889 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC5.1□□□□□ -1.59
ERCC4Q92889 AC112653.1-201ENST00000443851 386 ntBASIC5.1□□□□□ -1.59
ERCC4Q92889 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC5.1□□□□□ -1.59
ERCC4Q92889 RPL35AP28-201ENST00000459730 331 ntBASIC5.1□□□□□ -1.59
ERCC4Q92889 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
ERCC4Q92889 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC5.1□□□□□ -1.59
ERCC4Q92889 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC5.1□□□□□ -1.59
ERCC4Q92889 SAP18P1-201ENST00000512058 390 ntBASIC5.1□□□□□ -1.59
ERCC4Q92889 AC007016.1-201ENST00000512110 244 ntBASIC5.1□□□□□ -1.59
ERCC4Q92889 MFSD4BP1-201ENST00000513330 1552 ntBASIC5.1□□□□□ -1.59
ERCC4Q92889 AC034159.1-201ENST00000513885 583 ntBASIC5.1□□□□□ -1.59
ERCC4Q92889 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC5.1□□□□□ -1.59
ERCC4Q92889 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC5.1□□□□□ -1.59
ERCC4Q92889 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC5.1□□□□□ -1.59
ERCC4Q92889 AC008127.2-201ENST00000549925 1075 ntBASIC5.1□□□□□ -1.59
ERCC4Q92889 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC5.1□□□□□ -1.59
ERCC4Q92889 AL110118.1-201ENST00000553543 400 ntBASIC5.1□□□□□ -1.59
ERCC4Q92889 AL121579.1-201ENST00000555129 305 ntBASIC5.1□□□□□ -1.59
ERCC4Q92889 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC5.1□□□□□ -1.59
ERCC4Q92889 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC5.1□□□□□ -1.59
ERCC4Q92889 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC5.1□□□□□ -1.59
ERCC4Q92889 AL391840.1-201ENST00000571144 367 ntBASIC5.1□□□□□ -1.59
ERCC4Q92889 AC012417.1-201ENST00000582307 1039 ntBASIC5.1□□□□□ -1.59
ERCC4Q92889 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC5.1□□□□□ -1.59
ERCC4Q92889 RPL7P50-201ENST00000600588 727 ntBASIC5.1□□□□□ -1.59
ERCC4Q92889 ACTR3BP1-201ENST00000605584 1247 ntBASIC5.1□□□□□ -1.59
ERCC4Q92889 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC5.1□□□□□ -1.59
ERCC4Q92889 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC5.1□□□□□ -1.59
ERCC4Q92889 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC5.1□□□□□ -1.59
ERCC4Q92889 MIR6863-201ENST00000636112 90 ntBASIC5.1□□□□□ -1.59
ERCC4Q92889 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC5.1□□□□□ -1.59
ERCC4Q92889 MIR6715B-201ENST00000637172 77 ntBASIC5.1□□□□□ -1.59
ERCC4Q92889 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC5.1□□□□□ -1.59
ERCC4Q92889 AC068254.2-201ENST00000623938 3577 ntBASIC5.1□□□□□ -1.59
ERCC4Q92889 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
ERCC4Q92889 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC5.09□□□□□ -1.59
ERCC4Q92889 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
ERCC4Q92889 CCT4P2-201ENST00000233836 1548 ntBASIC5.09□□□□□ -1.59
ERCC4Q92889 ANKRD20A10P-201ENST00000457591 1515 ntBASIC5.09□□□□□ -1.59
ERCC4Q92889 RN7SKP103-201ENST00000363848 320 ntBASIC5.09□□□□□ -1.59
ERCC4Q92889 Y_RNA.296-201ENST00000364930 108 ntBASIC5.09□□□□□ -1.59
ERCC4Q92889 Y_RNA.372-201ENST00000365599 102 ntBASIC5.09□□□□□ -1.59
ERCC4Q92889 RNU6-1293P-201ENST00000384077 107 ntBASIC5.09□□□□□ -1.59
ERCC4Q92889 RPS3AP24-201ENST00000407896 734 ntBASIC5.09□□□□□ -1.59
ERCC4Q92889 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
ERCC4Q92889 AC233728.2-201ENST00000425348 757 ntBASIC5.09□□□□□ -1.59
ERCC4Q92889 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC5.09□□□□□ -1.59
ERCC4Q92889 AL031736.2-201ENST00000426573 787 ntBASIC5.09□□□□□ -1.59
ERCC4Q92889 AC104837.2-201ENST00000427236 424 ntBASIC5.09□□□□□ -1.59
ERCC4Q92889 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC5.09□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 116.3 ms