Protein–RNA interactions for Protein: Q8NFH5

NUP35, Nucleoporin NUP53, humanhuman

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP35Q8NFH5 AC016550.3-201ENST00000515706 767 ntBASIC2.2□□□□□ -2.06
NUP35Q8NFH5 IGLVIV-66-1-201ENST00000521832 460 ntBASIC2.2□□□□□ -2.06
NUP35Q8NFH5 AC004486.1-201ENST00000546846 233 ntBASIC2.2□□□□□ -2.06
NUP35Q8NFH5 AC128657.1-201ENST00000549459 145 ntBASIC2.2□□□□□ -2.06
NUP35Q8NFH5 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC2.2□□□□□ -2.06
NUP35Q8NFH5 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC2.2□□□□□ -2.06
NUP35Q8NFH5 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
NUP35Q8NFH5 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC2.2□□□□□ -2.06
NUP35Q8NFH5 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC2.2□□□□□ -2.06
NUP35Q8NFH5 AC009570.1-201ENST00000609599 745 ntBASIC2.2□□□□□ -2.06
NUP35Q8NFH5 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC2.2□□□□□ -2.06
NUP35Q8NFH5 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC2.2□□□□□ -2.06
NUP35Q8NFH5 AC099506.2-201ENST00000623074 221 ntBASIC2.2□□□□□ -2.06
NUP35Q8NFH5 AC243312.2-201ENST00000623340 601 ntBASIC2.2□□□□□ -2.06
NUP35Q8NFH5 AL034408.1-202ENST00000636088 415 ntBASIC2.2□□□□□ -2.06
NUP35Q8NFH5 AC006378.2-201ENST00000623178 2476 ntBASIC2.2□□□□□ -2.06
NUP35Q8NFH5 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC2.2□□□□□ -2.06
NUP35Q8NFH5 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC2.2□□□□□ -2.06
NUP35Q8NFH5 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC2.2□□□□□ -2.06
NUP35Q8NFH5 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
NUP35Q8NFH5 AL035425.3-201ENST00000564206 4996 ntBASIC2.19□□□□□ -2.06
NUP35Q8NFH5 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
NUP35Q8NFH5 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC2.19□□□□□ -2.06
NUP35Q8NFH5 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.19□□□□□ -2.06
NUP35Q8NFH5 AC016716.1-201ENST00000265882 708 ntBASIC2.19□□□□□ -2.06
NUP35Q8NFH5 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
NUP35Q8NFH5 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC2.19□□□□□ -2.06
NUP35Q8NFH5 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
NUP35Q8NFH5 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
NUP35Q8NFH5 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
NUP35Q8NFH5 MIR218-2-201ENST00000385006 110 ntBASIC2.19□□□□□ -2.06
NUP35Q8NFH5 RPS4XP3-201ENST00000398541 413 ntBASIC2.19□□□□□ -2.06
NUP35Q8NFH5 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC2.19□□□□□ -2.06
NUP35Q8NFH5 AC063979.1-201ENST00000415539 377 ntBASIC2.19□□□□□ -2.06
NUP35Q8NFH5 RPL21P32-201ENST00000419877 477 ntBASIC2.19□□□□□ -2.06
NUP35Q8NFH5 AL513175.1-201ENST00000431492 780 ntBASIC2.19□□□□□ -2.06
NUP35Q8NFH5 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC2.19□□□□□ -2.06
NUP35Q8NFH5 AC011242.1-201ENST00000433596 1158 ntBASIC2.19□□□□□ -2.06
NUP35Q8NFH5 LINC01378-202ENST00000437514 783 ntTSL 3 BASIC2.19□□□□□ -2.06
NUP35Q8NFH5 HSFY3P-201ENST00000444242 1191 ntBASIC2.19□□□□□ -2.06
NUP35Q8NFH5 AL133547.1-201ENST00000448546 220 ntBASIC2.19□□□□□ -2.06
NUP35Q8NFH5 AP001025.2-201ENST00000490908 477 ntBASIC2.19□□□□□ -2.06
NUP35Q8NFH5 AC108157.1-201ENST00000510511 539 ntBASIC2.19□□□□□ -2.06
NUP35Q8NFH5 MTND5P4-201ENST00000514978 288 ntBASIC2.19□□□□□ -2.06
NUP35Q8NFH5 AC022616.2-201ENST00000523185 300 ntBASIC2.19□□□□□ -2.06
NUP35Q8NFH5 MTERF3-205ENST00000524341 776 ntTSL 3 BASIC2.19□□□□□ -2.06
NUP35Q8NFH5 AP001804.3-201ENST00000525146 880 ntBASIC2.19□□□□□ -2.06
NUP35Q8NFH5 OR10V3P-201ENST00000525712 725 ntBASIC2.19□□□□□ -2.06
NUP35Q8NFH5 CR383656.14-201ENST00000551951 406 ntBASIC2.19□□□□□ -2.06
NUP35Q8NFH5 AC087481.2-201ENST00000565492 330 ntBASIC2.19□□□□□ -2.06
NUP35Q8NFH5 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC2.19□□□□□ -2.06
NUP35Q8NFH5 RPL23AP78-201ENST00000599928 470 ntBASIC2.19□□□□□ -2.06
NUP35Q8NFH5 AL161734.1-201ENST00000609720 557 ntBASIC2.19□□□□□ -2.06
NUP35Q8NFH5 AC140725.3-201ENST00000616193 880 ntBASIC2.19□□□□□ -2.06
NUP35Q8NFH5 SNHG22-203ENST00000617833 660 ntBASIC2.19□□□□□ -2.06
NUP35Q8NFH5 AL161637.1-201ENST00000622380 412 ntBASIC2.19□□□□□ -2.06
NUP35Q8NFH5 CR392039.5-201ENST00000623201 510 ntBASIC2.19□□□□□ -2.06
NUP35Q8NFH5 AC244258.1-201ENST00000637553 1071 ntBASIC2.19□□□□□ -2.06
NUP35Q8NFH5 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC2.19□□□□□ -2.06
NUP35Q8NFH5 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
NUP35Q8NFH5 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC2.18□□□□□ -2.06
NUP35Q8NFH5 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.18□□□□□ -2.06
NUP35Q8NFH5 ZNF734P-201ENST00000419494 1534 ntBASIC2.18□□□□□ -2.06
NUP35Q8NFH5 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.18□□□□□ -2.06
NUP35Q8NFH5 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.18□□□□□ -2.06
NUP35Q8NFH5 OR52E6-202ENST00000379946 954 ntBASIC2.18□□□□□ -2.06
NUP35Q8NFH5 MIR512-1-201ENST00000384913 84 ntBASIC2.18□□□□□ -2.06
NUP35Q8NFH5 MIR592-201ENST00000384959 97 ntBASIC2.18□□□□□ -2.06
NUP35Q8NFH5 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
NUP35Q8NFH5 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
NUP35Q8NFH5 AL139095.1-201ENST00000404326 391 ntBASIC2.18□□□□□ -2.06
NUP35Q8NFH5 RNA5SP56-201ENST00000410277 118 ntBASIC2.18□□□□□ -2.06
NUP35Q8NFH5 HSFY4P-201ENST00000415994 1181 ntBASIC2.18□□□□□ -2.06
NUP35Q8NFH5 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC2.18□□□□□ -2.06
NUP35Q8NFH5 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC2.18□□□□□ -2.06
NUP35Q8NFH5 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC2.18□□□□□ -2.06
NUP35Q8NFH5 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC2.18□□□□□ -2.06
NUP35Q8NFH5 AC018644.1-201ENST00000429934 551 ntBASIC2.18□□□□□ -2.06
NUP35Q8NFH5 RPL36P19-201ENST00000430744 301 ntBASIC2.18□□□□□ -2.06
NUP35Q8NFH5 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC2.18□□□□□ -2.06
NUP35Q8NFH5 AC016696.1-201ENST00000446949 318 ntBASIC2.18□□□□□ -2.06
NUP35Q8NFH5 AL590664.1-201ENST00000448065 339 ntBASIC2.18□□□□□ -2.06
NUP35Q8NFH5 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC2.18□□□□□ -2.06
NUP35Q8NFH5 AP000705.1-201ENST00000454567 350 ntBASIC2.18□□□□□ -2.06
NUP35Q8NFH5 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC2.18□□□□□ -2.06
NUP35Q8NFH5 PRELID3BP6-201ENST00000503839 571 ntBASIC2.18□□□□□ -2.06
NUP35Q8NFH5 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC2.18□□□□□ -2.06
NUP35Q8NFH5 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC2.18□□□□□ -2.06
NUP35Q8NFH5 HMGN1P15-201ENST00000513870 295 ntBASIC2.18□□□□□ -2.06
NUP35Q8NFH5 SNORA9.3-201ENST00000516383 129 ntBASIC2.18□□□□□ -2.06
NUP35Q8NFH5 RNU1-45P-201ENST00000517191 141 ntBASIC2.18□□□□□ -2.06
NUP35Q8NFH5 FAM60DP-201ENST00000524174 632 ntBASIC2.18□□□□□ -2.06
NUP35Q8NFH5 RGS4-207ENST00000527809 817 ntTSL 4 BASIC2.18□□□□□ -2.06
NUP35Q8NFH5 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC2.18□□□□□ -2.06
NUP35Q8NFH5 AL121603.1-201ENST00000553815 142 ntBASIC2.18□□□□□ -2.06
NUP35Q8NFH5 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC2.18□□□□□ -2.06
NUP35Q8NFH5 MIR3670-2-201ENST00000582974 65 ntBASIC2.18□□□□□ -2.06
NUP35Q8NFH5 MIR3670-1-201ENST00000584160 65 ntBASIC2.18□□□□□ -2.06
NUP35Q8NFH5 MIR3670-3-201ENST00000584855 65 ntBASIC2.18□□□□□ -2.06
NUP35Q8NFH5 GLUD1P4-201ENST00000590914 418 ntBASIC2.18□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 152.3 ms