Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC3.37□□□□□ -1.87
CCDC50Q8IVM0 HIGD1AP1-201ENST00000550979 275 ntBASIC3.37□□□□□ -1.87
CCDC50Q8IVM0 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
CCDC50Q8IVM0 AL049835.1-201ENST00000555850 514 ntTSL 3 BASIC3.37□□□□□ -1.87
CCDC50Q8IVM0 AC107954.1-201ENST00000565906 727 ntBASIC3.37□□□□□ -1.87
CCDC50Q8IVM0 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC3.37□□□□□ -1.87
CCDC50Q8IVM0 AC093227.2-201ENST00000589357 285 ntBASIC3.37□□□□□ -1.87
CCDC50Q8IVM0 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC3.37□□□□□ -1.87
CCDC50Q8IVM0 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC3.37□□□□□ -1.87
CCDC50Q8IVM0 AC025588.3-201ENST00000604182 274 ntBASIC3.37□□□□□ -1.87
CCDC50Q8IVM0 AC092354.2-201ENST00000607786 514 ntBASIC3.37□□□□□ -1.87
CCDC50Q8IVM0 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.37□□□□□ -1.87
CCDC50Q8IVM0 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC3.37□□□□□ -1.87
CCDC50Q8IVM0 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.37□□□□□ -1.87
CCDC50Q8IVM0 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
CCDC50Q8IVM0 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
CCDC50Q8IVM0 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.37□□□□□ -1.87
CCDC50Q8IVM0 MTND5P31-201ENST00000419366 1374 ntBASIC3.37□□□□□ -1.87
CCDC50Q8IVM0 SAGE4P-201ENST00000442271 3381 ntBASIC3.37□□□□□ -1.87
CCDC50Q8IVM0 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
CCDC50Q8IVM0 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
CCDC50Q8IVM0 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
CCDC50Q8IVM0 AC026951.1-201ENST00000559530 2459 ntBASIC3.36□□□□□ -1.87
CCDC50Q8IVM0 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.36□□□□□ -1.87
CCDC50Q8IVM0 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
CCDC50Q8IVM0 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
CCDC50Q8IVM0 RNA5SP295-201ENST00000362655 121 ntBASIC3.36□□□□□ -1.87
CCDC50Q8IVM0 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
CCDC50Q8IVM0 RNU6-921P-201ENST00000384361 107 ntBASIC3.36□□□□□ -1.87
CCDC50Q8IVM0 Y_RNA.493-201ENST00000384422 102 ntBASIC3.36□□□□□ -1.87
CCDC50Q8IVM0 SSXP10-201ENST00000402595 565 ntBASIC3.36□□□□□ -1.87
CCDC50Q8IVM0 RPL23AP47-201ENST00000408017 460 ntBASIC3.36□□□□□ -1.87
CCDC50Q8IVM0 RNU4-78P-201ENST00000410940 126 ntBASIC3.36□□□□□ -1.87
CCDC50Q8IVM0 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC3.36□□□□□ -1.87
CCDC50Q8IVM0 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC3.36□□□□□ -1.87
CCDC50Q8IVM0 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC3.36□□□□□ -1.87
CCDC50Q8IVM0 SETP8-201ENST00000435341 628 ntBASIC3.36□□□□□ -1.87
CCDC50Q8IVM0 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC3.36□□□□□ -1.87
CCDC50Q8IVM0 AC000041.1-201ENST00000439655 175 ntBASIC3.36□□□□□ -1.87
CCDC50Q8IVM0 CDC27P1-201ENST00000445384 715 ntBASIC3.36□□□□□ -1.87
CCDC50Q8IVM0 AL136126.1-201ENST00000473603 402 ntBASIC3.36□□□□□ -1.87
CCDC50Q8IVM0 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC3.36□□□□□ -1.87
CCDC50Q8IVM0 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC3.36□□□□□ -1.87
CCDC50Q8IVM0 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC3.36□□□□□ -1.87
CCDC50Q8IVM0 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC3.36□□□□□ -1.87
CCDC50Q8IVM0 AC104057.1-201ENST00000515547 497 ntBASIC3.36□□□□□ -1.87
CCDC50Q8IVM0 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC3.36□□□□□ -1.87
CCDC50Q8IVM0 AC093510.2-201ENST00000562820 896 ntBASIC3.36□□□□□ -1.87
CCDC50Q8IVM0 MIR3690-201ENST00000580266 75 ntBASIC3.36□□□□□ -1.87
CCDC50Q8IVM0 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC3.36□□□□□ -1.87
CCDC50Q8IVM0 AC022069.1-201ENST00000582910 658 ntBASIC3.36□□□□□ -1.87
CCDC50Q8IVM0 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC3.36□□□□□ -1.87
CCDC50Q8IVM0 AC069234.5-201ENST00000611056 416 ntBASIC3.36□□□□□ -1.87
CCDC50Q8IVM0 AL355365.1-201ENST00000616480 294 ntBASIC3.36□□□□□ -1.87
CCDC50Q8IVM0 AC078880.5-201ENST00000617845 421 ntBASIC3.36□□□□□ -1.87
CCDC50Q8IVM0 AC068620.4-201ENST00000636730 1182 ntBASIC3.36□□□□□ -1.87
CCDC50Q8IVM0 MEG8-222ENST00000637332 1237 ntTSL 5 BASIC3.36□□□□□ -1.87
CCDC50Q8IVM0 BX649567.1-201ENST00000642071 1134 ntBASIC3.36□□□□□ -1.87
CCDC50Q8IVM0 AC108206.1-201ENST00000570186 4159 ntBASIC3.36□□□□□ -1.87
CCDC50Q8IVM0 SGO1P1-201ENST00000603525 1447 ntBASIC3.36□□□□□ -1.87
CCDC50Q8IVM0 Z83843.1-201ENST00000604070 3685 ntBASIC3.35□□□□□ -1.87
CCDC50Q8IVM0 MTND5P24-201ENST00000438892 1767 ntBASIC3.35□□□□□ -1.87
CCDC50Q8IVM0 AC010733.2-201ENST00000589496 5702 ntBASIC3.35□□□□□ -1.87
CCDC50Q8IVM0 API5P2-201ENST00000397055 1498 ntBASIC3.35□□□□□ -1.87
CCDC50Q8IVM0 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
CCDC50Q8IVM0 U8.9-201ENST00000365667 134 ntBASIC3.35□□□□□ -1.87
CCDC50Q8IVM0 OR6K3-202ENST00000368146 996 ntBASIC3.35□□□□□ -1.87
CCDC50Q8IVM0 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC3.35□□□□□ -1.87
CCDC50Q8IVM0 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
CCDC50Q8IVM0 MIR200C-201ENST00000384980 68 ntBASIC3.35□□□□□ -1.87
CCDC50Q8IVM0 MIR16-1-201ENST00000385271 89 ntBASIC3.35□□□□□ -1.87
CCDC50Q8IVM0 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
CCDC50Q8IVM0 PTMAP2-201ENST00000397627 327 ntBASIC3.35□□□□□ -1.87
CCDC50Q8IVM0 GSTA8P-201ENST00000404253 637 ntBASIC3.35□□□□□ -1.87
CCDC50Q8IVM0 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC3.35□□□□□ -1.87
CCDC50Q8IVM0 AC063979.1-201ENST00000415539 377 ntBASIC3.35□□□□□ -1.87
CCDC50Q8IVM0 AC245054.2-201ENST00000415639 319 ntBASIC3.35□□□□□ -1.87
CCDC50Q8IVM0 MTCYBP24-201ENST00000420387 1106 ntBASIC3.35□□□□□ -1.87
CCDC50Q8IVM0 AL034347.1-201ENST00000420766 835 ntTSL 3 BASIC3.35□□□□□ -1.87
CCDC50Q8IVM0 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC3.35□□□□□ -1.87
CCDC50Q8IVM0 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
CCDC50Q8IVM0 GCA-203ENST00000429691 824 ntTSL 3 BASIC3.35□□□□□ -1.87
CCDC50Q8IVM0 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC3.35□□□□□ -1.87
CCDC50Q8IVM0 AL050341.1-201ENST00000447743 313 ntBASIC3.35□□□□□ -1.87
CCDC50Q8IVM0 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC3.35□□□□□ -1.87
CCDC50Q8IVM0 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC3.35□□□□□ -1.87
CCDC50Q8IVM0 AC012181.1-201ENST00000479895 423 ntBASIC3.35□□□□□ -1.87
CCDC50Q8IVM0 HMGB1P38-201ENST00000490557 577 ntBASIC3.35□□□□□ -1.87
CCDC50Q8IVM0 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC3.35□□□□□ -1.87
CCDC50Q8IVM0 RNF138P1-201ENST00000502765 546 ntBASIC3.35□□□□□ -1.87
CCDC50Q8IVM0 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC3.35□□□□□ -1.87
CCDC50Q8IVM0 MTND4LP22-201ENST00000508209 276 ntBASIC3.35□□□□□ -1.87
CCDC50Q8IVM0 HMGB1P1-201ENST00000522557 636 ntBASIC3.35□□□□□ -1.87
CCDC50Q8IVM0 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC3.35□□□□□ -1.87
CCDC50Q8IVM0 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.35□□□□□ -1.87
CCDC50Q8IVM0 AC006518.2-201ENST00000542513 940 ntBASIC3.35□□□□□ -1.87
CCDC50Q8IVM0 AC090616.5-202ENST00000582111 297 ntBASIC3.35□□□□□ -1.87
CCDC50Q8IVM0 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC3.35□□□□□ -1.87
CCDC50Q8IVM0 AP002906.1-201ENST00000603405 233 ntBASIC3.35□□□□□ -1.87
CCDC50Q8IVM0 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC3.35□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 81.2 ms